Lipotes vexillifer (Yangtze River dolphin): 103084804
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Entry
103084804 CDS
T03090
Symbol
CNOT3
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103084804 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103084804 (CNOT3)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103084804 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103084804 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
103084804
NCBI-ProteinID:
XP_007463921
UniProt:
A0A340XRG1
LinkDB
All DBs
Position
Unknown
AA seq
735 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHV
RMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEISQSP
AKNGSKPVHSSQHPQSPAVPPSYPSGPPPAASALSTAPGNNGAPAPAAPPSALGAKASPA
PSHSSGTPAPYAQAVAPPAPSGPSPAQPRPPSVQPGGGGGGGKQNGATSYSSVVADSPAE
VALSSGGGSSANSQALGPPSGPHNPPPSTSKEPNATAPTGAGGVAPGSGNNSGGPSLLVP
LPVNPPSSPTPSFSEAKAAGALLNGPPQFSAAPEIKAPEPLSSLKSMAERAAISSGIEDP
VPTLHLTERDIILSSTSAPPASAQPALQLSEVNIPLSLGVCPLGPVPLTKEQLYQQAMEE
AAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLCEAPXSPVPCFLP
QGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKE
GFTFEYRYLEDRDLQ
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaagctccaaggtgagattgatcgctgcctcaagaaggtgtccgag
ggcgtggagcagtttgaagatatttggcagaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgatctaaagaaggagattaagaagcttcaacggctgagggac
cagatcaagacttgggtagcatccaatgagatcaaggacaagaggcagcttatagacaac
cgcaagctcattgagacgcaaatggaacggttcaaagttgtggagcgagagaccaagacc
aaagcctatagcaaggagggcctgggcctggcacagaaggtggaccctgcccagaaggaa
aaggaggaggtcggccagtggctcacgaataccatcgacaccctaaacatgcaggtggac
cagtttgagagtgaagtggagtcactgtcggtgcaaacacgcaagaagaagggcgacaag
gataagcaggaccggatcgagggcctgaagcggcatatcgagaagcaccgctaccacgtg
cgcatgctggagaccatcctgcgcatgctggacaacgactccatcctcgtggacgctatc
cgcaagatcaaggacgatgtcgagtactacgtggactcgtcccaggaccccgacttcgag
gagaacgagttcctctacgacgacctggacctcgaggacattccacaggcgctggtcgcc
acctccccgcccagccacagtcacatggaggatgagatcttcaaccagtcaagcagcacg
cccacttcgaccacctccagctcgcccatcccgcccagcccggccaactgcaccacggaa
aactctgaagatgacaagaagaggggacgctcgacggatagtgaaatcagccagtctcca
gccaaaaacggctccaagcctgtccacagcagccagcaccctcagtccccagctgtgccg
ccaagctacccctccggccccccgcccgccgcctctgccctgagcaccgcccctggcaac
aacggggcccctgccccggcagcgcccccaagcgccctgggcgccaaggccagcccagct
cccagccacagctcgggcacgcctgccccctacgcccaggctgtggccccgccagctccc
agtgggcccagccccgcgcagccccggccccccagcgtgcagcccggcggaggcggaggc
ggaggcaagcagaacggcgccaccagttacagctcagtagtggcagacagcccggcagag
gtggctctcagcagcggcgggggcagcagtgccaacagccaggccctgggccccccgtct
ggcccccacaacccacctcccagcacctcgaaggaacccaatgcgacagccccaacgggg
gctgggggcgtggccccaggctcagggaacaactcggggggacccagtctcctggtgcca
ctacctgtgaaccctcccagctccccgacacccagcttcagcgaggccaaggcagccggc
gccctgctcaatggacctccacagttcagcgctgccccggagatcaaggcccctgagcct
ctgagctctttgaagtccatggcggagcgggcagccatcagctccggcatcgaggacccc
gttcccacgctgcacctgactgagcgagacatcatcctgagcagcacgtcagctcccccg
gcctcagcccagccggccctgcagctgtcagaggtgaacataccgctgtcgctgggtgtg
tgtcccctggggcctgtgcccctcaccaaggagcagctctaccagcaggccatggaagag
gccgcctggcaccacatgccccacccctcagactctgagcgtatccggcagtacctcccc
cggaacccctgcccgacacccccctaccaccatcagatgccgcccccgcactcggacacc
gtggagttctaccagcggctttgcgaggccccctgatcccccgttccatgcttccttcct
cagggcactaaggcacagtacctggcagccaaggccctaaagaagcagtcgtggcgattc
cacaccaagtacatgatgtggttccagaggcacgaggagcccaagaccatcactgacgag
ttcgagcagggcacctacatctactttgactacgagaagtggggccagcggaagaaggaa
ggcttcacctttgagtaccgctacctggaggaccgggacctccagtga
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