Lipotes vexillifer (Yangtze River dolphin): 103082960
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Entry
103082960 CDS
T03090
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lve04131
]
103082960 (VPS13A)
Membrane trafficking [BR:
lve04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
103082960 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_M
VPS13_VAB
VPS13_N
VPS13_C
Motif
Other DBs
NCBI-GeneID:
103082960
NCBI-ProteinID:
XP_007459950
UniProt:
A0A340XLQ9
LinkDB
All DBs
Position
Unknown
AA seq
2212 aa
AA seq
DB search
MTEYKIRFEVPEVLIQFCHLVGDCELPVVEINVLGLGTVIELRTFDLKVNAFLKEVCLKC
PEYFDENKKPVYLITTLDNTMEDLLTLEYVKAEKNLPITMLKGTYNNVVQLIKVNFSSLD
IHLHTEALLNTINYFNNILPYSEEKPAPVHIAETEDKGEFIKKIPLKVSKNEDIITLQIL
AELSCLQIFIQDQKHNISEIKIEGLDSEMIMRPSVTEINAKLRNIIVLDSDTAAVYKKAV
YITGKEVFSFKIVSYMGATAGSAYTDMNVFDSQVNLTVGCIEVILVTKFLYSVLAFVDNF
QAAKQALAEATVQAAEMAATGVKELAQRSSRMALDVDIKAPVVVIPQSPVSENVFVADFG
LITMKNTFHVITESQINPPPIIDLVTIKLSEMRLYRSQFINDAYQEVLDLLLPLNLEVIV
ERNLSWEWYQEVPCFNVNAQLKPMELILSQEDITTIFKTLYGNIWYEESDSASCGVIKDQ
SSVTSGATNASHHSGGTTVVTAAVVEVHSHASQVKTALNMSFRTDYLTMVLYSPGPKQTS
FTDIRDPSLKLAEFKLENIISTLKMYTDDSTFSSFSLKNCILDDKRPHVKKATPRMIGLT
VGFDKKDMMDISYRRVRDGWVADLVLQEMYICASVEFLLTVANVFLEAYTTGTAVETSVQ
TWPAKEEVLVQQSEKWEINIIIKNPEIVFVADMTRNDAPALVITTQCEICWQGDLENNTM
TAAIKDLQVRACPFLPVKRKGKITTVLQPCDLFYQATQIRTDPQVIELSVKSLTLKVSPV
IINTVITITSALYTAKETIPQETASSTAHLWEKKDTKNLKMWFLEEPNEVEKIASPTELV
PKGEIIRMNIDSIFLVLGAGIGHRTVPMLLAKSRFSGEGKNWSSLINLHCQLELEVHYYN
EMFGVWEPLLEPLEIDQTEDFRPWNLGIKMKKKAKKAIVESSTEEENYKVPEYKTVITFH
SKDQLNITLSKCGLVMLNNLVKAFTEAATGSSAAFIRDLAPFMILNSLGLSISVSPSDSF
SVLSVPMAKSYVLKNEESLSMDYIRTKDNDHFNARTSLSSKFFFILLTPANHSTADKIPL
TKVGRRLYTVRHRESGVERSIVCQIDAVEGSKKVTIRSPVQMRNHFSIPLYVYGGDTLLG
TASPGSEFNIPLASYRSLLSLKPEDEDYQMCEGIDFEEIIKNDGTFLKNCRSINPSKKPF
IINIVPEKDNLTSVSVYSEDGWDLPYIMHLWPPILLRNLLPYKIAYYIEGTEHRVFTLHE
GHSAQICTVQLDKARLHLKLLDYLNHDWKSEYHIKPNQQDISFISFTCVTEIEKTDLDIA
IHVTYNTGQTVMAFHSPYWMVNKTGRMLQYKADGIHRKHPPNYKKPVLFSFQPKHFFNNN
KVQLMVTDSELSDQFSIDTVGSHGAVKCKGLKMDYQVGVTIDLSSFNITRIVTFTPFFLL
KNKSKYRISVAEEGSDKWLSLDLEQCIPFWPEDASNKLLIQVERSEGSPKKIHFNKQESC
ILLHLDNELGGIIAEVNLAEHSTVITFSDYRDGAAPFLLINHTKNDIVQYKQSSLCEIED
SLPPGKAIFYTWADPVGSRKLKWRCGESHGEVTQKDDMMTPINLGEKTIYLVSFFEGLQR
IILFTEDPRVFKVTYESEKAELAEQEIVLALQDVGISLVNNYTKQEVAYIGITSSDVVWE
TKPKKKARWKPMSVKHTEKLEKEFKEYTESSPSEDKVIELDTNIPVHFTPSGTNMKILQP
HVIAIRRNYLPALKVEYSTSAHQSSFRIQIYRIQIQNQIHGAIFPFVFYPIKPPKSVTMD
SAPKPFTDVSIVMRSAGHSQISRIKYFKVLIQEMDLRLDLGFVYAISELMTAAEVTEKTE
