Lipotes vexillifer (Yangtze River dolphin): 103085068
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Entry
103085068 CDS
T03090
Symbol
PCDHB5
Name
(RefSeq) protocadherin beta-5
KO
K16494
protocadherin beta
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lve04515
]
103085068 (PCDHB5)
Cell adhesion molecules [BR:
lve04515
]
Cadherins
Protocadherins
103085068 (PCDHB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
API5
Motif
Other DBs
NCBI-GeneID:
103085068
NCBI-ProteinID:
XP_007461550
UniProt:
A0A340XR84
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
METAPAKTLQKRQVIFLAILLLLWEAGSEAVRYSMPEETESGSFVATLAKDLGLRVGELA
TRGARIHYKGNKQLLQLDVTTGNLFLYEKLDREVLCGATDPCLLHFQLLLENPVQFFQAD
LQLTDINDHSPEFLEREMLLKIPENVQTGTVFPLKIAQDFDIGSNTIQNYTISPNSHFHV
VTHNRGDGRKYPELVLDKPLDREEGPELSLTLTALDSGAPPRSGTTAVHIEVVDINDNAP
EFLQSVYEVQIPENSPLNSLVVAVSARDLDAGMNGNVAYALFQGDEATQPFVIDEITGEI
RLKRALDFEATRYYNVEIAATDGGGLSGKCTVVIEVVDVNDNVPELTMSTLTSSTPENSP
ETVVAVFSVSDPDSEDNGRMVCSIQNDLPFLLKPTFKNFYTLVTERPLDRESRAEYNVTI
TVTDMGTPRLKTQHNITVLVSDVNDNAPAFTQTSYTLSVRENNSPALHIGSVRATDRDAG
ANAQVTYSLLPPLDPHVPLASLVSINPDNGHLFALRSLDYEALRAFEFRVGAADRGSPAL
SSQALVRVLVADDNDNAPFVLYPLQNASAPCTELVPRAAEAGYLVTKVVAVDGDSGQNAW
LSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLLVLVKDNGEPPLSASVTLHVL
LVDGFSQPYLPAPEAEAADAAPAAPLTVYLVVALASVSSLFVFSVLVFVAVRLCRRGGAA
SVSRCSVPEGHFPGHLVDVSGTGTLSQRYQYEVCLTGGSGLNEFKFLKPILPNLPTQGAG
EEIEENANFRNSAGFS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggagactgcaccagcaaaaacgctacagaaaaggcaagttatctttcttgctatactg
ttgcttttgtgggaggctggctctgaagcagttaggtattccatgccagaagaaactgaa
agtgggtcttttgtggccaccctggcaaaagacctggggctcagggtgggggaactggcc
actcggggtgcgcgaatccattacaaaggaaataaacagctcttgcagctggatgtaacg
accgggaatttgtttctatatgaaaaactagaccgggaggtgctgtgtggggcgacagat
ccctgcctactgcatttccaactgttactggaaaacccggtgcagttttttcaagctgat
ctgcagctcacagatataaatgaccattccccagagttcctcgagagggaaatgctccta
aaaatcccagaaaacgtccagacagggactgtgtttcctttgaaaatagctcaggacttt
gacataggtagcaacactattcagaattacacaatcagccccaactcccattttcatgtt
gtcactcataatcgcggagatggcagaaaatacccagagctggtgctggacaaaccgctg
gatcgggaggaagggcctgaactcagtttaaccctcacggcgctggatagtggggctccg
cccaggtccgggaccactgcagtccacattgaagtcgtggacatcaatgacaacgcccct
gagtttttacagtcggtctatgaggtacagattccggagaacagccccctaaactcctta
gttgtcgctgtctccgcccgagacttagatgcaggaatgaatgggaatgtagcctacgct
ctattccaaggtgatgaagctactcaaccatttgtaatagacgaaataacaggagaaatt
cgtctgaaaagggcattggatttcgaggcaactcgatattataacgtggagattgcagcc
acagatggcgggggcctttcaggaaaatgcactgtagttatagaggtggtggatgtgaac
gacaacgtccccgaactgaccatgtcgacactcaccagctctaccccagaaaactcccca
gagactgtggtggccgttttcagtgtttcagatccagattccgaggacaacggtaggatg
gtttgctccatccagaatgatctcccctttcttttgaaacccacattcaaaaacttttac
accctagtgaccgagaggccactggacagagagagcagagcggaatacaacgtcaccatc
accgtcacagatatggggacaccgagactgaaaacccagcacaacataaccgtgctggtg
tccgacgttaacgacaacgcccccgccttcacccagacctcctacaccctgtccgtccgc
gagaacaacagccccgccctgcacatcggcagcgtccgcgccacagacagagacgcgggc
gccaacgcccaggtcacctactcgctgctgccgcccctcgacccgcacgtgcccctggcc
tccctggtatccatcaacccggacaacggccacctgttcgccctgaggtccctggactac
gaggccctgcgggcgttcgagttccgcgtgggcgccgccgaccgcggctcgcccgcgctc
agcagccaggcgctggtgcgcgtgctcgtggcggacgacaacgacaacgcgcccttcgtg
ctgtacccgctgcagaacgcctcggcgccctgcaccgagctggtgcccagggcggccgag
gcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcctgg
ctgtcgtaccagctgctcaaggccacggagcccggcctcttcggcgtgtgggcgcacaac
ggcgaggtgcgcacggcccggctgctgagcgagcgcgacgcggccaagcacaggctgctg
gtgctggtcaaggacaacggcgagccgccgctctcggccagcgtcacgctgcacgtgctg
ctggtggacggcttctcgcagccctacctgccggccccggaagcggaagcggcggacgcg
gccccggccgccccgctcaccgtctacctggtggtggccttggcgtcggtgtcgtcgctc
ttcgtcttctcggtgctggtgttcgtcgcggtgcggctgtgcaggaggggcggggcggcc
tcggtgagtcgctgctcggtacccgagggccactttccaggccacctggtggacgtcagc
ggcacggggaccctgtcccaacgctatcagtacgaggtgtgtctgacgggaggctccggg
ttaaatgagtttaaattcttgaagcccattctccccaacctcccgacccagggcgctggt
gaagaaatagaggaaaacgccaacttccgtaatagcgctggattcagttag
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