Lipotes vexillifer (Yangtze River dolphin): 103084730
Help
Entry
103084730 CDS
T03090
Symbol
SMARCE1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03082
ATP-dependent chromatin remodeling
lve04714
Thermogenesis
lve05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103084730 (SMARCE1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103084730 (SMARCE1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103084730 (SMARCE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lve03021
]
103084730 (SMARCE1)
03036 Chromosome and associated proteins [BR:
lve03036
]
103084730 (SMARCE1)
Transcription machinery [BR:
lve03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103084730 (SMARCE1)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103084730 (SMARCE1)
PBAF complex
103084730 (SMARCE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Sarcoglycan_2
Pepsin-I3
Motif
Other DBs
NCBI-GeneID:
103084730
NCBI-ProteinID:
XP_007465265
UniProt:
A0A340Y1D2
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MSKRPSYAPPPTPAPATQMPSTPGFVGYNPYSHLAYNNYRLGGNPGTNSRVTASSGITIP
KPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQEYLNEYE
AEKIEYNESMKAYHNSPAYLAYINAKSRAEAALEEESRQRQSRMEKGEPYMSIQPAEDPD
DYDDGFSMKHTATARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVHQRK
LEAELLQIEERHQEKKRKFLESTDSFNNELKRLCGLKVEVDMEKIAAEIAQAEEQARKRQ
EEREKEAAEQAERSQSSIVPEEEPAANKTEEKKEDESIPMETEETHLEETTESQQNGEEG
TSTPEDKESGQEGVDSLAEEGTSDSNTGSESNSATVEEAPTDPVPEDGKKE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagaccatcttatgccccacctcccaccccagctcctgcaacacaaatgccc
agcacaccagggtttgtgggatacaatccatacagtcatctcgcctacaacaactacagg
ctgggagggaacccgggcaccaacagccgggtcacggcatcctctggtattacgattcca
aaacccccaaagccaccagataagccgctgatgccctacatgcggtacagcagaaaggtc
tgggaccaagtaaaggcttccaaccctgacctaaagttgtgggagattggcaagattatt
ggtggcatgtggcgagatctcactgatgaagaaaaacaagaatatttaaacgaatacgaa
gcagaaaagatagagtacaatgaatctatgaaggcctatcataattcccccgcgtacctt
gcttacataaatgcaaaaagtcgtgcagaagctgctttagaggaagaaagtcgacagaga
cagtctcgcatggagaaaggagaaccttacatgagcattcagcctgctgaagatccagat
gattatgatgatggcttttcaatgaagcatacagctaccgcccgtttccagagaaaccac
cgcctcatcagtgaaatccttagtgagagtgtggtgccagacgttcggtctgttgtcaca
acagctagaatgcaggtcctcaaacgacaggtccagtccttaatggttcatcagcgaaaa
ctagaagctgaacttcttcaaatagaggagcgacaccaagaaaagaagaggaaattcctg
gaaagcacagattcatttaacaatgaacttaaaaggttgtgtggtttgaaagtagaagtg
gatatggaaaaaattgcagctgaaattgcacaggccgaggaacaggctcgcaaaaggcag
gaggaaagggagaaagaggcagcagagcaagctgagcgcagccagagcagtattgttcct
gaggaggagccagcagctaataagaccgaagaaaagaaagaagacgagagcattccgatg
gagacagaggagacacaccttgaagaaacgacggaaagccaacagaatggtgaagaaggc
acgtctactcctgaggacaaggagagcgggcaggagggggtggacagtctggcagaggaa
gggaccagtgatagtaacactggctcagagagcaacagtgcaactgtggaggaagcacca
acagaccccgtaccagaagacgggaaaaaagaataa
DBGET
integrated database retrieval system