VELFHKDTEAFQEEYKIVSLGDSSQVSLYEYFHISPIKLHLSVSLSSGGEEAKDSEKPEG
LVAVHSLNLLLKSIGATLTDVQDVVFKLAFFELNYQFHTTSELQSEVIRHYSKQAIKQMY
VLILGLDVLGNPFGLIREFSEGVEAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGL
AGAASKITSAMAKGVAAMTMDEDYQQKRREAMNKQPAGLREGITRGGKGLVSGFVSGITG
IVTKPIKGAQKEGAAGFFKGVGKGLVGAVTRPTGGIIDMASSTFQGIKRATETSNEVESL
RPPRFFNEDGVIRPYRLRDGTGNQMLQKIQVYREWIMTHSRSSDDDNDDDDD
NT seq
6639 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatataaaataagatttgaagtgccagaggttttgattcaattctgtcacctt
gttggagattgtgaactacctgtggtagaaattaatgttttgggattgggcacagtcatt
gagcttagaacatttgatttgaaagtaaatgcctttttgaaagaggtctgcttaaaatgc
ccagaatattttgatgaaaacaagaaaccagtttatttgattacaacactggataacaca
atggaagatctgttaacactggaatatgtgaaggctgaaaagaatttacccataacaatg
ttgaagggcacctataacaatgttgtgcaactgattaaggtgaatttttcctctttggat
attcatttacatactgaagcacttctgaatacaataaattattttaataatatccttcca
tattcggaggaaaaaccagccccagtgcatattgcagagactgaagacaaaggagagttt
attaaaaaaatacctttaaaagtatccaagaatgaagatattattaccttacagatttta
gcagaattatcatgtttacagatcttcattcaagatcagaaacataacatttcagaaatt
aagattgaagggcttgattctgagatgattatgaggccatcagtgactgaaataaatgca
aagctaaggaatataattgttctggattctgatacagcagctgtatacaaaaaggctgtt
tatattactggaaaagaagttttcagcttcaaaatcgtttcttatatgggtgcaactgct
ggttctgcgtacacagatatgaatgtgtttgacagtcaagttaatttaactgttggttgc
attgaagtaattcttgtcacaaaatttctgtattctgtattggcttttgtagataatttt
caagcagctaaacaagccttggcagaggcaactgttcaggcagcagaaatggctgctact
ggtgtaaaagaactggcacaaaggagttctagaatggcattggatgttgacatcaaagcc
ccagttgtggttatcccacagtctccagtttctgaaaatgtttttgttgctgattttgga
ctaattacaatgaaaaatacattccatgtgataacagagagtcagatcaaccccccaccc
attattgatttggtaacgataaagctgagtgaaatgagactatacaggtctcaatttatt
aatgatgcataccaggaagtactggatctactattgccactaaatcttgaggtgattgtt
gagcgaaatttatcctgggagtggtaccaggaagttccttgttttaatgtaaatgctcaa
ctaaagcccatggagttaattcttagtcaagaagatataacaactatttttaaaacatta
tatggcaacatatggtatgaagaaagtgatagtgcctcatgtggagtaataaaagatcag
tctagtgttactagtggtgctactaatgcttcacaccattcaggaggaacaactgtagtg
acagctgctgtggtagaagtacattcacatgcttcccaagttaagacagcactaaatatg
agtttcagaactgattatctcaccatggtactgtatagtccaggtcctaagcagacttca
tttacagatattcgtgatccttctctgaaacttgctgaatttaagttggagaatattata
agtactttaaaaatgtatacagatgactcaacattttcttccttctcattaaaaaactgt
attttagatgacaaaaggcctcatgtcaagaaagcaactcctagaatgataggactaaca
gttgggtttgacaaaaaggacatgatggatataagctataggagagtcagagacggttgg
gtggctgatttagtccttcaagaaatgtatatttgtgcaagtgtggaatttctgctgaca
