Lipotes vexillifer (Yangtze River dolphin): 103083833
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Entry
103083833 CDS
T03090
Symbol
ARHGEF12
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04270
Vascular smooth muscle contraction
lve04360
Axon guidance
lve04611
Platelet activation
lve04625
C-type lectin receptor signaling pathway
lve04810
Regulation of actin cytoskeleton
lve05135
Yersinia infection
lve05152
Tuberculosis
lve05163
Human cytomegalovirus infection
lve05200
Pathways in cancer
lve05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
103083833 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
103083833 (ARHGEF12)
04625 C-type lectin receptor signaling pathway
103083833 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
103083833 (ARHGEF12)
09158 Development and regeneration
04360 Axon guidance
103083833 (ARHGEF12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103083833 (ARHGEF12)
05205 Proteoglycans in cancer
103083833 (ARHGEF12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
103083833 (ARHGEF12)
09171 Infectious disease: bacterial
05135 Yersinia infection
103083833 (ARHGEF12)
05152 Tuberculosis
103083833 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lve04131
]
103083833 (ARHGEF12)
Membrane trafficking [BR:
lve04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
103083833 (ARHGEF12)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
103083833
NCBI-ProteinID:
XP_007450679
UniProt:
A0A340WUD7
LinkDB
All DBs
Position
Unknown
AA seq
1563 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSTSHDFDPTGLVQRCVIIQKDD
NGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHLEVVKLIKSGSY
VALTVQGRPPGSPQFPLADSEVEPSVVGHMSPIMTSPHSPGASGNMERITSPVLMGEENN
VVHNQKVEILRKMLQKEQERLQLLQEDYSRTPAQRLLKEIQEAKKHIPQLQEQLSKATGS
AQDGAAVTSSKPLGDGLAVSEIEADPGDGLGRIDYGSGDASRPSSDSADSPKSGLKERIY
LEENPEKSEIIQDTDTQSLIGSPSTRIAPHIIGAEDDDFGTEHEQINGQCSCFQSIELLK
SRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRRIFLEFHQFFLDRSAHLKVS
VPDEISVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHLEDFRQKRSMGLTLAESELT
KIDAERDKDRVTLEKERACAEQIVAKIEEVLMTAQAVEEDKSSTMQYVILMYMKHLGVKV
KEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSILGPPRRPSRHDNSAIGRAM
ELQKQRHPKHISTPSSVSPEPQDSAKLRQSGLTSEGADIGYLPANSMSSMVSGGXXXXXL
SQEGGKENDMGSKQVGETPASGDSLDGTPRTPSTVFDFPPPPLDQVQEEEWEVERVTEHG
TPKPFRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLALKPCEIKRQEVINEL
FYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQLHIGLNEQMKAVRKR
NETSVIDQIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIKSRQKKDSRFQTFVQDA
ESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPTEREKVKKAADHCRQILNYVN
QAVKEAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKMIHEGPLVWKVNRDKT
IDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTGDSKHTFSPVIKLNTVLVRQVATDNK
ALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTKPIPLPQSPPCEGDND
EEPPKLQVEHHGISVTGLQSPDRDLGLESPLMSSKPQSHSLDTSGKSEVDDLFVAERQFA
KEQHADGTLKEVGVNYQITIPDPHLPVSEERWALDALRNLGLLKQLLVQQLGLTEKSTQE
DWPHFPRCRTASLGVQADSGTQKPDSIKAYHPCEGQMPFRTGTGDISTCYSPRTSAESSA
PRDSVVLAFQESQASNILVMDHMIMTPEMPPAEPEGGLDESGEHFFDAREAHSDDNPSEG
DGAVKKEEKDVNLRISGTCLILDGYETVQESSTDEEIASSLPPQPATGIPSMDSTRRQQR
SPQNAHSDGAVSPFTPEFLVQQRWGAMEDSCLEIRSPSSCADSQSQIMEYIRKIEADLEH
LKKVEESYTILCQRLAGSALTDKHSAKAVSPGDYRWLCVQCSNLYSFAFMLLDEAILIQK
QRC
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcaccgacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaaccgagagtcaccaacagataagaagcagaaagttgagcgcagtaca
tcacatgattttgaccccacaggtcttgttcagcgttgtgtgatcatccagaaggatgac
aatggatttgggctgacggtcagtggagacaatccagtgttcgtacagtctgtcaaagaa
gatggagcagccatgcgggctggcgtacagacaggtgatcgaatcatcaaggtgaatgga
actctggtgactcattcaaaccatttggaagtggtgaagctaatcaaatcgggttcctat
gtagctctcactgttcagggacgcccacctgggtcgccccagtttccacttgctgattct
gaagtagagccgtcagtcgttggacatatgtctcccatcatgacatcccctcattcacct
ggagcatctgggaatatggagagaattactagtcctgtgctcatgggggaggaaaacaat
gtggttcataaccagaaagtagaaattctgagaaaaatgttacagaaagaacaggaacgg
ctacagttattgcaggaagattacagccgaacacctgcccaaagattgctaaaagagatc
caagaggccaagaaacacattcctcaactgcaagagcagttatccaaagccacaggctct
gctcaggatggagctgcagttacatcctccaagccattaggcgatgggctagcagtcagt
gaaatagaagcagatcctggtgatggactaggcagaattgactatggcagtggagatgct
tctcggcccagtagtgacagtgcagatagtcccaagagtggcctgaaagagaggatttat
ctagaggaaaacccagagaaaagtgaaataattcaagacactgacactcaatcacttatt
gggagtccctctacccgtatagcacctcatattattggagcagaggatgatgactttggt
actgaacatgaacagattaatgggcagtgcagctgtttccagagcattgaactgctaaaa
tctcgccctgctcacttggctgttttcttacaccatgtagtttcacagtttgaccctgca
acattgctctgttacctctattcagacctgtataaacagaccaattccaaggagactcgt
cgtatcttccttgagtttcatcagttcttcctggatcgatctgcacacctgaaagtttct
gttcctgatgaaatatcagtagatctagaaaaaagaagacccgagcttattcctgaggat
ctacatcgccactatatccaaactatgcaagaaagagtccacccagaagttcaaaggcac
ttggaagattttcgacagaaacgtagcatggggctgacgttggctgaaagcgaactgact
aaaattgatgcagagagagacaaggaccgggtaactctggagaaggaacgggcatgtgca
gagcagattgttgccaaaattgaagaagtgttaatgactgctcaggctgtggaagaagat
aagagttcaacaatgcaatatgttattctcatgtacatgaagcatttgggagtaaaagtg
aaagaacctcgaaatttggagcacaagcgaggtcggattggattccttccaaaaatcaag
caaagtatgaagaaagatagggaaggtgaagagaaagggaagcgaagaggcttccccagc
atcttgggacccccacggagaccaagccgtcatgacaacagtgcaattggcagagccatg
gaactacagaagcagcgccaccctaagcacatatccacaccctcatctgtgagtcctgaa
cctcaggactctgctaagttgcgccagagtggattaacaagtgaaggagcagacattgga
tacctgccagccaattccatgtcctccatggtttcagggggcnnnnnnnnnnnnnntctt
tcccaggaaggagggaaagagaatgatatgggatcaaagcaagttggagaaactccagca
