Lipotes vexillifer (Yangtze River dolphin): 103084506
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Entry
103084506 CDS
T03090
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8 isoform X1
KO
K12856
pre-mRNA-processing factor 8
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103084506 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lve03041
]
103084506 (PRPF8)
Spliceosome [BR:
lve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103084506 (PRPF8)
Complex C
U5 SnRNP specific factors
103084506 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
103084506
NCBI-ProteinID:
XP_007454276
UniProt:
A0A340WYY7
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccttaccgagggccgggtaacccggtgcctggccctctagccccg
ctgccagactacatgtcggaggagaagcttcaggagaaagcccgaaaatggcagcaattg
caggccaagcgctatgcggaaaagcggaagtttggatttgtggatgctcagaaagaagac
atgcctccagaacatgtcaggaagatcattcgagaccatggagacatgaccaacaggaag
tttcgccatgacaaaagggtgtacttgggtgccctaaagtacatgccccatgcagtcctc
aaactcctggagaacatgcctatgccttgggagcagattcgggatgtgcctgtgctgtac
cacatcactggagccatttcctttgtcaatgagattccctgggttattgaacctgtctac
atctcccagtgggggtcaatgtggattatgatgcgtcgagaaaaaagagacaggaggcat
ttcaagaggatgcgtttccccccttttgatgatgaggagccgcctttggactatgctgac
aacattttagatgttgagccactggaggcaattcagctagagctggaccctgaggaagat
gccccggtgttggactggttctatgaccaccagccattgagggacagccggaagtatgtg
aatggttccacttaccaacgctggcagttcacactgcctatgatgtccactctctaccgc
ctggccaatcagctcctgacagacttggtagatgacaattacttctatctgtttgatctg
aaggccttttttacctccaaggccctcaatatggccattcctggaggccccaaatttgag
cctcttgtccgagacatcaacctacaggatgaagactggaatgaattcaatgatattaac
aagatcattatccggcagcccatccgcactgagtacaagattgcttttccttacttgtac
aacaaccttccacaccatgtccacctcacctggtaccacactcctaatgttgtgttcatc
aaaactgaggatcctgatttgccagctttctactttgatcctttgatcaacccaatttcc
cataggcactctgtcaagagtcaggaaccattgccagatgacgacgaggagtttgagctc
ccagagtttgtggagcccttcttgaaagacacacccctctacacagacaatacagccaat
ggcattgccctgctttgggccccacggcccttcaacctacgctctggtcgcacccgccgg
gccctagacattccccttgtcaagaactggtatcgggagcattgtcctgctgggcagcct
gtgaaagtgagggtctcctaccagaagctgcttaagtactatgtgctgaatgccctgaag
caccggccccctaaagcgcaaaagaagaggtatctgttccgttccttcaaagccaccaaa
ttctttcagtctacaaagctggactgggtggaggtggggctacaggtttgccgccagggc
tacaacatgctcaaccttctcattcaccgcaaaaatctcaactatctgcacctggactac
aacttcaacctcaagcctgtcaagacactcaccaccaaggagcgaaagaaatctcgtttt
gggaatgctttccatctgtgtcgagaggttctgcgcttaactaagctggtggtggacagt
cacgtgcagtatcggttgggcaatgtggatgccttccagctggcagatgggttgcagtat
atctttgcccacgtggggcagctgacgggcatgtaccggtacaaatataagctgatgcgc
cagattcgcatgtgcaaggacctgaagcatctcatctattaccgcttcaacacgggccct
gtagggaagggccctggctgtggtttctgggctgctggctggcgagtctggctgtttttc
