Lipotes vexillifer (Yangtze River dolphin): 103084876
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Entry
103084876 CDS
T03090
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1-like isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04517
IgSF CAM signaling
lve04721
Synaptic vesicle cycle
lve04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
103084876 (RIMS1)
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
103084876 (RIMS1)
04721 Synaptic vesicle cycle
103084876 (RIMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lve04131
]
103084876 (RIMS1)
Membrane trafficking [BR:
lve04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
103084876 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
103084876 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
103084876
NCBI-ProteinID:
XP_007456179
UniProt:
A0A340XAI1
LinkDB
All DBs
Position
Unknown
AA seq
1678 aa
AA seq
DB search
MSSAVGPRGPRPPTVPPPMPELPDLSHLTEEERSIIMAVMDRQKEEEAKEEAMLKCVVRD
MVKPAACKTPRNVEHQPHQPSPRLHQQFESYKEQVRKIGEEARRYQGEHKDDAPTCGICH
KTKFADGCGHLCSYCSTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFF
GSGPQQPSQDGTLSDTATGAGSEAPREKKSRLQERSRSQTPLSTATASSQDQFPHSVPPD
RRKGAEPSQQAGRPEQKQASFRSRSEPPRDRKKTPGLTEQNGKGAPKGERKRAPRSSGQP
AEGPTEERERKERRESRRLEKGRSQDYPDVPEKQENGPAVEAEKQRKEEEYQTRYRSDPN
LARYPVKPPPEEQQMRMHARVSRARHERRHSDVALPRTEAAAGPEGRPGPRAPNAARGSP
PASPRAYSAERTAEARXXXXXXXXXXSPPAPRPGPGPADAPEPRAPEPLRKQSRLDPGAA
VLVRKAKREKVETMLRNDSLSSDQSESVRPSPPKPHRAKRGGKRRQMSVSSSEEEGVSTP
EYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVI
LNKRTTMPKESGALLGLKVVGGKMTDVGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNG
KPLPGATNEDVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMER
PSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNPY
VKMYFLPDRSDKSKRRTKTVKKVLEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRVQEE
ESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFMPRRHVHGESASKKLQRS
QRISDSDISDYEVDDAIGVVPPVGYRSSARESKPSTLTVPEQQRTTHHRSRSVSPHRGDD
QGRLRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDVSCSPVGHRPGDVDSQCLSEQDSELL
MLPRAKRGRSAECLHTTRHLVRHNKTLPPKMPLLENCSHWNIYSSILPAHTKTKPLHHEC
FHSRALRFTDEILVSDLQPSLDRARSASTNCLRPDASLHSPERERGRWSPSLDRRRPPSP
RIQIQHASPENDRHSRKSERSSTQKQTRKGTASDAERVLPPCLSRRGYAAPRATDQLVLR
GKHPARSRSSEHPSVRTLCSMHHLAPGGSAPPSPLLTRVHRQASPTRSPPADTAFGSPRG
RQLPQVPGRSGSAEQASLVVEERTRQMKMKVHRFKQTTGSGSSRELDREQYSKYNVHTDQ
YRSCDSVSARSSDSDVSDVSAISRTSSTSFLSEQSERPRGRTSSFTPKMQGRRMGTSGRA
ITKSTSVSGEMYTLEHNDGSQSDTAVGTVGTGGKKRRSSLSAKVVAIVTRRSRSTSQLSQ
TESGHKKLKSTIQRSTETGMAAEMRKMVRQPSRESTDGSINSYSSEGNLIFPGVRLGVDS
QFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMEDKKGQLEVEVIRARSLTQKPGSKSTPA
PYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKC
