Lipotes vexillifer (Yangtze River dolphin): 103086104
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Entry
103086104 CDS
T03090
Symbol
POLD1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03030
DNA replication
lve03410
Base excision repair
lve03420
Nucleotide excision repair
lve03430
Mismatch repair
lve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103086104 (POLD1)
03410 Base excision repair
103086104 (POLD1)
03420 Nucleotide excision repair
103086104 (POLD1)
03430 Mismatch repair
103086104 (POLD1)
03440 Homologous recombination
103086104 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lve03032
]
103086104 (POLD1)
03400 DNA repair and recombination proteins [BR:
lve03400
]
103086104 (POLD1)
Enzymes [BR:
lve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103086104 (POLD1)
DNA replication proteins [BR:
lve03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
103086104 (POLD1)
DNA repair and recombination proteins [BR:
lve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
103086104 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
103086104 (POLD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-GeneID:
103086104
NCBI-ProteinID:
XP_007463489
UniProt:
A0A340XVW6
LinkDB
All DBs
Position
Unknown
AA seq
1107 aa
AA seq
DB search
MDGKRRPGPGPGVPPKRARGGLWDEDEAYRPSQFEEELALMEEMEAEHRLQEQEEEELQS
ALEGAADGQLSPTAIDARWLRPSPPPLDPQTEPLIFQQLEIDHYVGLARPLPGVPLPSRD
SVPVIRAFGVTDEGVSVCCHIHGFAPYFYTPAPPGFGPEHLSDLQRELNTAVSRDQRGGK
ELTGLAVLAMELCSRQSMFGYQGHGPSPFLRITLALPRLVAPARRILEQGIRVAGLGTPS
FAPYEANVDFEIRFMVDADIVGCNWLELPAGKYVLRPEGKATLCQLEADVLWSDVVSHPP
EGQWQRIAPLRVLSFDIECAGRKGIFPEPEQDPVIQICSLGLRWGEPEPFLRLALTLRPC
APILGAKVQSYEREEDLLQAWSAFVRIMDPDVITGYNIQNFDLPYLISRAQILKVQAFPF
LGRVSGLRSSIRDSSFQSRQTGRRDSKVVSMVGRVQMDMLQVLLREYKLRSYTLNAVSFH
FLGEQKEDVQHSIITDLQNGNDQTRRRLAVYCLKDAFLPLRLLERLMVLVNAMEMARVTG
VPLSYLLSRGQQVKVVSQLLRQAMRQGLLMPVVKTEGGEDYTGATVIEPLKGYYDVPIAT
LDFSSLYPSIMMAHNLCYTTLLRPGAAQKLGLTEDQFIKTPTGDEFVKTAVRKGLLPQIL
ENLLSARKRAKAELARETDPLRRQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISQSV
TGFGRQMIERTKQLVESKYTVENSYSANAKVVYGDTDSVMCRFGVSSVAEAMALGREAAD
WVSGHFPSPIRLEFEKVYFPYLLISKKRYAGLLFSSRCDTHDRMDCKGLEAVRRDNCPLV
ANLVTASLRRLLIDRDPAGAVAHAQDVISDLLCNRIDISQLVITKELTRAAADYAGKQAH
VELAERMRKRDPGSAPSLGDRVPYVIISAAKGVAAYMKSEDPLFVLEHSLPIDTQYYLEQ
QLAKPLLRIFEPILGEGRAEAVLLRGDHTRCKTVLTGKVGGLLAFAKRQNCCIGCRTVLS
HQGAVCKFCEARGSELYQKEVSHLNALEERFSRLWTQCQRCQGSLHEDVICTSRDCPIFY
MRKKVRKDLQDQEQLLRRFGPPGPEAW
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggatggtaagcggcgaccaggcccagggcctggggtgcccccaaagcgggcccgtggg
ggcctctgggatgaggatgaggcatatcggccatcgcagttcgaggaagagctggcgctg
atggaggagatggaggcagagcacaggctgcaggaacaggaggaggaggagctgcagtcg
gccctggagggggctgcggatgggcagctctccccgacggccatagatgcccggtggctt
cggccctccccaccccccctggacccccagacggagcccctcatcttccagcagttggaa
atcgaccattacgtgggcctagcacggcccctgcctggggtgcccctgccgtcccgggac
tccgtgccggtgatccgcgccttcggggtcaccgacgagggcgtctctgtctgctgccac
atccacggctttgcaccctacttctataccccggcgccccccggctttgggcctgagcac