gttgcaaatgtctttcttgaggcctacactacaggcactgctgtagaaaccagtgttcaa
acatggcctgctaaagaagaagtacttgtacagcaatcagagaagtgggaaattaatatt
attattaaaaatcctgaaattgtgtttgtggctgatatgacaagaaatgatgcccctgcc
ttagtcattacaacacaatgtgagatttgttggcaaggtgaccttgaaaataatacaatg
actgctgccattaaagatctccaagtgagagcatgcccatttcttccagtcaagagaaaa
ggaaaaatcactactgttttgcagccttgtgacttgttctatcaagctactcagatacgt
acagatccacaagtgattgaattatcagtaaaatccctgacactgaaggtgtcaccagtt
atcataaacactgtgattaccataacttcagcactttatacagctaaggaaaccatccca
caagaaactgcttcttctacagcacatttatgggaaaagaaggatacaaagaatttaaaa
atgtggtttcttgaagaaccaaatgaagttgaaaaaatagcttccccaactgaattggta
cccaaaggagagataataagaatgaatattgattctatttttctagttcttggggctgga
attggtcatcgaacagtacctatgcttttggcaaaatcacgtttctcaggggaaggcaaa
aactggagttccctaataaatctccactgtcagcttgagctagaagtacattattacaat
gaaatgtttggtgtgtgggaacctttgcttgaacccttagaaattgatcagactgaggat
tttagaccatggaatcttggaatcaagatgaaaaagaaagccaaaaaggccattgttgag
tcaagtaccgaagaagaaaattacaaggtaccagaatataaaactgtcatcactttccat
tcaaaagaccaactaaacattacattatccaaatgtggccttgtaatgttaaataattta
gtcaaggcatttacagaagctgccactggatcttcagctgccttcataagggatctagca
ccatttatgattttaaattctcttggacttagtatctctgtttcaccaagtgactctttt
agtgtgctcagcgtacctatggcaaaatcatatgtattgaaaaatgaggagagtttaagt
atggattatatccgaactaaagacaatgatcatttcaatgcaaggaccagcctaagcagc
aaattcttcttcattcttcttacacctgctaaccactctactgctgataaaatcccttta
acaaaagtgggacgacgactgtacactgtaagacacagagagtctggagttgaaagatct
attgtttgtcaaattgatgcagtggaaggaagtaagaaggtaacaattcgctccccagtg
cagatgagaaatcatttttcaataccactttatgtttatggaggggacaccttattggga
acggcttcacctggaagtgaatttaacataccattagcatcttaccgatcactcctttcc
ctgaagccagaagatgaggactatcaaatgtgtgaaggaattgattttgaagaaattata
aaaaatgatggcacttttctcaagaactgtagatctataaacccttccaagaagccattt
atcattaatattgtccccgaaaaagataatttgacatctgtgtcagtgtattcagaagat
ggttgggacttaccatatataatgcatttgtggccacctattctactccgaaatcttctt
ccttacaaaattgcttattatatagagggcactgaacatagagtttttactctacatgaa
ggccattcagcccagatttgtactgtacagttggataaagccaggctgcatttaaaatta
cttgactatcttaatcatgattggaaaagtgaatatcatataaaacctaatcaacaagat
attagtttcatcagttttacttgtgttacagaaatagaaaagactgatttagatattgct
atccatgtgacttataatactggccagacagttatggcatttcatagtccttactggatg
gtcaataaaactggtcgaatgttacagtataaagcagatggaattcatcgaaagcatcca
cctaattataaaaagccagttctcttttcttttcagccaaagcacttttttaataacaat
aaggttcagcttatggtaactgatagtgaattgtcagatcagttttcaattgatactgtt
ggtagtcatggagctgttaaatgtaagggcctgaaaatggactatcaagttggtgtcact
atagatcttagcagttttaacattaccagaattgtcacctttacacccttttttttgctt
