Lipotes vexillifer (Yangtze River dolphin): 103083981
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Entry
103083981 CDS
T03090
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lve04121
]
103083981 (TOPORS)
03036 Chromosome and associated proteins [BR:
lve03036
]
103083981 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lve03037
]
103083981 (TOPORS)
Enzymes [BR:
lve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103083981 (TOPORS)
Ubiquitin system [BR:
lve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103083981 (TOPORS)
UBL E3 ligases
103083981 (TOPORS)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
103083981 (TOPORS)
Cilium and associated proteins [BR:
lve03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
103083981 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
RRM_DME
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
103083981
NCBI-ProteinID:
XP_007464995
UniProt:
A0A340Y0I0
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MGSQQPPGSPLSREEGEAPLPTPAPEGRRRSRRVRLRGSCRHRPSFLGRRELATSSPAGP
APVSSEIMASAAKEFKMDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCL
HKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFATPDVRRFR
YRTTMTRERSASIYSPNSTMNRRTTTPPDSGVIFEGLGISARPRDGEIPPFMRQIAIRRP
ATADERSLRKIQEQDIINFRRTLYRAGARVRNIEDGGRYRDISAEFFRRNPACLHRLVPW
LKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFISFA
RSPFNMAAFDQHANYDCPAPSYEEGSHSDSSVITISPDEAETQELDVNVATVSQAPWDDE
TPGPSYSSSEQVHAAMSSLLNTSDSSDEELVTGRATSQMQAVQTNDDINNDSDSSSDNCV
IVGFVKPLAERTPELVELSSDSEELGSYEKMETMKAQEQEQSYSSGDSDVSRCSSPHSVL
GKDEQINKGHCDSATRIKSKKEEKQSVSLSSPRDLSSSIRGDRVYSPYTHRHRRRGRSRS
SDSCSQSRSGHDQKNHRKHHGKKRMKSRRSRSRESSRPRGRRDKKRSRTRDSSWSRRSQT
LSLSSESTSRSRSRSSDRGKRRSRSRNRDRYYLRNNYGSRYKWEYTYYSRNKDRDGYESS
YRRRTLSRAHYSRQSSSPEFRIQSFSERTNARKKNNHSERKYYYYERHRSRSLSSTRSKT
ASTGPDRVRNEKPGGKRKYKTRHLEGSNDVAQPSREFASKVKEGHYSKSSSKLDGSYKNE
SDSFSDSRSSDKETKHKRKRTRSLSVEIVYEGKATDTTRHHKKKKKKHKRKHKKHHGDNA
SRSPVVITIDSDSDKDSEVKEDTECDLSGPQHPLQNQFLVPSLGPFETKDVVTIEDEFGV
LGKECDITTLNNNLNNTNKTVDNISPQAASVEQTLDVREESTFASDLESQPSNVSYQTES
SRRLPSPRISLMSVSLGRDHDMS
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgcagcagccgccggggtctccgctctctcgcgaggagggtgaagcgcccctg
cctactcccgctcctgagggccggcggagaagtcgccgggttcgccttcgcgggtcctgc
cgtcaccgacccagctttctgggccgtagggagcttgccacgagctccccagccgggcct
gcgccggtatcctccgagataatggcatcagccgctaaggaatttaaaatggacaacttt
tcacctaaagctggcactagcaaattgcaacagacagtaccagctgatgcatctcctgat
tctaagtgtcctatatgcttggataggtttgataatgtgtcttacttagatcgctgttta
cataagttctgttttcgctgtgtacaggagtggtcaaaaaacaaagctgaatgtccacta
tgtaaacagccctttgattctattttccattctgtgagggcagaagacgacttcaaggag
tatgtcctaaggccttcatacaatggttcttttgctacccctgatgttcgacgattccgc
tatcgtacaactatgacaagggaacgaagtgcttctatttattcacctaatagtaccatg
