Lipotes vexillifer (Yangtze River dolphin): 103083776
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Entry
103083776 CDS
T03090
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103083776 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103083776 (EDC4)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103083776 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
103083776 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
DUF445
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_HPS5
WDR55
Motif
Other DBs
NCBI-GeneID:
103083776
NCBI-ProteinID:
XP_007457324
UniProt:
A0A340XDQ1
LinkDB
All DBs
Position
Unknown
AA seq
1401 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAESQRPSNAYNGDLNGLLVPDPLCSGDGT
STNKTGLRTMPPINLQEKQVICLLGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSV
ADLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCP
FIPEESEDCCEEGSPTVALLHEDRAEVWDLDMLRSNHSTWPVDVSQIKQGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVVPLPTHP
AHEDFAFPTAFVESRPELASEGLGSATHGSQPDLRRIVELPAPADFLSLSSETKPKLMTP
DAFMTPSTSLQQIAASPSSSSSSSSSSSLTAVSAMSSTSAVDPSLPSRPPEELTLSPKLQ
LDGGLTMSSSSSLQASPRSLLPGLLPSPADKLPPKGPGQVPTAASTLSLELQEVEPLGLP
QASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSASEGLEPDSMASAASALHLLS
PRPRPGPELGPQLSLDGGPGDGDRHSTPSLLEAALTQEATAPDSQVWPTAPDITRETCSS
LAESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAAGGFGTKVP
TPRLPAKDWKTKGSPRASPKLKRKGKKDDGDSSMGSRLTEHQVAEAPEDWPALIWQQQRE
LVQLRHSQEELLQRLCTQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQLQ
EQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVEGS
MKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDS
FRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQGATEQMAATVSSSVRAEV
QHQLHVAVGSLQEAILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPATHLD
CQAQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVLLS
LIQQLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNS
LGKAARRLSLMLHGLMTPSLP
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggcccgcggggggtcccagtgcagagagccagcgaccatctaatgcc
tacaatggagatctcaatgggctcctggtcccagaccccctctgctcaggtgatggtact
tcaacaaacaagactggtctccgaaccatgcctcctattaacctgcaggaaaagcaggtc
atctgcctcttaggagacgacagttccacctgcatcgggattttggccaaggaggtggag
attgtggccagcagtgactctagcatctcgagcaaggcacgggggagcaataaggtgaaa
atccagcccgtcgccaagtatgactgggagcagaaatactactatggcaacctgattgct
gtgtccaactctttcttggcctatgctattcgggctgccaacaacggctcagcgatggta
cgggtgatcagtgtcagcacttcagagaggaccctgctcaaaggcttcacaggcagtgtg
gctgatctggcctttgcacacctcaattccccacagctggcctgcctggatgaggcaggc
aacctgtttgtgtggcgcttggccctggttaatggcaaaattcaagaagagatcttggtc
catatccgacagccagagggcactccactgaaccacttccgcaggatcatctggtgcccc
ttcatccctgaagagagtgaggactgctgtgaggagggcagcccaacggtggccctgttg
catgaggaccgggctgaggtatgggacctggacatgctccgctccaaccacagcacctgg
cccgtggatgtcagccagatcaagcagggcttcatcgtggtaaaaggccacagcacatgc
ctaagtgaaggggccctctcacctgatgggactgtcctggctaccgcaagtcatgatggc
ttcgtcaagttctggcagatttacattgaggggcaggatgagccaaggtgtttgcacgag
tggaagcctcacgatgggaggcccctctcctgcctcctgttctgtgacaaccacaagaaa
caggatcctgaggtccccttctggaggttccttattactggtgctgaccagaatcgggag
ctgaagatgtggtgcacggtgtcctggacctgcctgcagaccattcgcttctccccagat