tctggagactccttagatggcacacctcgtactcccagtaccgtctttgacttcccacct
cctccattagaccaagtgcaggaggaggaatgggaagtggaaagggtgactgaacatggg
acaccaaagccctttcgaaagtttgacagcatagcttttggagaaagtcaaagtgaggat
gaacagtttgaaaatgacttagagacagatccacccaactggcaacagctcgttagtcga
gaagtgttattggcactaaagccttgtgagatcaaaagacaggaagtaattaatgaattg
ttctacactgaaagagctcatgttcgaacattgaaggttctagatcaagtgttctatcag
cgagtttccagagaaggaattctgtcaccttcagaactacggaaaattttttcaaactta
gaagatattcttcaacttcacattgggttgaatgagcaaatgaaggctgttcgaaagagg
aatgagacatctgttattgatcagattggggaagatttgctgacttggttcagtggaccc
ggggaggaaaagttgaaacatgctgctgctaccttttgcagtaaccaaccctttgccctg
gaaatgatcaagtctcgtcagaaaaaggattctcgattccagacttttgtacaagatgct
gagagtaatccactgtgtcgtcgtctgcagctgaaagatatcattcccacccaaatgcag
aggcttactaagtaccctcttctattggataacattgccaaatacacagaatggccaaca
gaaagggaaaaggtgaagaaagctgcagatcactgtcgtcagatcttaaattatgtaaat
caggctgttaaggaggcagaaaacaagcagcgcttagaagattatcagcgtcgccttgat
acctccaatctgaagttgtcagagtacccaaatgttgaagagctcaggaatttggattta
acaaaaaggaagatgattcacgaagggccattggtttggaaggtgaatagagataaaact
attgatctatacactttgctgctggaagatattcttgtattgttacaaaagcaggatgat
agactggtgttaaggtgtcatagtaagattctggcatctacaggtgatagcaaacacaca
tttagccctgtcatcaagttgaacacagtgttggttcgacaagtggcaacagataacaaa
gctttattcgtcatctccatgtctgacaatggagcccaaatttatgaactggtggcacag
acagtttctgaaaagactgtctggcaggacctaatctgtcggatggctgcatcagtgaag
gagcagtccacaaagccaattccactgccacagtcaccaccttgcgaaggagacaatgat
gaagaacctccaaaattacaagtggaacatcatggcatttcagtcactggtctgcagagt
ccagacagagatttgggattagagtctcctttaatgtcgtcaaaacctcaatctcattca
ctggatacctctgggaaatcggaggtggatgatctctttgtggctgagagacagtttgca
aaggagcagcatgcagatggaactctaaaggaagttggagtcaattatcagatcacaatc
ccagatccacacttgcctgtctcagaagaacggtgggcgttggatgcactaaggaatttg
ggtttgttgaagcaattgctggtacaacagctgggtttgactgagaagagcactcaggaa
gactggccacatttcccaagatgcaggacagcctctctgggggtgcaggcagacagtgga
acccagaagcctgacagtattaaggcctatcatccttgtgaaggacagatgccctttaga
actggaactggtgacatttcaacttgttacagtccacggacttcagctgaatcttctgct
ccacgggattcagtggtactggcattccaagagagccaggcaagtaacattttagtaatg
gaccacatgattatgaccccagagatgcctcccgcagagccagaagggggtcttgatgag
agtggagagcacttttttgatgcccgtgaagcacatagtgatgataatccatcagaaggt
gatggagcagttaaaaaggaagagaaggatgttaatttgcgcatctcaggaacctgtttg
atccttgatggctatgaaacagtgcaggagagctccacggatgaggagattgcttcctcg
cttcccccgcagcccgcgacaggcatcccctctatggactctacccgccggcagcagcgt
tctccccagaatgctcattctgatggggcagtttcacctttcaccccagaattcctggtc
cagcagcgctggggagctatggaggattcctgtcttgagatccggagtccctcctcttgt
gcagattcacaaagccagatcatggagtacattcgtaagatagaggctgaccttgaacac
ttaaagaaggtggaggaaagttacaccattctttgccaaaggctggctggatcagccctc
acagacaagcactcagcgaaagccgtgtcccccggtgactaccgatggctttgtgttcag
tgcagcaatttgtactcatttgctttcatgcttttggatgaggctattctgatccagaaa
caaagatgttaa
DBGET
integrated database retrieval system
