Lipotes vexillifer (Yangtze River dolphin): 103083961
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Entry
103083961 CDS
T03090
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03013
Nucleocytoplasmic transport
lve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103083961 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
103083961 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103083961 (THOC5)
03041 Spliceosome [BR:
lve03041
]
103083961 (THOC5)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103083961 (THOC5)
Spliceosome [BR:
lve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103083961 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
103083961
NCBI-ProteinID:
XP_007461235
UniProt:
A0A340XQF2
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDAAVEIEDRRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLRCKDDSVL
HLTFYYLMNLNIMTVKAKVTTATELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
QFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFPKEQPQHTVIADHSLSASHMETTMKLLK
TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHEDYTELHFTKDIM
EAGLAGDTNLYYMALVERGTAKLQAAVVLNPGYSSIPPIFQLCLNWKGEKTNNNDDNIRA
MESEVNVCYKELCGPRPGHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
LFRGPSRMKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggaatcgagcaaaaaacgaaagcccaaagtgatccgaagtgatggagctcca
gctgaagggaagcgtaatcgttctgacactgaacaggaaggtaaatactacagtgaggag
gctgaggtggacctgcgggaccctggcagagactatgagctgtacaagtacacgtgccag
gagttgcagaggctcatggcggagatccaggacctgaagagcaggggaggcaaggatgcg
gcagttgagatcgaagatcggaggatccagagctgtgtgcatttcatgactctaaaaaag
cttaaccgattagcccacatcaggttgaagaaaggaagagatcagactcatgaggccaag
cagaaagtggacgcctatcacctgcagctccagaacctgttgtatgaggtgatgcacctg
cagaaggagatcaccaaatgtctggagtttaagtcaaagcacgaagaaatcgatctggtc
agcttagaggagttttataaggaggctcctccagatatcagcaaggcggaagtcaccatg
ggagaccctcaccagcaaacccttgcacgtctggactgggagctggagcagcggaaaagg
ctggcggagaagtaccgagagtgcctgtccaacaaggagaagatccttaaggagattgaa
gtaaagaaggagtacctgagtagcctccagcctcgtctcaacagcatcatgcaggcttcc
ctaccggtgcaggagtatctgtttatgcccttcgaccaagctcacaagcagtatgagaca
gcccgacacctaccacctcccctgtatgtcctctttgtccaggccactgcgtatgggcaa
gcctgtgataagacgttgtctgtggcgattgaaggcagcgtggatgaggccaaggctctg
ttcaagcctcccgaggactcccaagatgacgagagtgactcggatgctgaggaggagcag
accacgaaacgccggcgaccaacactgggagttcagctggacgacaagcgcaaggagatg
ctgaagaggcacccgctgtccgtcatgctggacctgaggtgcaaagatgacagtgtactg
cacctgactttctactacctcatgaacctcaacatcatgacggtaaaagccaaagtgaca
accgccacagaactgatcacccccatcagtgcaggtgacttgctgtctcctgactcagtc
ctgagctgtttgtatcctggggatcatggaaagaaaactccaaatccagccaatcagtat
cagtttgataaagttggcatcctgactttgagggactacgtacttgacttagggcatccc
tatttgtgggtgcagaagctgggtggcctccacttccccaaagagcagccccagcacact
gtgatcgctgaccactctctgagcgccagccacatggagaccaccatgaaactgctgaag
accagggtgcagtcccgcttggccctccacaagcagtttgcctccctggaacacggcatt
gtgccagttaccagtgactgccagtacctcttccctgcaaaggttgtctctcgcctggtg
aagtgggtgacgattgcccatgaggattatacggagctgcattttaccaaagacatcatg
gaggcgggactggctggggacaccaatctctactatatggcactcgtggaaaggggcaca
gctaagctccaggctgccgtggtgctgaaccctggctactcctccatcccacccattttc
cagctctgtctgaactggaaaggggagaaaaccaacaacaacgacgacaatattcgggcc
atggagagtgaggtcaatgtgtgctacaaggagctgtgtggcccccggcccggccaccag
ctcttgacgaaccagctgcagcgcctgtgcgtgctgctggatgtctacctggagacggag
agccacgatgacagcgtggaggggcccaaggaatttccccaggagaaaatgtgtctgcgg
cttttcaggggccccagcaggatgaagccatttaaatataaccatcctcaaggattcttc
agccatcgctga
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integrated database retrieval system
