Lipotes vexillifer (Yangtze River dolphin): 103084224
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Entry
103084224 CDS
T03090
Symbol
FN1
Name
(RefSeq) LOW QUALITY PROTEIN: fibronectin
KO
K05717
fibronectin 1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04151
PI3K-Akt signaling pathway
lve04510
Focal adhesion
lve04512
ECM-receptor interaction
lve04810
Regulation of actin cytoskeleton
lve04820
Cytoskeleton in muscle cells
lve04933
AGE-RAGE signaling pathway in diabetic complications
lve05100
Bacterial invasion of epithelial cells
lve05135
Yersinia infection
lve05146
Amoebiasis
lve05165
Human papillomavirus infection
lve05200
Pathways in cancer
lve05205
Proteoglycans in cancer
lve05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103084224 (FN1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103084224 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103084224 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103084224 (FN1)
04810 Regulation of actin cytoskeleton
103084224 (FN1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103084224 (FN1)
05205 Proteoglycans in cancer
103084224 (FN1)
09162 Cancer: specific types
05222 Small cell lung cancer
103084224 (FN1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103084224 (FN1)
09171 Infectious disease: bacterial
05135 Yersinia infection
103084224 (FN1)
05100 Bacterial invasion of epithelial cells
103084224 (FN1)
09174 Infectious disease: parasitic
05146 Amoebiasis
103084224 (FN1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103084224 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lve04131
]
103084224 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lve04147
]
103084224 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
lve00536
]
103084224 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
lve04990
]
103084224 (FN1)
Membrane trafficking [BR:
lve04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
103084224 (FN1)
Exosome [BR:
lve04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
103084224 (FN1)
Glycosaminoglycan binding proteins [BR:
lve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103084224 (FN1)
Domain-containing proteins not elsewhere classified [BR:
lve04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
103084224 (FN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
fn2
Fn3_Dep-1_2nd
NDNF
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
103084224
NCBI-ProteinID:
XP_007456470
UniProt:
A0A340XBS1
LinkDB
All DBs
Position
Unknown
AA seq
2483 aa
AA seq
DB search
MLGDPGPRLLLLLTVLSLGTAVPSTGASKSKRQAQQVIQPQSPLAVSQSKPGCYDNGKHY
