Lipotes vexillifer (Yangtze River dolphin): 103085029
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Entry
103085029 CDS
T03090
Symbol
NPC1
Name
(RefSeq) Niemann-Pick C1 protein
KO
K12385
Niemann-Pick C1 protein
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
lve04142
Lysosome
lve04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
103085029 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
103085029 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
103085029 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lve02000
]
103085029 (NPC1)
Transporters [BR:
lve02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
103085029 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
103085029
NCBI-ProteinID:
XP_007448682
UniProt:
A0A340WM17
LinkDB
All DBs
Position
Unknown
AA seq
1291 aa
AA seq
DB search
MSACGPVLGLLLLLLCPAQVSGRRRPGQAVGDVVFSQSCVWYGECGIASGDKRYNCRYSG
LPKPLPEDGYDLVLELCPAFFFGNVSLCCDVQQLRTLKDKLQLPLQFLSRCPSCFYNLVN
LFCELTCSPRQSQFLNVTAMEDYVDPVTNQTKTNVKELQYYIGESFANAMYNACRDVEAP
SSNEKALGLLCGKEAEACNATNWIEYMFNKNNGQAPFTITPIFSDLPAHEMEPMNNATKG
CDESVDEVTGPCSCQDCSIVCGPKPQPPAPPVPWRILGLDAMYVIMWSTYMGFLLVFFGA
FFAVWCYRKRYFVSEYTPIDGNIAFSVNASDKGGPSCCDSLGAAFEARLQRLFAQWGLFC
VRHPGCIVFFSVAFITACSSGLVFVQVTTDPVDLWSAPGSQARREKEYFDTHFGPFFRTE
QLIIQAPLTQPHMYHPYPSGAGVPFGPPLAIDILHQVLDLQTAIENITASYNNKTVTLQD
ICLAPLSPYNKNCTIMSVLNYFQNSHSVLDHKVGDDFYVYADYHTHFLYCVRAPASLNDT
SLLHDPCLGTFGGPVFPWLVLGGYDDENYNNATALVITFPVNNYCNDTEKLQRAQAWERE
FINFVKNYKNPNLTVSFKAERSIEDEVNRESQSDIFTVLISYGIMFLYISIALGHIKSCS
RFLVDSKISLGIAGILIVLSSVACSLGIFSYIGIPFTLIVIEVIPFLVLAVGVDNIFILV
QTYQRDERLQGETLDQQVGRVLGEVAPSIFLSSFSETVAFFLGGLSVMPAVHTFSLFAGL
AVLIDFLLQITCFVSLFGLDIKRQEKNRLDVLCCVGGAADRAGIQASESCLFRFFRDAYA
PLLLKDWMRPIVVAVFVGILSFSIAVLNKVEIGLDQSLSMPDDSYMTDYFQSLSRYLHAG
PPVYFVVKGGHDYVSLKGQNMVCGGLGCNNDSLVQQIFTAAQLDNYTRIGFAPSSWIDDY
FDWVKPQSSCCRLYNSTDWFCNASVVDPACVRCRPLTPEGKQRPQGADFMRFLPMFLSDN
PNPKCGKGGHAAYSAAVNILGNGTGIGATYFMTYHTVLKTSADFIDAMEKARLIAGNITR
TMGLEGSDRHVFPYSVFYVFYEQYLTMIHDTIFNLGVSLGAIFLVTVVLLGCELWSAVIM
CITIAMILVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRMERA
EEALSHMGSSVFSGITLTKFGGIMVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVL
LSYIGPSINKAKSLAAQERYRGTEREKLLNF
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgtgcggcccggtcctcggcctccttctgctgctgctctgcccggcgcaggtg
agcggccgccggcgacccggacaggctgtgggggacgtggtattttcacagtcctgtgtt
tggtatggagagtgtggaattgcatctggagataagaggtacaattgccgatattctggg
ctaccaaagccgttgccagaggacggctatgacctggtgctggaactctgtccagcgttc
ttctttggcaacgtcagtctttgctgtgatgttcagcagcttcggacactgaaagacaaa
ctgcagctgcctctgcagtttctgtccagatgtccatcctgtttttataacctagtgaac
ctgttttgtgagctgacatgtagccctcgacaaagtcagtttctgaacgttacagcaatg
gaagattatgttgatcctgttacaaaccagacaaaaacaaacgtaaaagaattacaatac
tatattggagagagttttgccaatgccatgtacaatgcctgcagggacgtggaggccccc
tcgagtaacgagaaagccctggggctgctgtgcgggaaggaggccgaagcctgcaacgcc
accaactggatcgagtacatgttcaacaagaacaacggccaggcgcctttcaccatcacg
cccatcttttcagatcttccagctcatgagatggagcccatgaacaatgccaccaagggc
tgtgatgagtccgtggatgaggtcacggggccctgcagctgccaggactgctccatcgtc
tgtgggcccaagccccagcccccagcccctcctgttccctggagaatcctgggtctggac
gccatgtacgtcatcatgtggagcacctacatgggattcctgctcgtgttttttggtgca
