Lipotes vexillifer (Yangtze River dolphin): 103085308
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Entry
103085308 CDS
T03090
Symbol
PSMC2
Name
(RefSeq) LOW QUALITY PROTEIN: 26S protease regulatory subunit 7
KO
K03061
26S proteasome regulatory subunit T1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03050
Proteasome
lve05010
Alzheimer disease
lve05012
Parkinson disease
lve05014
Amyotrophic lateral sclerosis
lve05016
Huntington disease
lve05017
Spinocerebellar ataxia
lve05020
Prion disease
lve05022
Pathways of neurodegeneration - multiple diseases
lve05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
103085308 (PSMC2)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
103085308 (PSMC2)
09164 Neurodegenerative disease
05010 Alzheimer disease
103085308 (PSMC2)
05012 Parkinson disease
103085308 (PSMC2)
05014 Amyotrophic lateral sclerosis
103085308 (PSMC2)
05016 Huntington disease
103085308 (PSMC2)
05017 Spinocerebellar ataxia
103085308 (PSMC2)
05020 Prion disease
103085308 (PSMC2)
05022 Pathways of neurodegeneration - multiple diseases
103085308 (PSMC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lve03051
]
103085308 (PSMC2)
Proteasome [BR:
lve03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
103085308 (PSMC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
OB_PRS7
AAA_lid_3
AAA_22
AAA_2
AAA_5
AAA_16
DUF815
nSTAND3
AAA_28
AAA_14
RuvB_N
AAA_7
Prot_ATP_ID_OB_C
AAA_33
TIP49
AAA_18
Mg_chelatase
RNA_helicase
Sigma54_activ_2
IstB_IS21
AAA_24
Motif
Other DBs
NCBI-GeneID:
103085308
NCBI-ProteinID:
XP_007467114
UniProt:
A0A340Y5W2
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MAPEPAPARGAGFTSGEEGKGGAPPEARKVLCNHRQAEVLGSPKMPDYLGADQRKTKEDE
KDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPA
LWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEE
GMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLL
HPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARM
VRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIK
VLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARL
CPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggagccagccccggcccgcggagccggctttacttccggtgaggaagggaaa
ggcggggcgccaccggaagcgaggaaggtgctgtgtaatcaccgacaagctgaagtcctt
ggatctcctaaaatgccggattacctcggtgcagatcagcggaaaaccaaagaagatgag
aaagacgacaagcccatccgagctctggatgaaggggatattgccttgctgaaaacttat
ggtcagagcacttactctaggcaaatcaaacaggttgaagatgacattcaacaacttctc
aagaaaattaatgagctcacgggtattaaagagtctgacactggcctggccccaccagca
ctctgggatttggctgctgataagcaaacactccagagtgaacagcctttgcaggtcgcg
aggtgcacaaagataatcaatgctgattcggaggacccgaagtacattatcaatgtgaag
cagtttgccaagtttgtggtggacctcagtgatcaggttgcacctactgacattgaagaa
gggatgagagttggtgtggacagaaataagtatcagattcacattccactgcctcctaag
attgacccaacagttaccatgatgcaggtggaggaaaaacctgatgttacgtatagtgat
gtgggtggctgtaaggaacagattgagaaacttcgagaagtagttgaaaccccactactt
catccagagaggtttgttaaccttggcattgagcctcctaaaggtgtgctgctctttggt
ccaccgggtacaggcaagacactctgtgctcgggcagttgctaataggaccgatgcttgc
ttcattcgagttattggatctgaacttgtacagaagtacgtcggtgagggggctcgaatg
gttagagagctctttgaaatggccagaacaaagaaagcctgccttatcttctttgatgaa
attgatgctattggaggggctcgttttgatgatggtgctgggggtgacaatgaagtgcag
aggaccatgttggaactgatcaatcagctggatgggtttgatcctcgaggcaacattaaa
gttctgatggccacaaacagacctgacactctggaccccgcgctgatgaggcccgggaga
ctggacaggaagattgagtttagcttacctgatctagagggtcggactcacatttttaag
attcatgcccgttcaatgagtgttgaaagagatatcagatttgaattgttagcacgactg
tgtccaaatagcactggtgctgagatcagaagcgtctgcacagaagctggtatgtttgcc
atccgagcacggcgaaaaattgctactgagaaggatttcttggaagctgtaaataaggtc
atcaagtcctatgccaaattcagtgctactccgcgctatatgacatacaactga
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