Lipotes vexillifer (Yangtze River dolphin): 103085625
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Entry
103085625 CDS
T03090
Name
(RefSeq) protocadherin beta-17-like
KO
K16494
protocadherin beta
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lve04515
]
103085625
Cell adhesion molecules [BR:
lve04515
]
Cadherins
Protocadherins
103085625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_FAT4_N
Cadherin_4
API5
Motif
Other DBs
NCBI-GeneID:
103085625
NCBI-ProteinID:
XP_007461552
UniProt:
A0A340XN19
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
METPLPKATQKRQVTAIIILLLLWEVGGEVIKYSVLEERHSGSFVANLAKDLGLGLGELA
SRGARILSKGNKQHLQVEHKSGNLLLKEKLDREELCGDMDPCILHFQVLLKNPVQFIQGE
LQLQDVNDHAPEFLENEILLKISESSHTGTAFPLKIAQDLDVGSNTVQNYTISTNFHFQL
FTRNRSDGRKYPELVLAKELDREEQPELRLTLMALDGGSPPKTGTSQVLIMVLDINDNAP
EFARQLYEVQVPENSPRGSLVITVSARDLDAGTHGELSYSFFQSSNQVIQAFEINTVTGD
IRLKKMLDFEEIRSYRMEIEASDGGGLSGKCTVAIEVTDVNDNAPELTMSLLMNDIPENT
PDTVVAIFGISDPDAGDNGKMMCYIQDHLPFLLKISAENFYTLVTEGALDRESRAKYNIT
ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLSVRENNSPALHIGSVRATDRDA
GANAQVTYSLLPPLDPHVPLASLVSINPDNGHLFALRSLDYEALRAFEFRVGAADRGSPA
LSSQALVRVLVADDNDNAPFVLYPLQNASAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLLVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPAPEAEAADAAPAAPLTVYLVVALASVSSLFVFSVLVFVAVWLCRRGGA
ASVGRCSVPEGPFPDHLVGVSGTGTLSQSYQYEVCLTGGSGTREFKCLKPLVPNIMGEGV
GTDTEENSNFRNHLGFN
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagacgccgctacccaaagcgacgcaaaaaaggcaagtgactgccattattattcta
ttactattgtgggaggtgggtggtgaggtcattaagtattccgttctagaagagagacac
agcggctcatttgtggccaacctagcaaaagatctggggttgggcttaggagagctggct
tcgcgcggcgcccggattctttccaaagggaataaacagcatttgcaggtcgagcacaag
agtgggaatttgctcctaaaagaaaaactggaccgggaagagttgtgcggtgacatggat
ccatgtatactgcatttccaggtgttactgaaaaacccggtgcagtttattcaaggtgaa
ttacagctccaagacgtaaatgaccatgcccctgagttcctggaaaatgaaatcctactg
aaaatctcagaaagtagccatacagggactgcatttcctttgaaaatagctcaagattta
gatgtgggcagtaacacagttcagaactacacaattagcaccaacttccatttccaactt
ttcactcgaaatcgcagcgacggcaggaaatacccggagctggtgctggccaaagagctg
gaccgtgaggagcagccagagctcaggttaactctcatggcgctggatggtgggtcacct
ccaaagactgggacttcccaggttctcatcatggtcctggacataaatgacaacgcccct
gaatttgctcggcagctctacgaggtgcaggtcccagagaacagccctagaggctccctt
gtcatcactgtctctgccagagatttggatgctgggacccacggagagctctcctactca
tttttccaatcatcaaatcaagtcattcaggcctttgaaatcaacacagtaacgggggat
attcgattaaaaaaaatgttggattttgaggaaattcgatcttaccgtatggaaattgag
gcctcagacggcgggggtctttcaggaaaatgcactgtagccatagaagtgacggatgta
aacgacaacgcccctgaattgaccatgtcattgctcatgaatgatatcccagaaaacacc
cctgacactgtggtcgctattttcggaatttcagatccagacgccggggacaatggcaaa
atgatgtgttacatccaagaccatctcccattccttctgaaaatttctgcagaaaatttc
tacaccttggtaacagaaggagcgctggacagagagagcagagccaagtacaacatcacc
atcaccgtcacagatatgggaacccccaggctgaaaaccgagcacaacataaccgtgctg
gtgtccgacgtcaacgacaacgcccccgccttcacccagacctcctacaccctgtccgtc
cgcgagaacaacagccccgccctgcacatcggcagcgtccgcgccacagacagagacgcg
ggcgccaacgcccaggtcacctactcgctgctgccgcccctcgacccgcacgtgcccctg
gcctccctggtatccatcaacccggacaacggccacctgttcgccctgaggtccctggac
tacgaggccctgcgggcgttcgagttccgcgtgggcgccgccgaccgcggctcgcccgcg
ctcagcagccaggcgctggtgcgcgtgctcgtggcggacgacaacgacaacgcgcccttc
gtgctgtacccgctgcagaacgcctcggcgccctgcaccgagctggtgcccagggcggcc
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccggcctcttcggcgtgtgggcgcac
aacggcgaggtgcgcacggcccggctgctgagcgagcgcgacgcggccaagcacaggctg
ctggtgctggtcaaggacaacggcgagccaccgctctcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccggccccggaagcggaagcggcggac
gcggccccggccgccccgctcaccgtctacctggtggtggccttggcgtccgtgtcgtcg
ctctttgtcttctcggtgctggtgttcgtcgcggtgtggctgtgcaggaggggcggggcg
gcctcggtgggtcgctgctcggtgcctgaggggccctttccggaccacctagtcggcgtc
agcggcacggggaccctgtcccagagctaccagtatgaggtgtgtctgacgggaggctcc
gggaccagggagttcaagtgtctgaaacctcttgtccccaacatcatgggtgaaggggtt
ggtacggacaccgaggaaaactcgaactttagaaaccacttggggttcaattaa
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