Lipotes vexillifer (Yangtze River dolphin): 103085355
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Entry
103085355 CDS
T03090
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103085355 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lve03021
]
103085355 (SF3B3)
03041 Spliceosome [BR:
lve03041
]
103085355 (SF3B3)
03036 Chromosome and associated proteins [BR:
lve03036
]
103085355 (SF3B3)
Transcription machinery [BR:
lve03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103085355 (SF3B3)
Spliceosome [BR:
lve03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
103085355 (SF3B3)
Complex B
103085355 (SF3B3)
Complex C
U2 SnRNP specific factors
103085355 (SF3B3)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
103085355 (SF3B3)
TFTC complex
103085355 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
103085355
NCBI-ProteinID:
XP_007463023
UniProt:
A0A340XNM7
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaacttgaccttgcagcgagccactggcatcagctttgccattcatggc
aacttctctggaaccaaacaacaggaaattgttgtttcccggggaaagatcttggagctg
cttcgccctgaccccaacactggcaaagtacacactctactaactgtggaagtatttggt
gtcatccggtcactcatggcctttaggttgacaggtggcacaaaagactacattgtggtt
ggcagtgactcaggtcggattgttatcctggaataccagccatctaagaatatgtttgag
aaaattcaccaagaaacctttggcaagagtggatgccgccgcattgttcctggccagttc
ttagctgtggatcccaaagggcgagctgttatgattagcgccattgagaaacagaaattg
gtgtatatcttgaacagagatgctgcagcccggcttaccatttcatctccactggaggcc
cacaaagcgaacactttagtgtatcatgtggtcggagtagatgtgggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaactggggaagca
gcggctaatacccagcagacacttactttctatgagttagaccttggtttaaatcatgtg
gtccgaaaatacagtgaacctttggaggaacatggaaacttccttataacagttccaggg
gggtcagatggtccaagtggagtgctaatttgctctgaaaactacatcacctataagaac
tttggtgaccaaccagatatccgctgtccaattcccaggagacggaatgacctggatgat
cctgaaagaggaatgatttttgtctgctctgccacccataagaccaagtcaatgttcttc
tttttggcccaaactgagcagggagatatctttaagatcactttggagacagatgaagat
atggttactgagatccggctcaagtattttgatactgtgcctgttgctgctgccatgtgt
gtgcttaaaacaggcttccttttcgtagcatcagaatttggaaaccattacttatatcaa
attgcacatcttggagatgatgatgaagaacctgagttttcatctgccatgcctctggaa
gaaggagatacattcttttttcagccaagaccactcaaaaaccttgtgctggttgatgag
ttggacagcctctctcccattttgttttgccagatagctgacctggccaatgaagacact
ccacagctatatgtggcctgtggtaggggaccgaggtcatctctgagagtcttaaggcat
ggacttgaggtatcagaaatggctgtctcagagctacccggtaaccccaatgctgtctgg
acagtgcgtcggcacattgaagatgagtttgatgcttacatcattgtgtctttcgtgaat
gccacacttgtgttgtccattggagagactgtagaagaagtgactgactctgggtttctg
ggcactaccccaaccttgtcctgctccttgttaggagatgatgccttagtgcaggtgtat
cctgatggcattcggcacatacgagcagacaagagagtcaatgagtggaagactcctgga
aagaaaacaattgtgaaatgtgcagtgaaccaacgacaagtggtgatcgccctgacagga
ggagaactggtctattttgaaatggatccctcaggacagctgaatgaatacacagagcgg
aaggagatgtcagcagatgtggtgtgcatgagtctggccaatgtgccccctggagagcag
cggtctcgcttcctggctgtgggtctggtggacaatactgtcagaatcatctccctggat
ccctcagactgtttgcaacctttgagcatgcaggctctcccagcccagcctgagtccttg
tgtattgtggaaatgggtgggactgagaagcaggatgagctgggtgagaggggctctatt
ggcttcttatacctgaatattgggctacagaatggtgtgttgctgagaactgtcctggac
cctgtaactggggatctgtctgacacccgcactaggtacctggggtcccgtcctgtgaaa
ctctttcgtgtccggatgcaaggccaggaggcagtgttggccatgtcaagccgctcatgg
ttgagctattcttaccaatctcgtttccatctcacccccctgtcttacgagaccctggaa
tttgcatctggcttcgcctctgaacagtgccctgagggcatcgtggccatctccaccaat
accctgaggattttggcattggagaagctgggtgctgtcttcaatcaagtagcctttcca
ctgcagtacacacccaggaaatttgtcattcaccctgaaagtaacaaccttatcatcatt
gagactgaccacaatgcctacactgaggccacaaaagctcagaggaagcagcagatggca
gaggaaatggtagaagcagcaggagaggatgagcgagagctggctgcggagatggcagct
gcattcctcaatgaaaaccttcctgagtccatttttggagctcctaaggctggcaatgga
cagtgggcctctgtgatccgagtgatgaatcctattcaggggaacacactggaccttgtc
cagctagaacagaatgaagctgcttttagtgtggctgtgtgcaggttctccaacactggc
gatgattggtatgtgctggtgggcgtggccaaagacctgatactgaacccccgatctgta
gcggggggctttgtctatacctacaagctcgtgaacaatggggaaaaactggagtttttg
cacaagactccagtggaagaggtccctgctgccattgccccattccaggggagggtgttg
attggtgtggggaagcttctgcgagtctatgacctgggaaagaagaagttactccgaaag
tgtgagaacaagcatatcgccaattacatctctgggatccagacaattggacatagggta
attgtatctgatgtccaggaaagtttcatctgggttcgctacaagcgtaatgagaaccag
cttatcatctttgctgatgatacctacccccgatgggtcacaacagctagcctcctggac
tacgatactgtggctggggcagacaagtttggcaacatttgtgtcgtgaggctcccacct
aacaccaatgatgaagtggatgaggatcccacaggaaacaaagccctgtgggaccggggt
ttgctcaacggggcctctcagaaggcagaagtgatcatgaactatcacgtgggcgagaca
gtactttcgttacagaagaccacgctgatccctggaggctcagaatcgcttgtctatacc
accttgtcaggaggaattggcatccttgtcccgttcacatcccatgaggaccatgacttc
ttccagcatgtggaaatgcacctccggtccgagcatccccctctctgtgggcgagaccac
ctcagttttcgttcctattacttccctgttaagaatgtgattgatggagatctctgtgag
cagttcaactccatggagcccaacaaacaaaagaatgtctctgaagaactggaccgaacc
ccacctgaggtgtccaagaagcttgaggacatccggactcgctacgccttctga
DBGET
integrated database retrieval system