QINQQWERTYLGSALVCTCYGGSRGFNCESKPEPEETCFDKYTGNTYRVGDTYERPKDSM
IWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTC
KPIAEQCFIXXXXDHAAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQ
DTRTSYRIGDTWRKKDNRGNLLQCICTGNGRGEWKCERHTTLQTTSAGSGSFTDVRTAIY
QPQPHPQPAPYGHCVTDSGVVYSVGMQWLKAQGNKQMLCTCLGNGVSCQETAITQTYGGN
SNGEPCVLPFTYNGRTFYSCTTEGRQDGHLWCSTTSNYEQDQKYSFCTDHTVLVQTRGGN
SNGALCHFPFLYNNQNYTDCTSEGRRDNMKWCGTTRNYDADQKFGFCPMAAHEEICTTNE
GIMYRIGDQWDKQHDMGHMMRCTCVGNGRGEWTCVAYSQLRDQCIVDDITYNVNDTFHKR
HEEGHMLNCTCFGQGRGRWKCDPIDQCQDSESRTFYQIGESWEKFLHGVRYQCYCYGRGI
GEWGCQPIQTYPGSTGPVQVIITETPSQPNSHPIQWNAPEPSHISKYILRWKPKNSPDRW
KEATIPGHLNSYTIKGLRPGVVYEGQLISVQHYGQREMTRFDFTTTSTSPVVTSNTVTGE
TTPFSPVVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATS
VNIPDLLPGRKYIVNVYQISEEGEQSLILSTSQTTAPDAPPDPTVDQVDDTSIVVRWSRP
QAPITGYRIVYSPSVEGSSTELNLPETANSVTLSDLQPGVQYNITIYAVEENQESTPVFI
QQETTGVPRSDKVPPPRDLQFVEVTDVKITIMWTPPESTVTGYRVDVIPVNLPGEHGQRX
XXSRNTFAEVTGLSPGVTYHFKVFAVNHGRESKPLTAQQTTKLDAPTNLQFINETDTTVI
VTWTPPRARIAGYRLTVGLTRGGQPKQYNVGPSSTQYPLRNLQPGSEYSATLVAVKGSQQ
SPRATGVFTTLQPLGSIPPYHIEVTETTIVITWTPAPRIGFKLGVRPSQGGEAPREVTSD
SGSIVVSGLTPGMEYIYTISVLKDGQERDTPIVKKVVTPLSPPKNLHLETNPDTGVLTVS
WERSATPDITGYRITTTPTNGQQGYSLEEVVHADQSSCTFENLSPGLEYNVSVYTVKDDK
ESVPISDTIMPEVPQLTDLSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED
FVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTNVGPDTM
RVTWAPPPSIELTNLLVRYSPVKNEEDVAELSVSPSDNAVFLTNLLPGTEYLVSVSSVYE
QHESVPLRGRQKTGLDSPTGLDFSDITANSFTVHWIAPRATITGYKIRHHPEHMSGRPRE
DRVPPSRNSITLTNLNPGTDYVVSIVALNGKEESPSLVGQQTTVSDVPRDLEVIAATPTS
LLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGADYTITVYAVTG
RGDSPASSKPISIDYRTEIDKPSQMQVTDVQDNSISVRWLPSSSPVTGYRVTTTPKNGPG
PSKTMTAGPDQTEMTIEGLQPTVEYVVSVYAQNRNGESQPLVQTAVTNIDRPKGLAFTDV
DVDSIKIAWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEEETAELQGLRPGSEYTVSVV
ALHDDMESQPLIGTQSTAIPAPTNLKFTQVSPTSLAAQWTAPNVQLTGYRVRVTPKEKTG
PMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVT
DATETTITISWRTKTETITGFQVDAIPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIHL
YTLNDNARSSPVVIDASTAIDAPSNLHFLATTPNSLLLSWQPPRARITGYIIKYEKPGSP
PRELVPRPRPGVTEATITGLEPGIEYTIQVIALKNNQKSEPLIGRKKTDELPQLVTLPHP
NLHGPEILDVPSTVQKTPFITNPGYDTGNGIQLPGTSGQQPSLGQQMIFEEHGFRRTTPP
TMASPVRHRPRPYPPNVNEEIQIGPVPRGDVDHHLYPHVLGLNPNASTGQEALSQTTISW
TPFQESSEYIISCHPVGIDEEPLQFRVPGTSASATLTGLTRGATYNIIVEAIKDQKRHKV
REQVVTVGNSVDQGLNQPTDDSCFDPYTVSHYAIGEEWERLSESGFKLSCQCLGFGSGHF
RCDSSKWCHDNGVNYKIGEKWDRQGENGQMMSCTCLGNGKGEFKCDPHEATCYDDGKTYH
VGEQWQKEYLGAICSCTCFGGQRGWRCDNCRRPGAEPGHEGSTGHSYNQYSQRYHQRTNT
