Lipotes vexillifer (Yangtze River dolphin): 103085610
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Entry
103085610 CDS
T03090
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103085610 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lve04121
]
103085610 (MID1)
Enzymes [BR:
lve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103085610 (MID1)
Ubiquitin system [BR:
lve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103085610 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
TRIM_CC
zf-C3HC4_3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
103085610
NCBI-ProteinID:
XP_007455128
UniProt:
A0A340X0H6
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNESVESITAFQCPTCR
HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERPFDANSMTSAEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQEAKLMEECDLLIEIIQQRRQVIGTKIKEGKVMRLRKLAQQIA
NCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCHNTWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSIAFYDALNSIHLYTFDITFSQPVCPTFTVWNKCLTIITGLPIPDHL
DCTEQLP
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgccctatttgtctggagctctttgaggaccct
cttctgctcccctgcgcacacagcctctgcttcaactgcgcccaccgcatcctggtgtca
cactgcgccaccaacgagtccgtggagtccatcactgccttccagtgccccacctgccga
catgtcatcacgctcagccagcgaggtctagacgggctcaagcgcaacgtcaccctgcag
aacatcatcgacaggttccagaaagcttcggtgagcgggcccaattcccccagcgagacc
cgccgggagcggccgttcgacgccaacagcatgacttcggccgagaaagtcctctgccag
ttctgtgaccaggatcctgcccaagacgccgtgaagacctgtgtcacttgtgaagtgtcc
tactgtgacgagtgcctgaaagccactcacccgaacaagaagccctttacaggccaccgt
ctgattgagcccatcccggactcgcacattcgggggctgatgtgcctggagcacgaggat
gagaaggtgaatatgtactgcgtgaccgatgaccagttaatctgtgccttgtgtaaactg
gtcgggcggcaccgagatcatcaggtggcagctttgagtgagcgctatgacaaattgaag
caaaacttagagagtaacctcaccaaccttattaagaggaacacggaactggagacgctc
ttggctaaactcatccagacatgtcaacatgtggaggtcaatgcatcacgtcaagaagcc
aaattgatggaggagtgtgatcttcttattgagatcattcagcaaagacgacaagttatt
ggaaccaagatcaaagaagggaaggtgatgaggcttcgcaaactggctcagcagattgca
aactgcaagcagtgcattgagcggtcggcatcactcatctcccaagcggaacactctctg
aaggagaatgatcacgcgcgtttcctacagaccgcgaaaaatatcactgagagagtctcc
atggcaacggcatcatcccaggtgctaattcctgaaatcaacctcaacgatacatttgac
acctttgccttagatttttcccgagagaagaaattgctagaatgtctggattaccttaca
gctcccaaccctcccacaattagagaagagctctgcacggcttcctatgacaccatcacc
gttcactggacctccgatgacgaattcagtgtggtttcctacgagctccagtacaccata
ttcaccggacaagccaatgttgtgagtctgtgtaactcggccgatagctggatgatcgtg
cccaacatcaagcagaaccactacaccgtccacggtctgcagagcggcaccaagtacatc
ttcattgtcaaggccatcaaccaggcgggcagccgcagcagtgagcctgggaagttgaag
acaaacagccaaccatttaaactggaccccaaatctgcacatcgcaagctaaaggtgtcc
cacgataacttgacagtagaacgtgatgagtcatcatccaaaaagagccacacgcctgaa
cgcttcaccagccaaggcagctatggcgtagctggaaacgtgttcattgacagtggccgg
cactactgggaagtggtcataagtggaagcacatggtatgccattggcctcgcttacaaa
tcagccccgaagcatgagtggattggcaagaactctgcttcatgggcgctgtgccgctgc
cacaatacctgggtggtgagacacaacagcaaggagatccccatcgagccagccccccac
ctccggcgcgtcggcatcctgctggattacgataacggctccatcgcgttctacgatgcc
ttgaactccatccacctctacactttcgacatcacattctcgcagcctgtgtgccccacc
ttcactgtgtggaacaaatgtctgaccatcataaccggccttcccatcccggaccatcta
gactgcaccgagcagctgccgtga
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