Lipotes vexillifer (Yangtze River dolphin): 103084020
Help
Entry
103084020 CDS
T03090
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103084020 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lve03021
]
103084020 (TAF5)
03036 Chromosome and associated proteins [BR:
lve03036
]
103084020 (TAF5)
Transcription machinery [BR:
lve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103084020 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
103084020 (TAF5)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103084020 (TAF5)
STAGA complex
103084020 (TAF5)
TFTC complex
103084020 (TAF5)
SAGA complex
103084020 (TAF5)
SLIK complex
103084020 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
Cytochrom_D1
eIF2A
ABM-like
PROPPIN
Late_protein_L2
Motif
Other DBs
NCBI-GeneID:
103084020
NCBI-ProteinID:
XP_007470491
UniProt:
A0A340Y9W1
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQTGDSAGEGGGGTTNNGPNGGGGNVAASSSAGGD
GGTPKPSVAVSAVAPAVAAPVPAAAPEAGAPHDRQTLLAVLQFLRQSNLREAEEALRREA
RLLEEAVAGSGAPGEADGAGAETASALLSRVTASAPGPAAPDPPVSGASGSAAVSGLATG
PAAQGKVGSVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSVGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN
CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHSDTVCSLRFS
RDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPV
VHLHFTRRNLVLAAGAYSPQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagttagagcctgagggaccg
ccgacgctgctacctccgcagacgggggacagcgctggcgagggtggcggcggcacaacc
aacaatggccccaacggcggcggtgggaacgttgcggcgtcgtcgtcggccggcggggat
ggtgggacccccaaaccctcggtggctgtctccgccgttgccccggcggtggcggccccg
gtgcccgccgctgctccggaggccggcgctccgcacgaccgacagactctgctggccgtg
ctgcagtttctacggcagagcaacctccgcgaggccgaagaggcgctgcgccgtgaggcc
cggctgctggaggaggcagtggcgggctccggagccccgggagaggcggacggcgccggc
gctgagacggctagcgcgcttcttagtcgggtcaccgcctcggcccccggccctgcggcc
cccgaccctccggtcagcggtgcttcggggtccgctgccgtctcgggcttagcgacaggt
cctgcggctcaggggaaagttggaagtgtagctgtggaagaccagccggatgtcagtgcc
gtgctatcagcctacaaccaacaaggagaccccacaatgtatgaagaatactatagtgga
ctgaaacacttcattgaatgttccttggactgccatcgggcagagttatcccaactcttt
tatcccctatttgtacacatgtatttggaactagtctacaatcaacatgagaatgaagca
aaatcattctttgagaagttccatggagatcaggaatgttattaccaggatgacctacga
gtattatctagtcttaccaaaaaggaacacatgaaagggaatgagaccatgttggatttt
cgaacaagtaaatttgttctgcgtatttcccgagactcgtaccaactcttgaagaggcat
cttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgac
atctttgatgggatgccgcgtagtaagcaacagatagatgcgatggtgggaagtttggca
ggagaggctaaacgagaggcaaacaaatcaaaggtattttttggtttattaaaagagcca
gaaattgaggtgcctttggatgatgaggatgaagaaggagaaaatgaagaaggaaaacct
aaaaagaagaagcctaaaaaagatagtgtcggctccaaaagcaaaaaacaagatcctaat
gctccacctcaaaacagaatccctcttcctgagttgaaagattcagataaattggataag
ataatgaatatgaaagaaaccaccaaacgagtacgccttgggccagactgtttaccctca
atttgtttctatacattcctcaatgcttaccagggcctcactgcagtggatgtcactgat
gattctagtttgattgctggaggttttgcagattcaactgtcagagtgtggtctgtgaca
cccaaaaagcttcgtagtgtcaaacaagcagcagatcttagcctcatagataaagaatct
gatgatgtcttagaaagaatcatggatgagaaaacagcaagtgagttgaagattttgtat
ggtcacagtgggcccgtctatggagccagcttcagtccagataggaactacctgctttcc
tcttcagaagatggaactgttagattgtggagtcttcaaacatttacctgcttggtggga
tataaaggacacaactatccagtgtgggacacacagttttctccatatggatattatttt
gtgtcagggggccacgaccgagtagctcggctctgggctacagatcactatcagccttta
aggatatttgctggccatcttgctgatgtgaattgtaccagattccatcccaattctaat
tatgttgctacgggctctgcagacagaactgtgcggctctgggatgtcctgaatgggaac
tgtgtaaggatcttcactggacacaagggaccaattcattccttgacattttctcccaat
gggagattcctggctacaggagcaacagatggcagagtactcctttgggatattggacat
ggtttgatggttggagaattaaaaggccacagtgatacagtctgttcacttagatttagt
agagatggtgaaattttggcatcaggttcaatggataatacagtacggttatgggatgct
atcaaagcatttgaagatttagagactgatgactttactacagccactgggcatataaat
ttacctgagaattcacaggagttattgttgggaacatatatgaccaaatcaacaccagtt
gtacacctccattttactagaagaaacttggttctagctgcaggagcttatagtccacaa
taa
DBGET
integrated database retrieval system
