Lipotes vexillifer (Yangtze River dolphin): 103085379
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Entry
103085379 CDS
T03090
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03082
ATP-dependent chromatin remodeling
lve04714
Thermogenesis
lve05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103085379 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103085379 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103085379 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lve03021
]
103085379 (SMARCC2)
03036 Chromosome and associated proteins [BR:
lve03036
]
103085379 (SMARCC2)
Transcription machinery [BR:
lve03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103085379 (SMARCC2)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103085379 (SMARCC2)
PBAF complex
103085379 (SMARCC2)
GBAF(ncBAF) complex
103085379 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_2
Chromo
Motif
Other DBs
NCBI-GeneID:
103085379
NCBI-ProteinID:
XP_007467795
UniProt:
A0A340Y8K4
LinkDB
All DBs
Position
Unknown
AA seq
1019 aa
AA seq
DB search
MNPSRMDRNVEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIVKRHQGTVTEDK
NNASHVVYPVPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTP
EKPRKVHAKWILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDK
KGGNYKKRKRSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPN
VEEVTLPKTVNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPD
LHEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMID
TYRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHF
HVLADTPSGLVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLN
FPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDW
NKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFL
ASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGI
AGTTSEEPERIEESGTDEARAEGQATEEKKEPKEPREGVGALEEEAKEKTSEAPKKDDEK
GKDGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLST
AAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREAL
EYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQPPPQALPPGSQPVPPAGAAGP
PAVHGLALAPASMAPASAGSGAPPGSLGPSEQIGQAGSTAVPQQQQAAGAPQPGAVPPGV
PPPGPHGPSPFPNQQTPPSVMPGAVPGSGHPGVADPGTPLPPDPTAPSPGTVTPVPPTQ
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatcacgcatggaccgcaacgtggaaatgttcatgaccattgagaaatccttg
gtgcagaataattgcctgtctcgacctaacatttttctgtgcccagaaattgaacccaaa
ctgctagggaaattaaaagacattgtcaagagacaccagggaacggtcactgaggataag
aacaatgcctcccatgttgtgtatcctgtcccagggaacctggaggaagaggaatgggta
cggccagtcatgaagagggataagcaggttcttctgcactggggctactatcctgacagt
tacgacacgtggatcccagccagtgaaattgaagcatctgtggaagatgctccaactcct
gagaaacctaggaaggttcatgcaaagtggatcctggacacagacaccttcaatgaatgg
atgaatgaggaagactatgaagtaaatgatgacaaaaaccctgtctcccgccgaaagaag
atttcagccaagacactgacggatgaggtgaacagcccagattcggatcgacgggacaag
aagggggggaactataagaagaggaagcgctccccatccccttcaccgaccccagaagct
aagaagaagaatgctaagaaaggtccctcaacaccttacaccaagtcaaagcgtggccac
agagaagaggagcaagaagacctgacaaaggacatggatgagccctcaccggtccccaat
gtggaagaggtgacattgcccaagacagtcaatactaagaaggactcggagtcggcccca
gtcaaaggaggcaccatgactgacctggatgaacaagaggatgaaagcatggagaccacg
ggcaaggatgaggatgagaacagcacggggaacaagggggagcagaccaagaatccggac
ctgcatgaggacaacgtgaccgaacagacccatcacatcatcatcccaagctatgctgcc
tggtttgactataatagtgttcatgccatagagcggagggctctccctgagttcttcaac
ggcaagaacaagtccaagactccagaaatctacctggcctatcgaaacttcatgatcgac
acttaccggctgaacccccaagagtatctcacgtccactgcctgccgcaggaacctggcg
ggtgatgtctgtgccatcatgagagtccatgccttcctagaacagtggggtcttattaac
taccaggtggatgctgagagtcgaccaacaccaatggggcctccgcccacctcgcacttc
cacgtcttggctgacacaccgtctgggctggtgcctctgcagcccaagaccccgcagggc
cgccaggttgatgctgataccaaggctgggcgaaagggcaaagagctggatgacttggtg
ccagagacggctaagggcaagccagagctgcagacctctgcttcccagcaaatgctcaac
ttccctgataaaggcaaggagaaaccgacagacatgcagaactttgggctgcgcacggac
atgtacacaaagaagaacgtcccctccaagagcaaagctgcggccagtgccactcgagag
tggacagaacaggagaccctgctactcctggaggcactggaaatgtacaaagatgactgg
aacaaagtatcagagcacgtgggaagccgcacacaggacgaatgcatcttgcattttctt
cggcttcccattgaagacccgtacctggaggactcagaggcctccctgggccccctggcc
taccagcccatccccttcagccagtcaggcaaccctgtgatgagcaccgttgccttcctg
gcctctgtcgtcgaccctcgagtggcctctgctgctgcgaagtcagccctagaagagttc
tccaaaatgaaggaagaggtacccacagccttggtggaggcccacgttcggaaagtggaa
gaagcagccaaagtgacaggcaaagcagacccggcctttggtctggaaagcagtggcatt
gcaggaaccacctctgaagagcctgagcggattgaggagagcgggactgacgaggcgcgg
gcggagggccaggccacagaggagaagaaggagcccaaggaaccacgagaaggagttggg
gctctagaggaagaagcaaaggagaagaccagcgaggcgcccaagaaggatgacgagaaa
gggaaagacggcgacagcgagaaggagtcagaaaagagtgacggggacccgatagttgat
cctgagaaggagaaggagcccaaggaagggcaggaggaagtgctgaaggaagtggtggag
tcggagggggaaaggaagacgaaggtggagcgtgacatcggcgagggcaacctctccacc
gctgcggccgctgccctggctgccgctgccgtgaaggccaagcacttggctgctgttgag
gagaggaagatcaaatctctggtggccctgctggtggagacccagatgaaaaagttggaa
atcaaactccggcactttgaggagctagagacgatcatggaccgggagcgagaagcactg
gagtatcagaggcagcagctcctggctgacagacaagccttccacatggagcagctgaag
tacgcggagatgagggcccggcagcagcacttccagcaaatgcaccaacagcagcagccg
cccccgcaagccctgcccccgggctcccagcctgtcccacctgcgggcgctgctgggcca
cctgctgtccacggcttggctctggctccagcctccatggcccctgcctctgcgggcagt
ggggcccctcccggaagcttgggcccctctgaacagattgggcaggccgggtcaactgca
gtgccacagcagcaacaagcagctggagccccccagcctggggcagtcccaccaggggta
cccccccctggaccccacggcccctcaccgttccccaaccaacaaactcctccctcagtg
atgccaggggcagtgccaggcagcgggcacccaggcgtggcggacccaggcacccccctg
cctccagaccccacggccccgagtccaggcacagtcacccctgtgccgcccacacagtga
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integrated database retrieval system