ttctttgctgtgtggtgctacagaaaacggtattttgtctccgagtacacccccattgat
ggcaatattgctttctctgtaaatgccagtgacaaaggggggccgtcctgctgtgactct
ctgggtgccgccttcgaagcccgtctacagcggctctttgcacagtggggcttattctgc
gtccgacaccccggctgcatcgtgttcttctccgtggccttcatcaccgcctgttcttca
ggcctggtgtttgtgcaggtcacgacagacccggtggacctctggtctgcgcccggcagc
caggcgcgccgggagaaggagtactttgacacacacttcggacctttcttccgcaccgag
cagctcatcatccaagcccccctcacccagccgcacatgtaccatccttacccctctgga
gccggcgtgccctttgggcccccacttgccatagacatcttgcaccaggttcttgactta
caaacagccatcgagaacattactgcatcttacaacaacaagactgtgacactccaggac
atctgcttggcccccctctcaccatataacaagaactgcaccatcatgagcgtgttaaat
tacttccagaacagccattccgtgctggaccacaaagtaggagacgacttctatgtgtac
gcggattaccacacacacttcctgtactgcgttcgggctcccgcctccctgaatgacacc
agtttgctccacgatccttgcctggggacctttggtggaccagtgttcccgtggcttgtg
ttaggaggctatgatgatgaaaactacaataacgccacagcccttgtgattacctttcct
gtcaataattactgtaacgatacagagaagctccagagggcccaggcctgggaaagagag
tttattaattttgtgaagaactacaagaatccaaatctgaccgtttcttttaaggctgaa
cgaagtattgaagatgaagtaaaccgtgaaagtcaaagtgatatcttcactgttctaatc
agctatggcatcatgtttttatatatttccatagccttggggcatatcaaaagctgtagc
aggtttctggtggattcgaaaatctccctgggcatcgcgggtatcctgatcgtgctgagc
tcggtggcgtgctccttgggcatcttcagctacattgggatccccttcaccctcattgtg
atagaagtcatcccgttcctggtgctggctgtgggagtggacaacatcttcattctggtc
cagacctaccagagagatgaacgtctccaaggggagacgctggaccagcaggtgggccgg
gtcctgggagaagtggctccaagtattttcctgtcgtccttttcagagacggtagcattt
ttcttaggaggcctgtccgtgatgccggctgtgcacaccttctctctctttgcggggttg
gcagtcctcattgacttcctccttcagattacctgttttgtgagtctctttgggttagac
attaagcggcaagagaagaaccggctggatgtcctctgctgtgtcgggggtgcggcagac
agagcaggcatccaggcctcggagagctgcttatttcgcttcttcagagacgcctatgct
ccacttctgcttaaggactggatgcggcccattgtggtagcggtatttgtgggtattctg
tcattcagtatcgcagtcctgaacaaagtagaaatcggcttggatcagtctctgtcaatg
ccagatgactcctacatgacggattatttccagtccctcagtcgctacctgcacgcgggc
ccgcccgtgtactttgttgtgaagggagggcacgactacgtttctctgaaagggcagaac
atggtgtgcgggggcctgggctgcaataacgactcgctggtgcagcagatcttcaccgcc
gcccagctggacaactatacccggataggctttgctccctcgtcctggattgacgattat
tttgactgggtcaaaccacagtcgtcttgctgtaggctctacaacagcacggattggttc
tgcaatgcatcggtggttgaccctgcctgcgtccgctgccggcctctgactccagagggc
aagcagaggcctcagggcgcagacttcatgaggttcctgcccatgttcctctccgataac
ccgaaccccaagtgtggcaaagggggacacgccgcttacagcgcggcagttaacatcctc
ggcaacggcacgggcattggagccacgtacttcatgacctaccacacggtgctcaagacc
tccgctgacttcatcgacgccatggaaaaggcccgcctcatcgccggcaacatcaccaga
accatgggcctggaaggaagtgatcgccatgtgttcccatacagtgtgttctacgtcttc
tatgaacagtacctgaccatgattcacgacactatctttaacctcggtgtgtccctgggt
gccatctttttggtgaccgtggttctcctgggctgtgagctgtggtcagcagtgatcatg
tgcatcaccatcgctatgatcttggtcaacatgttcggtgtcatgtggctctggggcatc
agtttgaatgcggtttctttggtcaacttggttatgagctgtggcatctccgtggagttc
tgcagccatatcacgagagctttcacagtgagcacgaagggaagccgcatggaacgggca
gaagaggcgctctcccacatgggcagctctgtattcagtggaatcacactaacaaaattt
ggaggcattatggttttggcttttgccaaatctcaaattttccagatattttacttcagg
atgtatttagctatggtcttactgggagccactcatggattaatattcctccctgtcttg
ctcagttacatagggccatcgataaataaagccaaaagtttggccgctcaagagcgatac
agaggtacagagcgagagaagctcctcaatttctag
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integrated database retrieval system