ctgagcgacctgcagcgggagctgaacacggccgtcagccgggaccagcgcgggggcaag
gaactcacggggctggccgtgctggccatggagctgtgctcccggcagagcatgtttggg
taccaggggcacggcccctccccgtttctgcgcatcactctggcgctgccccgcctcgtg
gctcccgcccgccgcatcctggagcagggcatccgcgttgccggcctgggcacccccagc
ttcgcgccctatgaggccaacgttgactttgagatccggttcatggtggacgcggacatc
gttggctgcaactggctggaactcccggctgggaaatacgtcctgaggccggaggggaag
gccacactgtgtcagctggaggcagacgtgctgtggtcggatgtggtcagtcacccgcca
gaagggcagtggcagcgaatcgcacctctgcgggtgctcagttttgatatcgagtgcgct
ggccgcaaaggcatctttccggagcctgagcaggaccctgtgatccagatctgctccctg
ggcctgcgctggggcgagccagagcccttcctgcgcctggcactcaccctacggccctgc
gcccccatcctgggcgccaaggtgcagagctacgagcgggaggaggacctgctccaggcc
tggtccgccttcgtccgcatcatggatcccgacgtgatcactggctacaacatccagaac
ttcgaccttccgtaccttatctcccgggcccagatcctcaaggtgcaggccttccccttc
ctgggccgcgtgtccggcctccgctccagcatccgggattcgtccttccagtccaggcag
accggccggcgggacagcaaggtggtcagcatggtgggccgcgtgcagatggacatgctg
caggtgctgctgcgggagtacaagctccggtcctacacgctcaacgccgtgagcttccac
ttcctgggcgagcagaaggaggacgtgcagcacagcatcatcactgacctgcagaatggg
aacgaccagacgcgccgccgcctggccgtgtactgcctcaaggacgccttcctgcccctg
cggctgctggagcgcctcatggtgctggtgaatgccatggagatggcgcgcgtcaccggc
gtgcccctcagctacctgctcagccgcggccagcaggtcaaggtcgtgtcccagctgctg
cggcaggccatgcgccaggggctgctgatgcccgtggtgaagacggagggcggcgaggac
tacacgggggccacggtcatcgagcccctgaaagggtactatgatgtcccaatcgccacc
ctggacttctcctcgctgtacccgtccatcatgatggcccacaacctgtgctacaccacg
ctcctacggcccggggccgcccagaaactgggcctgaccgaggatcagttcatcaagacg
cccacgggggacgagtttgtgaagacggcggtgcggaaggggctgctgccccagatcctg
gagaacctgctcagcgcccggaagagggccaaggccgagctggccagggagacagacccc
ctacggcggcaggtcttggacgggcggcagctggcactgaaagtgagtgccaactctgtg
tacggcttcaccggtgcccaggtgggcaagctgccgtgcctggagatctcacagagcgtc
actgggttcgggcgccagatgattgagagaacgaagcagctcgtggagtccaagtacacg
gtggagaacagctacagtgccaatgccaaggtggtgtatggtgacactgactctgtcatg
tgccgatttggcgtctcctctgtggctgaggccatggccctgggacgggaggctgcggac
tgggtgtctggccacttcccctcacccatccggctagagtttgagaaagtctatttcccg
tacctgctcatcagcaagaagcggtacgcgggcctgctcttctcctcccggtgcgacacc
catgaccgcatggactgcaagggcctggaggccgtgcgcagggacaactgccccctagtg
gccaacctcgtcaccgcctctctgcgccgcctgctcatcgaccgagaccccgcgggcgcc
gtggcgcatgcgcaggacgtcatctccgacctgctgtgtaaccgcatcgacatctcacag
ctggtcatcaccaaggagctgacccgcgcagccgcagactacgcgggcaagcaggcccat
gtggagctggctgagaggatgaggaagcgggaccccgggagtgcgcccagcctgggtgac
cgtgtcccctacgtgatcatcagtgccgccaagggcgtggccgcctacatgaagtccgag
gaccccctcttcgtgctggagcacagcctgcccatcgacacgcaatactaccttgagcag
cagctcgccaagcctctcctgcgcatcttcgagcccatcctgggcgagggccgagccgag
gccgtgctgctgcgcggggaccacacgcgctgcaagacagtactcacgggcaaggtgggc
ggcctcctggccttcgccaaacgccaaaactgctgcattggctgccgcactgtcctcagc
caccagggagccgtgtgcaagttctgcgaagcccgggggtcggagctgtatcagaaggag
gtatcccacctgaacgccctggaggagcgcttctcgcgcctctggacccagtgccagcgc
tgtcagggcagcctgcacgaggacgtcatctgcaccagccgcgactgccccatcttctac
atgcgcaagaaggtgcggaaggacctgcaggaccaggagcagcttctgaggcgcttcggg
ccccccggccccgaggcctggtga
DBGET
integrated database retrieval system