atcttcagctcagtgagtgtgccccccagcctcaaggtttgcctggacctctcagcagaa
tacctgattctcagcgatgtgcaacggaaggtcctctacgtgatggaactgctgcagaac
caggaggagggccgtgcctgcttcagctccatctctgagttcctgctcacccaccctgtg
ctgagcttcggtatccaggttgtgagtcgctgccggctgcggcacactgaggtgctgcca
gccgaggaggagaatgacagcctaggggctgatgggacccacggagctggtgccatggag
tctgcagctggtgtgctcatcaagctcttttgtgtgcacactaaggcattgcaagatgta
cagatccgcttccagccacagctgaaccctgacgtggtggtcccgctccctacacaccct
gcccatgaggactttgcttttcccacagcatttgtagagtctcgaccagaactggcttct
gagggcctgggatcggccactcacggctcccagcctgacctccgacgcatcgtggagctg
cctgcacctgctgacttcctcagtctgagcagtgagaccaagcccaagctgatgacgcct
gacgccttcatgacacctagcacctccctgcagcagatcgctgcatctcccagtagcagc
agcagcagcagcagcagttcctctcttacagcggtgtctgccatgagcagtacttcggcc
gtggatccctccttgcccagcaggccacctgaggagctgaccttgagccccaagctacag
ctggatggtggtctgacaatgagcagcagcagcagcctgcaggcaagcccacgtagcctc
ctgcctggcctgctcccaagtccggccgacaaattgcctcccaaagggcccgggcaggtg
cctactgctgcctctacactatccctggagctgcaggaagtggagcccctggggctaccc
caggcgtcccccagccgcacccgctcccccgatgttatctcctcagcttccactgccctg
tcccaggatatccctgagatcgcatctgaggcgctgtcccgtggctttggctcctccgct
tcagagggcctagagccagacagtatggcctcagctgcttcagcactacacttgctgtct
ccacggccccggccgggacccgagcttggcccccagcttagcctggatggaggccctggg
gatggggatcggcatagtaccccttccctcctggaggcagccttgacccaggaggccaca
gcccctgacagtcaggtctggcctacggcaccagacattactcgtgagacctgcagcagc
ctggcagagagcccccggaatggcctccaggaaaagcacaagagcctggcctttcaccga
ccaccttatcacctgctacagcaacacgacagtcaggatgccagtgccgagcaaagcgac
catgatgatgaggtggccagcctggcctctgctgcagggggttttggcaccaaagttccc
actccacgtcttcctgccaaggactggaagaccaaaggatcccctcgggcctcacccaag
ctcaagcgaaagggcaaaaaggatgacggggattcgtccatgggatcccggctcacagag
caccaggtggcagaggcccctgaggactggccagcactaatctggcaacagcagagagag
ctggtgcagcttcggcacagccaagaagagctgctacagcgtctgtgcacccaacttgaa
ggcctgcagagcaccgtcacgggccacgtagaacgtgccctagagtcacggcacgagcag
gagcaacggcgactggagcgggcactggccgagggacagcagcgtggtgggcagctgcag
gagcagctgacgcaacagctgtcccaagcgctatcttcagctgtggctgggcggctggag
cgcagcatacgggatgagatcaagaagacggttcctccatgtgtgtctaggagtctggag
cccgtggcaggccaactgagcaactcagtggccaccaaactcacagccgtggagggtagc
atgaaagagaatatctccaagctgctgaagtccaagaacttaacagatgccattgcccga
gcagccgcagacacgttacaggggccaatgcaggccgcctaccgtgaagccttccagagc
gtggtactgcccgccttcgagaagagctgccaggccatgttccagcagatcaatgatagc
ttccgactgggcacgcaggaatacttgcagcagctggagagccacatgaagagccgaaag
gcacgagaacaggaggcgcgggagcccgtgctggcccagctgcggggcctggtcagcaca
ctgcagggagccacggagcagatggcggctaccgtgtccagcagcgttcgggctgaggtg
cagcaccagctgcacgtggctgtgggcagcctgcaagaggcaattttagcgcaggtgcag
cgcattgttaagggtgaggtgagtgtggcactcaaggagcagcaggctgccgtcacctct
agcatcatgcaggccatgcgctcagccgctggcacacctgtccctgccacccacctcgac
tgccaagcccagcaagcccatatcctgcagctgctgcagcagggccacctcaatcaggcc
ttccagcaggccctgacagctgccgacctgaacctggtgctgtacgtgtgtgaaactgtg
gacccaggccaggtttttgggcagccaccttgccccctctcccagcctgtactcctttca
ctcatccagcaactggcctctgaccttggcactcgaactgacctcaagctcagctacctg
gaagaggctgtgatgcacctggaccacagtgaccccatcactcgggaccacatgggctcc
gtcatggcccaggtgcgccagaagctcttccagttcctgcaggcggagccacacaactca
cttggcaaagcggcccggcgtctcagcctcatgctgcacggccttatgactcccagcctc
ccttag
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integrated database retrieval system
