Lipotes vexillifer (Yangtze River dolphin): 103083964
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Entry
103083964 CDS
T03090
Symbol
PCDHB1
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin beta 1
KO
K16494
protocadherin beta
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lve04515
]
103083964 (PCDHB1)
Cell adhesion molecules [BR:
lve04515
]
Cadherins
Protocadherins
103083964 (PCDHB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
PLAC8
Ly49
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
103083964
NCBI-ProteinID:
XP_007472121
UniProt:
A0A340YEL3
LinkDB
All DBs
Position
Unknown
AA seq
814 aa
AA seq
DB search
MAIARRKLLQSRQVGLLLLFLCLSVGGAATIRYSVAEEMESGSFVANVAKDLGLEVGKLA
AHGTRLVSEGNKLHFRLHRKTGDLLVKEKLDRESRCGKADPCVLQFAVVEPLQSFRVEVR
VFDINDSAPVFLNKEPLLKIPESTPXGSRFPLQSAQDLDIGLNGLQNYTLSASEYFYLHT
CFRSHGXKYAELVLDKPLDREEQPEVNLTITAVDGGSPPKSGTAHIRVEVLDVNDHVPQF
SXLVYHAQVPENSANGSLVATVTATDLDEGSNKEITXSLAQNPEVILQTFQIDSETGEVR
LRGSLDFEAIETYDIDIQATDEGGLSAHSKVLVEVVDVNDNPPEVTVSSVPSPLPEDSPL
QTVVALFSIRDQDIRVGGKITCFLKEDLPFAVKPTFRNSYSLVTDRGMDREEVSGYNITL
VAMDTGPPTLSSETVIEVLISDINDNPPVFQEDSYILTVRENNSPAVFIGKVHAEDLDLG
ENAQITYSLLPPKSGDLSVFAYISTNSDNGKLYALRTMDYEAIQDFQFVVKATDGGFLSL
XVTVRVVVLDDNDNCPMILYPLQNGTLPCNDLVPRSAEAVYLVTKVVAVDGDXGQNSWLS
YHLFKATDPGLFSVQQQNGEIHTLRQISERDPMMQKLIVLVQDHGQPALYTTASLNILLV
DGFSEPYLQSRDPFKHPTRVNPSTKYLVISLAVLSFLFLLSVTVIFITHICQKIKYREKF
TIQEHFYDDCNFSNNLVQGGASGSISQPCPYDMSSATGTGNSEFWFLKRLMPNFPFPHGT
GEVKTEAGSSLPPDSDRNRSQGSEGHAQVSDDYM
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgcacgcagaaaactcttgcaaagcaggcaagtgggcttgcttctccttttt
ctgtgcttatctgtggggggtgcggcgaccatccgctattcggtggcagaggagatggag
agtggttcatttgtagctaacgtggctaaggacttggggctggaggtagggaagctggct
gcgcacgggacgcggctcgtttctgagggcaataaactgcatttccggctgcaccgcaag
acaggagatctgctcgtgaaggagaaactggatcgggaatcacgttgtggcaaagccgat
ccatgcgttctgcagtttgcagtggtggagccactgcagtcctttcgcgtggaggtcagg
gtatttgatatcaatgacagtgccccggttttcctaaacaaggagcctcttttaaagatt
ccggagagcacccccncgggttcacggtttcctctgcagagcgcgcaggatctggacatc
ggcctcaacggtctccaaaactacaccttgagcgccagtgagtatttctacctgcacacc
tgcttccgcagccatgggnncaagtatgccgagctagtgctggataaacccctggacaga
gaggagcagcctgaagtcaacctgacaattacagctgtggacggagggtctccgcccaag
tctggcactgcccacattcgcgtggaggttctggatgtcaatgatcatgtgccccaattc
tcttgactggtgtaccacgctcaggtaccggaaaacagtgccaatggttctttggtggct
acggtaactgccaccgacctagacgagggatccaacaaggagataactnnctctttagct
caaaacccagaagtaattctccagacgtttcagattgactctgaaactggagaggttcga
ctaagagggtccctagattttgaagcaattgaaacatatgacattgacattcaagctacc
gacgaaggaggcctctctgcccacagcaaagtcctggtggaggtggtggatgttaatgac
aatcctcctgaagttacagtctcctctgtgcccagccctctccctgaggactctccacta
cagacagtagtggcccttttctctatcagagaccaggacattcgagtgggaggaaaaatc
acttgcttcctcaaagaagaccttccctttgcagtcaaacctacattcaggaattcctac
tcactggtcactgacagaggcatggatcgggaggaggtctctggctataatatcaccctt
gttgccatggatactggaccacccactctgtcctcggagactgtgatagaggtgctaata
tctgacattaatgacaatcccccagtatttcaggaagattcctacatcttgactgttcga
gaaaacaacagccctgcagtttttattggcaaagtccatgctgaggatctagatttgggt
gagaatgcccaaataacatattctctgctgcctccaaaaagtggagatctatcagtcttt
gcttacatctccacaaattcagacaatgggaaactctatgcactgagaactatggattat
gaagccattcaagattttcagtttgtggtaaaggcaactgatgggggcttcctgtcactg
nnagttactgtcagagtggttgtcctggatgacaatgataactgcccaatgatcttgtac
ccactgcaaaatggcaccttgccctgcaatgacctggtgcctaggtctgcagaggcagtc
tacctggtgactaaggtggtggctgtggatggtgactaaggtcagaattcctggctttca
tatcatctatttaaggccactgaccctgggttattctctgttcaacaacaaaatggggaa
atccatacattgcggcagatatctgagagagaccccatgatgcagaaactgatcgttctt
gttcaggatcatggccaaccagctctttatactactgcctcacttaatatcctcctggta
gatggcttttctgagccctatctgcagtcccgggatccattcaagcatcctacaagggta
aatccatccactaaatatttggtcatttctctggctgtgctttcctttctctttctcctc
tctgtcacagtgatcttcattacacatatttgccagaagattaaatacagagaaaagttc
acaattcaagagcatttctatgatgactgtaatttctctaacaacctggtacaaggagga
gccagtggatccatatcccagccttgtccctatgacatgtcctcagccactggcactggc
aatagtgaattctggtttcttaagcgccttatgcccaacttccccttcccccatggcact
ggagaggtaaaaacagaggctggctccagtttaccaccagattctgatagaaataggtct
caggggtcagagggccatgcccaagtatctgatgactatatgtag
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