NVNCPIECFMPLDVQADREDSRE
NT seq
7452 nt
NT seq
+upstream
nt +downstream
nt
atgctcggggatccggggccccggctgctgctgctgctgaccgttctgtccctggggaca
gcggtgccctccactggagcctcgaagagcaagaggcaggctcagcaggtcattcagccc
cagtccccgttggctgtcagccaaagcaagcctggttgttatgacaatgggaaacactat
cagataaaccaacaatgggagcgcacctacctgggcagtgccttggtctgcacctgttat
ggaggaagccggggctttaactgcgagagcaagcctgaacctgaagagacttgctttgac
aagtataccgggaacacttaccgggtgggcgacacttacgagcgccctaaggactccatg
atctgggactgcacctgcattggggctgggcgagggagaataagctgcaccattgcaaac
cgctgccatgaagggggtcagtcctacaagattggtgacacctggaggagaccacacgag
actggtggttacatgttggagtgtgtgtgtctcggtaatgggaaaggagaatggacctgc
aaacccatagctgagcaatgttttatcnnnnnnnnnnttgatcacgctgctgggacttcc
tatgttgtcggggagacctgggaaaagccttatcaaggctggatgatggtggattgtact
tgtctgggagaaggcagtggacgcatcacctgtacctccagaaacagatgcaacgatcag
gacactaggacatcctatagaattggggatacctggcgcaagaaggacaatcgggggaac
ctgctccagtgtatctgcactggcaacggccgtggcgagtggaagtgtgagaggcacaca
accctgcagaccacgtctgctggttctggctccttcacagatgtccgaacggccatttac
cagccacagcctcacccccagccagctccatacggtcactgtgtcacagacagcggtgtg
gtttactccgtgggcatgcagtggttgaaggcacaaggaaataagcaaatgctttgcact
tgcctgggcaatggagtcagctgccaagagacagctataacccagacttatggtggcaat
tcaaatggggagccttgcgtcctaccattcacctacaatggcaggactttctactcctgc
accacagaagggcgacaggatggacatctctggtgcagcacaacttccaattatgagcaa
gaccagaaatactctttctgtacagaccatactgttttggttcaaactcgaggtgggaat
tccaatggtgccttgtgccactttcccttcctgtacaacaaccaaaactacaccgattgt
acatccgagggcaggagggacaacatgaaatggtgtggaaccacacggaactatgacgct
gaccagaagtttggattctgccccatggctgcccacgaggaaatctgtacaaccaatgaa
gggatcatgtatcgcattggagatcagtgggacaagcagcatgatatgggccacatgatg
agatgcacatgtgttgggaacggtcgtggagaatggacatgtgtcgcctactcccagctc
cgagatcagtgcatcgtcgacgacatcacatacaatgtgaatgacacattccacaaacgt
cacgaagagggacacatgctgaattgtacctgcttcggtcagggcaggggccggtggaag
tgcgatcccattgatcaatgccaggattcagaatcccgtaccttttatcaaattggagaa
tcatgggagaagtttttgcatggagtcaggtaccagtgctactgctatggccgtggcatt
ggggagtggggctgccagcccatacagacctatccaggttcaactggtcctgtccaagta
ataatcactgagacccccagtcagcccaactctcaccccatccaatggaatgcaccagaa
ccatctcacatttccaagtacattctcagatggaaacctaaaaattctccagaccgttgg
aaggaagccaccattccgggccacttaaactcctacaccatcaaaggcctgaggccaggt
gtggtatacgagggccagctcatcagcgtccagcactatggccaaagagagatgacacgc
ttcgacttcaccaccaccagcacaagcccagtggtgaccagcaacaccgtgacgggagag
acaacaccgttttctcctgttgtggccacctccgaatccgtgactgaaatcacagccagc
agctttgtggtctcctgggtctcggcttccgacactgtgtccggattccgggtggagtat
gagctgagtgaagagggagatgaaccacagtacctggatcttcccagcacagccacttct
gtgaacatccctgacctgcttcctggccgaaagtacatcgtcaacgtctatcagatatcc
gaagaaggagaacagagtttgatcctgtctacctcacagacaacagcacctgatgcccct
