Lipotes vexillifer (Yangtze River dolphin): 103083895
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Entry
103083895 CDS
T03090
Symbol
PCDH9
Name
(RefSeq) protocadherin-9-like
KO
K16498
protocadherin delta 1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103083895 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lve01009
]
103083895 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lve04515
]
103083895 (PCDH9)
Protein phosphatases and associated proteins [BR:
lve01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103083895 (PCDH9)
Cell adhesion molecules [BR:
lve04515
]
Cadherins
Protocadherins
103083895 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Big_9
MAP17
V_ATPase_I
EphA2_TM
RCR
DUF6249
7tm_3
DUF6377
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
103083895
NCBI-ProteinID:
XP_007464925
UniProt:
A0A340Y0B5
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYDEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTFINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVIAEVFAVDTDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQVNEHFYWS
ISTAYKCPVNQY
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattcc
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagcgcc
agccttgtctacagactggtttctaaagctggggatgcccctttggtgaaagtatccagt
agcactggcgaaattttcacgacctccaatagaatagacagagaaaaactctgtgctgga
gcctcttacgatgaggagaatgagtgtttctttgaacttgaggtggtgatcctccccaat
gattttttcaggctgatcaaaattaaaataattgtcaaggataccaatgataatgccccc
atgtttccatctcctgtcatcaatatttccatcccagaaaacactttcatcaacagccgc
tttccaattccatcagcaacagatcctgacacaggcttcaatggtgtacagcattatgaa
ttgttaaatgggcagagtgtttttggactggatattgtggaaactccggaaggagagaag
tggccacaattgattgttcagcaaaacttggacagagaacagaaagatacctatgtgatg
aaaatcaaagtagaggatggaggcactccacagaaatccagcacagccatactgcaggtc
acagtaagtgatgtaaatgacaacaggccagtgtttaaagagggtcaagtggaggtgcat
attccagagaatgctcccgtaggcacctctgtaattcagctccatgccactgatgcagat
ataggcagtaatgctgaaatccggtacatttttggtgcccaggtcgcccctgcaaccaaa
agactctttgctttaaataatactactgggttgattacagttcagaggtccttagatcga
gaggagacagccattcacaaagtgacagtgctggctagtgatggcagctccactcccgct
cgagcaacggttaccatcaatgtcactgatgtaaatgataaccctccaaacatagacctc
aggtacattataagtcccatcaatggcacagtatatttgtctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacacagatgtgaatggcaaagtgatc
tgttttattgaaagagaggtcccgtttcatttgaaggcagtatacgacaaccaatatttg
ttagagacctcctctttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattctgggaagcccagtttaaatcagactgctctggtaagggttaagcttgag
gacgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttgtacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagatattgtttatcagcttggaccgaatgcctccttctttgatctggaccgaaag
acaggagttttgacagcctccagagtctttgacagagaagaacaagaaagattcattttt
acagtaactgccagggacaatgggactcctcccctccaaagccaagcggctgtgatagtt
actgttctggatgagaatgacaatagccccaagtttactcataatcattttcaatttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacagtgacagatgcagat
gctggagagaataaagctgtgactctttccattctaaatgacaatgataattttgtgttg
gatccctattctggagtcataaagtcaaatgtctcatttgatagagagcagcagagttcc
tacacttttgatgtcaaagccactgatggaggacaaccaccccgttcctctactgcaaaa
gtaactataaatgtcatggatgtcaatgacaatagtccagttgtcatttcgccaccttct
aatacttcttttaagttggtgcctctctcagccattcctggctccgtgatagcagaagtt
tttgcagtggatactgacactgggatgaatgctgaacttaagtatacaattgtgagtggg
aacaacaaaggcctgtttcggattgatccagtaacaggtaatatcactctggaagaaaaa
ccagcacctactgatgtgggcttgcaccgactggtggtcaacataagtgacctgggatac
cctaagtctctgcacacacttgtgcttgtttttctttatgttaatgacactgctggcaat
gcctcctatatctatgacttgattcgcaggactatggagaccccattggacaggaacata
ggcgatagcagccaaccctatcaaaacgaagactatctcaccatcatgatcgccattgtc
gcaggtgccatggtggtcatcgtcgtgatcttcgtcaccgttctggtgcgctgtcgccat
gcatcaagattcaaagcagctcagaggagcaagcaaggtgccgaatggatgtccccaaac
caggagaacaaacaaaacaagaaaaagaaaaggaagaaaagaaagtctcccaagagctct
cttttgaactttgttaccatcgaagagtccaaacccgatgatgcagttcacgaacccatc
aatgggacaataagcctgccggctgagctggaagagcaaagcataggtagatttgactgg
ggtccggcacctccaaccaccttcaagccgaacagccctgacctggccaagcactacaaa
tccgcttctccacagcccgctttccatcttaaaccagacactccggtttccgtgaaaaaa
catcacgtgattcaggagctcccgttggacaacacctttgtcgggggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacaggtaaatgagcacttttactggtct
ataagtactgcatacaagtgcccagtcaaccagtattaa
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