FMGVAQILLEELDLSSMVIGWYKLFPPSSLVEPTLTPLTRRASQSSLESSTGPPCIRS
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggccgtggggccccgcggtccccgcccgcccaccgtgcctcccccgatgccc
gagctgcccgacctgagccacctgaccgaggaggagaggagcatcatcatggcagtgatg
gaccggcagaaggaagaggaggcgaaggaggaagccatgctcaagtgtgtggtcagggac
atggtgaagcctgctgcctgcaaaaccccaagaaatgtcgaacaccaaccccaccagcct
tcaccgagattgcatcaacaattcgaaagctataaggaacaagtgagaaaaataggggaa
gaagcacggcgttaccagggtgagcacaaagacgatgctccgacctgcgggatctgccac
aagaccaagttcgccgatggctgcggccacctgtgctcctactgcagcaccaagttctgc
gcgcgctgcgggggccgcgtgtccctgcggtccaacaacgaggacaaagtggtgatgtgg
gtatgcaatttgtgtcgaaagcaacaagaaatcttaaccaaatccggggcatggttcttc
ggaagcggccctcaacagccaagtcaggatggaaccctcagcgatacagctacaggcgct
ggttctgaggccccgagagaaaagaaatcccggctgcaggagcgatctaggtctcagacc
cccctgagcacagccacagcctcttcccaggaccagtttccccacagcgtgccgcccgac
aggagaaagggggctgagccctcgcagcaagccgggaggcctgagcagaagcaggcttct
ttcaggtctagaagtgagcctcccagagacaggaagaagaccccagggttgaccgagcag
aatggcaaaggcgccccgaagggcgagcggaaacgcgcgcccaggtcctctgggcagccc
gcggaggggcccacggaagaacgggagcgcaaggaaaggcgggaaagccgaaggctcgag
aaaggccggtcccaggactaccccgacgtgccagagaaacaagagaacggcccggcggtg
gaggccgagaagcagaggaaggaggaggagtaccagacccggtaccgcagcgatccgaac
ctggcgcggtacccggtcaagccgccgcccgaggagcagcagatgcgcatgcacgcgcgg
gtgtcccgcgccaggcacgagcggcgccacagcgacgtggccctgccgcgcaccgaggcg
gcagctgggcccgagggcaggcccggcccgcgcgcacccaacgccgcccggggctcgccg
cccgcctcgccgcgcgcctactcggccgagaggaccgcggaggcccgnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnagcccgccggcgccccggcccggcccgggccccgccgacgcc
ccggagcccagggccccggagccgctccggaagcagagccgcctggaccctggcgcggcc
gtcctcgtgcgcaaggccaagcgcgagaaggtggagaccatgctgcgcaacgactcgctc
agctccgaccagtccgagtccgtgcggccgtctccgcccaagccgcatcgcgccaagagg
ggcggcaagcggcgccagatgtcggtgagcagctcggaggaggagggcgtgtccacgccg
gagtacacgagctgcgaggacgtggagctagagagcgagagcgtcagcgagaagggtgac
ttggattattactggctggatcctgccacgtggcatagccgggaaacatcacctattagc
tcacatcctgtaacgtggcagccatctaaagagggggaccgattaattggacgcgttatt
cttaacaagagaacaaccatgcccaaagaatcaggtgcattactgggtctgaaagttgtt
ggagggaaaatgactgatgtaggacgcctcggtgctttcatcaccaaagtaaagaagggt
agcctcgcagatgtagttggacacttgagagcaggggatgaagttctagaatggaatggt
aaacccctgccgggagctacaaatgaagacgtttacaacattattttagaatcaaaatca
gaacctcaagttgaaattattgtttcaaggcctattggtgacattccacggattcctgag
agctcccatcctccactggagtccagttctagttcctttgaatctcagaagatggaaagg
ccttccatttctgtaatttctccaacaagccctggagctctcaaagatgcgccacaagtc
ttaccaggacaactttctgtgaagctgtggtatgacaaagtgggccaccagctgattgta
aatgttctgcaagcaacagatctacccccaagagtagatgggcgtcccaggaatccctat
gtaaaaatgtattttcttccagatagaagtgataaaagtaaaaggcgaaccaaaacagta
aagaaagtactagaaccaaaatggaaccagacttttgtgtattcacatgtgcatcgtaga
gatttcagagaacggatgttggaaataaccgtgtgggaccagcccagggtgcaagaagaa