cctgatcctaccgtggaccaggttgatgacacctccattgtcgttcgctggagcagaccc
caggcgcccatcacaggatacagaatcgtctattccccatcagtagagggtagtagcaca
gaactcaaccttcctgaaactgccaactctgtcactctcagtgacttgcagcctggtgtt
cagtataacatcactatctatgctgtggaagaaaatcaagagagtactcctgtcttcatc
caacaagaaaccactggcgtcccacgttcagataaggttccccctcccagggacctgcag
tttgtggaggtgacggacgtaaagatcaccatcatgtggacaccccccgagagcacggtg
accggttaccgagtggacgtgatccccgtcaacctgcccggggaacacgggcagaggnnn
nnnnnnagcaggaacacatttgcagaagtcactgggctgtcccctggggtcacctatcac
ttcaaagtcttcgccgtgaaccacgggagggagagcaagcctctgacggcacaacagacg
accaaattggatgctcccaccaacctccagtttatcaatgaaactgacaccaccgtcata
gtgacctggactccacctcgtgcccggatagccgggtaccgactgactgtgggcctgacc
cgtggaggccagcccaagcagtacaacgtgggtccctcgtccacgcagtatccactgagg
aatctgcagcctggctctgagtactctgcaaccctcgtggccgtgaaaggcagccagcag
agccccagagccactggagtcttcaccactctgcagccccttggctccatcccaccttac
cacatagaagtgactgaaaccaccattgtgattacatggacgcctgctccaaggattggt
tttaagctgggtgtacgaccaagccagggaggggaagcaccacgagaagtgacctcagac
tcgggaagcatcgttgtgtctggcctgactccaggcatggaatacatttacaccatctca
gtcctgaaagatgggcaagagagagatacaccaattgtgaagaaagtggtgacaccactg
tctccaccaaagaacttgcacctggaaacaaaccccgacactggtgtgcttactgtctcc
tgggagaggagtgccaccccagacattactggctatagaattaccaccacccctacaaat
ggccaacagggatattctttggaagaagtggtccatgccgatcagagttcctgcactttt
gaaaacctgagtcctggcctggagtacaatgtcagtgtttacacagtcaaagatgacaag
gaaagtgtccctatctctgataccatcatgccagaggtgccccaactcactgacctaagc
tttgttgatataaccgattcaagcatcggcctgaggtggaccccgctaaactcttccacc
attattgggtaccgcatcacagtagttgcggcaggagaaggtatccctatttttgaagat
tttgtggactcctcagtaggatactacacagttacagggctggagcctggcattgactat
gacatcagcgttatcactctcattaatggcggagagagtgcccctactacactgacacaa
caaaccgctgtccctcctcccactgacctgagatttaccaatgttggtcccgacacgatg
cgtgtcacctgggccccacctccatccattgaattgaccaacttactggtgcgctactca
cctgtgaaaaatgaggaggatgttgcagaattgtcagtttctccttcagacaatgcagtg
ttcttaacaaatctcctgcctggcacagagtatttagtcagcgtctccagtgtttacgag
cagcacgagagcgtacctcttagaggaagacagaaaactggtctcgattccccaactggc
cttgacttttctgatatcactgccaactctttcactgtccattggattgctcctcgagct
accatcaccggctacaagatccgccatcatcctgagcacatgagtggaagacctcgggag
gatcgagtgcccccctctcggaattccatcactctcaccaatctcaatccgggcacagat
tatgtggtcagcattgtcgctcttaatggcaaagaggaaagtccttccttggttggccag
caaacaacagtttctgatgttccaagggacctggaagtcattgctgcaacccccactagc
ctgttgatcagctgggatgctccggccgtcacagtgagatattacaggatcacctatgga
gaaacaggaggaaatagccctgtccaggagttcactgtgcctgggagcaagtctacagct
accatcagtggtcttaaacctggagcagactacaccatcactgtttatgctgtcactggc
cgtggggacagcccggcaagcagcaagcccatttccattgattaccgaacagaaattgac
aaaccatcccagatgcaagtgactgatgtccaggacaacagcattagtgtcaggtggctg