aatagaagaacaacaactccaccagatagtggagtaatatttgaagggttaggcatttca
gcaagacctagagatggtgaaattcctccatttatgagacagattgcaatacggaggcca
gctactgcagatgaaagatctttgcggaaaattcaagaacaggatatcattaattttagg
cgaactctctatcgtgctggtgctcgagttagaaatattgaagatggtggccgctatagg
gatatttcagctgaatttttccgtagaaatccggcttgccttcacagattagtcccctgg
ttaaaacgtgaactcacagttctctttggagctcatggatcattagtgaatattgtccag
catatcatcatgagtaatgttactcgctatgacttggagagtcaggcatttgtgtctgat
ttaaggccatttttacttaatcggactgagcattttatacacgaatttatcagttttgcc
cgatctccatttaacatggcagcctttgaccagcatgcaaattatgattgtcctgctcct
tcctatgaagaaggtagccattctgattcttcagtcataacaatatctcccgatgaagca
gagacccaagagctggatgttaatgtagctactgttagtcaggcaccatgggatgatgaa
actccagggccatcttattcaagctcagagcaggtacatgctgctatgtcttccctttta
aatacttccgacagttcagatgaagaacttgtaacaggaagagccacatctcagatgcaa
gcagtacaaaccaatgatgacataaataatgacagtgattcttcttcagataattgtgtc
attgttgggtttgttaaaccactagctgagaggaccccagaacttgttgaactgtcctct
gattctgaggagttaggttcctacgagaaaatggagaccatgaaggcacaagaacaagag
cagtcttacagttctggtgatagtgatgttagtagatgttcatctccacactctgtcctt
ggaaaggatgaacaaataaataaaggtcattgtgattctgctacaagaatcaaatcaaag
aaggaagagaaacagtctgtatcattgtcctctcccagagacctgagctcatccatcaga
ggagacagagtatattccccatatacccacagacacagaaggaggggaagatccagaagt
tcagattcatgttcccagagtaggagtgggcatgatcagaagaatcataggaagcatcat
gggaagaaaagaatgaaaagcagacgatccagaagcagggagagtagcagacctagaggt
agaagagacaaaaagagatcaagaactagagatagcagttggtcaaggagaagccaaact
ctgtctctaagtagtgaaagcacaagcagatcaagatctcgtagcagtgatcgtggtaaa
agaagatcacggagcagaaatcgagatcgttactatttaagaaataattatggaagcaga
tacaagtgggagtatacttactatagtagaaacaaggacagggatggctacgaatcatct
tacaggaggaggactctgtccagagctcattattccagacaatcttcaagtccagaattt
agaattcagtctttttctgaaagaacaaatgctagaaaaaaaaataatcacagtgaaagg
aaatattactactatgaaaggcatagatcaaggagcctatctagtactagatcaaagact
gcatctacagggcctgaccgggtgagaaatgaaaagcctggcgggaaacgaaaatacaaa
acacggcatttggagggttctaacgatgtggctcaaccatctcgggaatttgcttctaaa
gtaaaggaaggtcattactcaaaatcttcatcaaaattggatggaagctacaaaaatgag
agtgacagcttttcagatagccgatcatcagacaaagagacaaagcacaaaagaaaaagg
acccggagcctaagtgtagagatagtttatgaagggaaagctaccgatacaactagacac
cataaaaagaaaaagaaaaaacataagaggaagcataagaaacaccatggcgataatgct
tcacgttccccagttgtaattaccattgacagtgacagtgataaggattctgaagtaaag
gaggatacagaatgtgaccttagtggtcctcaacaccctctacaaaaccaatttttggtt
ccttccttgggaccatttgaaactaaagatgtagttacaatagaagatgaatttggtgtc
ctaggcaaggagtgtgacattaccacacttaataacaacttgaataataccaacaaaact
gtagataatatttcaccccaggcagcttcagttgaacagactcttgatgtaagagaagag
agcacctttgcctctgatttggagagccagcccagtaatgtctcttatcaaactgagtca
tcaaggcgattgccatctccacggatatcattaatgtcagtgtctcttggtagagaccat
gatatgtcttaa
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integrated database retrieval system