gagagtgaattccttggagagatcctcatagagttggagacggcgcttctagatgatgag
ccgcattggtataaacttcagactcatgatgaatcctcactacctctgcctcagccatca
cccttcatgccacggcgacacgtccatggggagagtgccagcaaaaagctgcaaaggtcc
cagcgaatcagtgacagtgacatatcagactatgaggttgatgatgccattggagtggtc
cctccagtaggttataggtctagtgctagagaaagcaaaccttcaacattaactgtgcca
gagcagcagagaacaacgcatcaccgatcacggtcggtatctcctcatcgtggcgatgat
caggggaggctgcgttcccgtttaccaaatgtgccattacagaggagtttagatgaaatt
catccaacaagaaggtcacgttctccaaccagacaccacgatgtgtcctgcagcccagtt
ggtcacagacccggagatgtggacagtcagtgtctatcagaacaagacagtgagcttctc
atgcttcccagagcaaaacgaggacgaagtgcagaatgcctacacaccaccagacatctt
gttaggcacaataaaacgttaccgcccaagatgcccttgttagagaactgttctcactgg
aatatttacagctcaattctgcctgcacatactaaaaccaaaccccttcaccatgaatgc
tttcactcgagagcactgaggtttactgatgagattctggttagtgacctgcagccctcc
cttgacagggcgaggagtgctagtaccaactgcttgagaccagatgctagtttgcattca
ccagaacgagaaaggggtagatggtccccctctctagataggagacggcctcctagcccc
aggattcaaatccagcatgcgtctccggagaatgacaggcactccagaaagtctgaaaga
tctagcacccaaaaacagactaggaaaggcactgcctctgatgcagaaagggttctccca
ccatgtctttctagaaggggatacgcagccccaagagcgactgatcagctagtccttagg
ggaaaacatcccgctcgctcccgctcgagtgagcaccctagtgtcagaacactgtgttct
atgcaccaccttgcccccggagggtcggcgccaccttctccactcctgacaagagttcac
cggcaggccagcccgacgcggtccccgcccgcagacacagcctttggcagccctcggggc
aggcagctcccacaagtgccagggaggagcggcagtgcagaacaagcaagcttagtagtg
gaggagcgaacgagacagatgaaaatgaaagtgcatcgatttaagcagacaacagggtct
ggttctagtcgagaacttgatcgcgaacaatactccaagtataacgtacatacagatcag
taccgaagctgcgacagcgtctctgccagatcctcagacagtgacgtcagtgacgtgtct
gccatctccaggaccagtagcaccagcttcctgtccgagcaatctgagcggcccaggggc
aggaccagttcatttacccctaaaatgcaaggcagacggatggggacttcaggaagagcc
atcaccaagagcacgagcgtgagtggagagatgtacacactggagcataatgatggcagt
cagtcggacacggctgtgggcactgttggaacaggtgggaagaaaaggaggtccagcctg
agtgccaaagtggttgccattgtgactcgaaggagcagaagcacgtcccagctaagccaa
acagagtcaggccacaagaagttgaaaagcaccatccagaggagcacagagacgggaatg
gcagccgagatgagaaagatggtgaggcagccgagccgggagtctacggacggcagcatc
aacagttacagctccgagggaaacttaatatttcctggagtgagactaggagtggatagt
caattcagtgattttcttgatggactgggacccgcccagcttgttggccgccaaaccctc
gccacccctgcaatgggtgatatacaaattggaatggaggataaaaagggccaattagaa
gttgaagtgattagagcacgaagcctcacgcaaaagcctggttccaaatccacacctgct
ccatatgtcaaagtgtatcttttggagaacggggcctgcatagccaaaaagaagacaaga
attgcacgaaagacccttgaccccttgtatcaacagtccctggtttttgacgaaagtcca
cagggtaaagtccttcaggtgattgtctggggagactacggcaggatggatcacaaatgt
tttatgggcgtggcccagatcttgttggaggaactggatctttccagcatggtcatcggc
tggtacaagctattccccccgtcatcactggttgaacccacgctcacccccctgacccgc
cgggcttcccagtcatctctggaaagttccaccgggcccccctgcatccggtcctaa
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integrated database retrieval system