ccttcaagttcccctgttaccggttacagagtgaccactactcctaaaaatggcccagga
ccatcgaaaacaatgactgcaggtccagatcaaacagaaatgacaattgaaggcttgcag
cccacagtggagtatgtggttagtgtctacgctcagaatcgaaacggagagagtcagcct
ctggttcagacagcagtaaccaacattgatcgccctaaaggactggcattcactgatgtg
gatgtcgattccatcaaaattgcttgggaaagcccacaggggcaagtttccaggtacagg
gtgacctactcgagccctgaggatggaatccatgagctattccctgcacctgatggtgaa
gaagagactgcagagctgcaaggcctcaggccgggttctgagtacacagtcagtgtggtt
gccttgcacgatgatatggagagccagcccctgattggaacccagtccacagccattcct
gcaccaaccaacctgaagttcactcaggtttcaccaaccagcctggccgcccagtggacg
gcacccaatgttcagctcactggatatcgagtgcgagtgacccctaaggagaagacggga
ccaatgaaagaaatcaaccttgctcccgatagctcatctgtggttgtatcaggactcatg
gtggccactaaatatgaagtgagtgtctatgctcttaaggacactttgacaagcagacca
gctcagggagtcgtcacgactctggagaatgtcagccctccaagaagggcccgtgtgaca
gatgctactgagaccaccatcaccattagctggagaaccaagactgagacgatcaccggc
ttccaagtcgatgccatcccagccaatggccagactccaattcagagaaccatcaagcca
gatgtcagaagctacaccatcacaggtttacaacccggcactgactacaagatccacttg
tacaccttgaatgacaatgcccggagctcccctgtggtcatcgacgcctctactgccatt
gatgcaccatccaacctgcatttcctggctaccacacccaactccctgctgttatcatgg
cagccgcctcgtgccaggattactggctacatcatcaagtatgagaagcccgggtcccct
cccagagaactggtccctcggccccgccctggtgtcacagaagctactattactggtctg
gaaccaggaatcgagtacacaatccaagtcattgccctcaagaacaatcagaagagtgag
cctctgatcgggaggaaaaagacagatgagcttccccaactggtaacccttccacacccc
aatcttcatggaccagagatcctggatgttccctccacagttcaaaagacccctttcatc
accaaccctgggtatgacactggaaacggtattcagcttcctggcacttctggtcagcag
cccagtcttgggcaacaaatgatctttgaggagcatggttttaggcgaaccacaccgccc
acaatggccagccccgtaaggcataggccaagaccgtatccaccgaatgtaaatgaggag
atccaaattggtcctgtccccaggggagacgtagaccatcatctctaccctcacgttctg
ggactcaatccaaatgcttctacaggacaagaagctctctctcagacaaccatctcatgg
accccattccaggaaagctctgagtatatcatttcatgtcatccagttggcattgatgaa
gaacccttgcagttccgagttcctggaacttctgctagtgccaccttgacgggtcttacc
agaggggccacctacaacatcatagtggaggcaataaaagaccagaagaggcacaaggtt
cgggagcaagtagttaccgtgggcaattctgttgaccaaggcctaaaccaaccaacggat
gactcgtgcttcgacccctacacggtttcccattatgccattggagaggagtgggagcga
ttgtctgaatctggctttaaactctcatgccagtgcttaggctttggcagtggtcatttc
agatgtgattcatctaaatggtgccatgataatggtgtgaactacaagattggagagaag
tgggatcgtcagggagaaaatggccagatgatgagctgcacgtgtcttggaaatggaaaa
ggagaattcaagtgcgatccccatgaggcaacgtgttacgacgatgggaagacgtaccac
gtgggagaacagtggcagaaagagtatcttggtgccatttgctcctgcacgtgcttcgga
ggccagcggggctggcgctgtgacaactgccgcagaccaggggctgaacccggtcacgaa
ggctcaactggccactcctacaaccagtattcgcagagataccatcagagaacaaatact
aatgtcaactgcccaattgagtgcttcatgcctttagatgtacaggctgacagagaagat
tcccgagagtaa
DBGET
integrated database retrieval system