atgcgtggcatcacccctttgctggagcgatggctgggtaacctcctggcccggcagttt
gaaggccgacactcaaagggggtggcaaagaccgtaacaaagcagcgagtggagtcacat
tttgaccttgagcttcgggcagctgtgatgcatgacattctggacatgatgcctgagggg
atcaaacagaacaaggcccggacaatcctgcaacacctcagtgaagcctggcgctgctgg
aaggccaatattccctggaaggtccctggtttgccaacacctatagagaatatgatcctt
cgatacgtgaaggccaaggctgactggtggaccaacactgcgcactacaaccgagaacgg
atccgccgtggggccactgtagacaagactgtttgcaaaaagaacctgggacgcctcact
cggctctacctgaaggcagaacaagagcggcagcacaactacctaaaggacgggccttac
atcacagcagaagaagcggtggcagtgtataccaccactgtgcattggctggaaagccgt
aggttctcacccatcccattccccccactgtcctacaagcacgacaccaagttgctcatc
ttggccttggagcggctcaaggaagcttacagtgtgaagtctcggttaaaccagtcgcag
agggaggagctaggtctgatcgagcaagcctatgacaacccccatgaggcactgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaagaagtgggcattgagttcatggat
ctctatagccacctggtgccagtgtatgatgtagagccactggagaagataactgatgcc
tacctggaccagtacctgtggtatgaagctgacaagcgccgccttttcccaccctggatc
aagcctgctgacacagaaccacctcctctgcttgtttacaagtggtgccaaggcatcaat
aacctgcaggacgtgtgggagacaagtgagggcgagtgcaacgtcatgctggagtcccga
tttgagaagatgtatgagaagatagatttgaccctgcttaatcggctgctgcgcctcatc
gtggaccacaacatagccgactacatgacagccaagaacaatgttgtcatcaactacaag
gacatgaaccatacgaattcatatgggatcattagaggcctgcagtttgcctcattcatc
gtacagtactatggcttggttatggatttgcttgtgttgggattgcaccgggccagtgag
atggctgggccccctcagatgccaaacgattttctcagtttccaagacatagccactgag
gctgcccaccccatccgtcttttctgcagatacatcgatcgcatccatatttttttcagg
ttcacagcagatgaggctcgggacctgatccagcgttacctgacagagcaccctgacccc
aacaatgaaaacatcgttggctataataacaagaaatgctggccccgagacgcccgcatg
cgcctcatgaagcatgatgtcaacttgggtcgggcagtgttctgggacatcaagaaccgt
ctgccacgctcagtgactacagttcagtgggagaacagcttcgtgtccgtgtacagtaag
gacaaccccaacctgctgttcaacatgtgtggttttgagtgccgcatcctgcctaaatgc
cgcaccagctatgaggagttcacccacaaggatggggtctggaacctacagaatgaggtt
actaaagagcgaacagctcagtgtttcctgcgtgtggatgatgagtcaatgcagcgcttc
cacaaccgtgtgcgtcaaattctgatggcctctggctccaccaccttcaccaagattgtg
aataagtggaacacagctcttattggccttatgacctactttcgggaggctgtggtgaac
acccaggagctcctggacttgctggtgaagtgtgagaacaagatccagacacgaatcaag
attggcctcaactccaagatgccgagtcgcttcccccctgtcgtgttctacacccctaag
gagttgggtggacttggcatgctctcaatgggccatgtgctcatcccccaatctgacctc
aggtggtccaagcagacagatgtaggtatcacacactttcgttcaggaatgagccatgaa
gaagaccagctgattcccaacttgtatcgctacatacagccctgggagagtgagttcatt
gattctcagcgggtctgggctgagtatgcactcaagagacaagaggccattgcgcagaac
agacgactgaccctagaagatctagaggattcgtgggatcgtggcattcctcgaatcaac
accctcttccagaaggaccggcacacactggcttatgataagggttggcgtgtccgaact
gactttaagcagtaccaggttttgaagcagaaccctttttggtggacacaccagcggcat
gatggaaagctctggaacctgaacaactaccgtacagacatgatccaggccctcggtggt
gtggaaggcattctggaacacactctcttcaagggcacttacttccctacctgggagggg