aaaaacaaaagtaaatatcgtatatcagtggctgaagagggaagtgataaatggctctct
cttgatttggagcagtgtatccccttttggcctgaggatgcttctaataaacttcttatt
caagttgaaagaagtgaaggctctccgaaaaagatacattttaacaagcaagaaagttgt
attttattgcatctggataatgagcttggaggtattatagcagaagttaatttggctgag
cattctacagttattacattttcagattatcgtgatggagcagctccattcctgttaata
aatcacaccaagaatgacattgttcaatataagcaaagttccctctgtgaaatagaagat
tccctccctcctggaaaagcaattttttatacgtgggctgatccagtgggctctagaaag
ctgaagtggagatgtggagaaagccacggtgaagtaacacaaaaggatgatatgatgaca
cctataaatctgggggaaaagaccatttatttagtttcattctttgaaggcttacaacgc
attattttattcactgaagatccaagggtatttaaagtgacatatgaaagtgagaaagca
gagttagcagagcaagaaattgtgttggcattacaagatgttggaatttctcttgtcaac
aattatacaaagcaagaagtagcctatattggcattacaagttctgatgtggtttgggag
acaaaacccaagaagaaggcaagatggaagccaatgagtgtaaagcacactgagaagtta
gagaaagaatttaaggaatatactgaatcttcaccatcagaagataaggttattgagttg
gacactaacattccggttcacttcacacctagtggtactaacatgaaaattctgcagcca
catgtaatagctataagaagaaattaccttccagcattaaaagtagaatatagcacatct
gcacatcaatcatcatttagaattcaaatttacagaatacagatccaaaaccagatacat
ggtgctatatttccatttgtgttttaccccattaaacctccgaagtcggtcaccatggat
tcagcaccaaagccctttacagatgtcagtattgtcatgagatctgcaggacattcacag
atatcacgtattaagtatttcaaagtgttgatccaagaaatggatctcaggttggatctt
gggtttgtctatgctatatcagaacttatgacagcagctgaagtaactgaaaaaactgag
gttgagctttttcataaagatacagaagctttccaagaagaatataaaatagtttcatta
ggagattcatcacaagtcagtctctatgaatactttcatatatctcctatcaagttgcat
ttaagtgtttcactgagttcaggtggtgaagaagctaaagattcagaaaaacctgaagga
ctggtggcagttcattctttaaatcttttgctgaagagtattggtgccactcttacagat
gtacaagatgtagtttttaagcttgcattttttgaactcaactatcagttccatacaaca
tctgaactacagtctgaagtaataagacactattcaaaacaggccattaagcagatgtac
gtactcattcttggacttgatgttttgggaaatccctttggcttgattagagaattttct
gaaggtgtagaagcatttttttatgagccttaccagggagccatccagggtcctgaagag
tttgtggaaggaatggcactgggactgaaagcactagttggtggagctgttggtggatta
gctggtgctgcctccaaaatcaccagtgctatggctaaaggagtagcagctatgactatg
gatgaagactaccaacagaagagaagagaagccatgaacaagcaaccagctggtcttaga
gaaggcatcactcgtggaggaaaaggattagtttctggtttcgtaagtggcataacagga
attgttacaaaaccgatcaaaggagctcaaaaagaaggagcggctggtttctttaaaggt
gttgggaaaggtttagttggagcagtgacaaggccaactggaggcatcatagacatggct
agcagtacatttcagggaataaaaagagctacagagacttctaatgaagtggagagtctg
cgaccccctaggttctttaatgaagatggagttatcagaccttacaggttgagggatggt
actggaaatcaaatgttacagaaaattcaggtctacagggagtggattatgactcacagt
agaagtagtgatgatgataatgatgatgatgatgattag
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