Lipotes vexillifer (Yangtze River dolphin): 103083603
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Entry
103083603 CDS
T03090
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04136
Autophagy - other
lve04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103083603 (ATG4D)
04136 Autophagy - other
103083603 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lve01002
]
103083603 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lve04131
]
103083603 (ATG4D)
03029 Mitochondrial biogenesis [BR:
lve03029
]
103083603 (ATG4D)
Peptidases and inhibitors [BR:
lve01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
103083603 (ATG4D)
Membrane trafficking [BR:
lve04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
103083603 (ATG4D)
Mitochondrial biogenesis [BR:
lve03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103083603 (ATG4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
103083603
NCBI-ProteinID:
XP_007460734
UniProt:
A0A340XN77
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MNSVSPAAAQYRSGSQEDARSPEGRRPRRPRTPDPNGLGPSGASGPALASPGTGPGEPDE
VDKFKAKFLTAWNNVKYGWAVKSRTSFSKISSVHLCGRRYRFEGEGDIQRFQRDFVSRLW
FTYRRDFPPLAGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWTWSLGAGLGPPEQSG
LASPNRYRAHWMPPRWAQAAPEPEQERRHRQIVSWFADHPWSPFGLHRLVELGQSSGKKA
GDWYGPSLVAHILRKAVESCSEVTRLVVYVSQDCTVYKADVARLVARPDPTAEWKSVVIL
VPVRLGGETLNPVYVPCMKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQPT
VDVSQADFPLESFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSATE
RYPMFTLVEGHAQDHSLDDLCSQPSQPTLRLPRTGRLLKAKRPSSEDFVFL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtcgccggccgcagctcagtaccggagcggcagccaggaggacgcgcgc
agccccgagggccgcaggccacggcgcccccgaaccccggaccccaacggcctggggccc
tccggagccagcggccccgctcttgcgtcgcccgggaccggcccgggggagccggacgaa
gtggacaagtttaaagcgaagttcctgacagcctggaacaacgtcaagtacggttgggca
gtcaaaagccggaccagctttagcaagatctctagcgtccatctctgtggccgccgctac
cgcttcgagggcgagggtgacatccagcgtttccagcgggactttgtatctcgcctatgg
tttacgtaccgccgggacttcccacctctcgccgggggctgcctgacctccgactgtggc
tggggatgcatgttacggagtgggcagatgatgctagctcagggactgctgctgcacttc
ctgcccagagactggacgtggtctctgggcgcgggcctgggtccccctgagcaatcaggg
ttggcctctcccaaccggtaccgtgcccactggatgcctccgcgctgggcccaggctgcc
cctgagccggagcaggagcgccggcaccggcagattgtatcctggttcgctgaccatccc
tggtcccccttcggcctacaccggctggtggagcttgggcagagctcgggcaagaaggcg
ggtgactggtatgggccgtccctggtggcgcacatactcaggaaagctgtggagagctgc
tcagaggtcacccgcctggtggtgtacgtttctcaggactgcacagtgtacaaggcggat
gtggcacgcctggtggccaggccagaccccacagctgagtggaagtccgtggtcatcctg
gtgccagtgcggctgggtggcgagactctcaaccccgtgtacgtgccctgcatgaaggag
ctcctgcgttcagagttgtgccttggcatcatggggggcaagccacgccactcgctctac
ttcattggctatcaggatgacttcctcctctacctggaccctcactactgccagcccact
gtggatgtcagccaggctgacttccccctagagtccttccattgcacctcaccccgcaag
atggcctttgccaagatggacccgagctgtactgtggggttctatgctggagacaggaag
gagtttgagacgctctgctcagagctgaccagggtcctcagctcctcctcagccacagag
cgataccctatgttcaccctggttgagggccatgctcaggaccacagcctggacgacctc
tgctcccagccctcccaacccacactgcggctccctcgcacaggccggctcctcaaggct
aaacgcccaagctctgaggactttgtgtttttataa
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