cttttctgggagaaggccagtggttttgaggagtctatgaagtggaagaaactaaccaat
gctcagcgatcaggattgaaccagattcccaatcgtagattcacgctctggtggtcccca
accatcaaccgagccaacgtatacgtaggctttcaggtgcagctggacctgacaggtatc
ttcatgcatggcaagatccccacactgaagatctctctcatccagatcttccgagctcac
ttgtggcagaagatccacgagagcatcgttatggacttgtgtcaggtgtttgatcaggaa
ctggatgcactggaaattgagacagtacaaaaggagacaatccacccccgaaagtcctat
aagatgaactcttcctgtgccgatatcctgctctttgcctcctataagtggaatgtctcc
cggccctcattgctggcagactctaaggatgtgatggacagcaccaccactcaaaagtat
tggattgacatccagctgcgctggggggactatgattcccatgacattgagcgctacgcc
cgggccaagttcttggactacaccacagacaacatgagtatctacccttcgcccacaggt
gtgctcattgccatcgacctggcctataacctgcatagtgcctatggaaactggttccct
ggcagcaagcccctcatacagcaggccatggccaagatcatgaaggcaaaccctgccttg
tatgtgttacgtgaacggatccgtaaagggctgcagctttattcatctgagcccactgag
ccctatctgtcctctcagaactatggtgagctcttttccaaccagattatctggtttgtg
gatgacacgaatgtctacagagtgactatccataagacctttgaagggaacctgaccacc
aagcccatcaatggggccatcttcatcttcaacccacgcacagggcagctgtttctcaag
ataattcacacatctgtgtgggctggacagaagcgtttggggcagttggctaagtggaag
acagctgaggaggtggctgccctgatccgatctctgccagtggaggagcagcccaagcag
atcattgtcaccaggaaaggcatgctcgatccattggaggtgcacttgctggacttcccc
aatattgtgatcaaaggatcagagctccagctccccttccaggcttgtctcaaggtggaa
aagtttggggatctcatccttaaagccactgagccgcagatggttctctttaacctctat
gatgactggctcaagactatctcatcttacacggctttctcccgcctcatcctgattctg
cgtgccctgcatgtgaacaacgaccgggcgaaggtcatcctgaagccagacaagactaca
atcacagaaccacaccacatctggcccactctgactgacgaggagtggatcaaggtggag
gtgcagctcaaggaccttatcttggctgactatggcaagaaaaacaatgtgaatgtggca
tcactgacacaatcagaaattcgagacatcatcctgggtatggagatctctgcaccatca
cagcagcggcagcagatagctgagattgagaagcagaccaaggaacagtcacagctgact
gcaacccagactcgtactgtcaacaagcatggtgacgaaatcatcacctctaccaccagc
aactatgagacccagactttctcatctaagactgaatggagggtcagggccatctctgcc
gccaacctgcacctaaggaccaaccatatctatgtttcatctgatgacatcaaggagact
ggttatacctatattcttcccaagaatgtgcttaagaagtttatctgcatatctgacctt
cgggcccaaattgcagggtacctctatggggtgagcccaccagataacccccaggtgaag
gagatccgctgcatcgtgatggtaccacagtggggcactcaccagactgtgcacctgcct
ggccagctgccccagcatgagtacctcaaggagatggaacccttaggttggatccacact
cagcccaacgagtccccccagctgtcaccccaggatgtcaccacccatgccaagatcatg
gctgacaacccatcttgggatggcgagaagaccattatcatcacctgcagcttcacacca
ggctcctgcaccctgacagcctacaagctgacccccagtggctatgaatggggccgccag
aacacagacaagggcaacaaccccaagggctacctaccctcgcactacgagagggtccag
atgctactgtcagaccgcttccttggcttctttatggtccctgcccagtcctcatggaac
tacaactttatgggtgttcggcatgatcccaacatgaagtatgagctgcagctggcaaac
cccaaagagttctaccacgaggtgcacaggccctcccacttcctcaactttgctctcctg
caggagggtgaggtctactctgcggaccgagaggacctctacgcctag
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integrated database retrieval system
