Lipotes vexillifer (Yangtze River dolphin): 103086471
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Entry
103086471 CDS
T03090
Symbol
PCDHB16
Name
(RefSeq) protocadherin beta-16
KO
K16494
protocadherin beta
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lve04515
]
103086471 (PCDHB16)
Cell adhesion molecules [BR:
lve04515
]
Cadherins
Protocadherins
103086471 (PCDHB16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
VWA_3_C
API5
Motif
Other DBs
NCBI-GeneID:
103086471
NCBI-ProteinID:
XP_007461554
UniProt:
A0A340XQC1
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MEIGWMHNPRQRQVLVFFVLLSMYGASAELGPYSVVEETERGSFVANVGKDLGLGLTEMS
TRGARIISQWNKEHLQLKVQTGDLLINDKLDREKLCGPSEPCILHFQVLMEKPLEIFQAE
LRVKDINDHSPVFTEREMILKIPENSPIGISFPLSNALDLDVGSNNVQNYKISPNSHFRV
LTQNRSDGRKYPELVLDKELDREEEPEISLTLIALDGGSPPRYGTAQVHIEVVDSNDNAP
EFEQSLYKVHIPEDSPIGSLVVTVSASDVDSGVYGKISYTFFQPSEDISKTLEVNPMTGE
IRLRKKVDFETVLSYEVDIKATDGGGLSGKCTLLLQVVDVNDNPPEVTVSALTTPIPENS
PDIVVAVFSVSDPDSGDNGKTISSIQDDLPFLLKPSVKNFYTLVTQKTLDREERAEYNIT
ITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLSVRENNSPALHIGSVRATDRDA
GANAQVTYSLLPPLDPHVPLASLVSINPDNGHLFALRSLDYEALRAFEFRVGAADRGSPA
LSSQALVRVLVADDNDNAPFVLYPLQNASAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLLVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPAPEAEAADAAPAAPLTVYLVVALASVSSLFVFSVLVFVAVRLCRRGGA
ASVGRCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLTGGSGSNEFKFLKPILPNLPPQCP
GKEIEENRTFYNSFGFNIQ
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggagattggatggatgcacaatccgagacaaaggcaagtcctagttttctttgttttg
ctgagcatgtatggggcgagcgcagagttggggccctattcagtagtggaagaaacagag
agaggttcctttgtggcaaatgtaggaaaagacctggggctggggttgacagagatgtcc
acccgcggtgcccggatcatttcccagtggaacaaagagcatttgcagctcaaggttcag
actggggatttgctcataaatgacaaactagatcgagagaagctgtgcggtccgagtgag
ccttgcatactacatttccaagtattaatggaaaaaccgttagagatatttcaggcagaa
ctgagagtgaaagacataaatgaccattcccccgtgttcactgaaagagaaatgattcta
aaaataccggaaaacagtcctataggaatttcattccctctgagtaatgctctggacttg
gatgtaggcagcaacaatgttcagaactataaaatcagccccaactcccattttcgggtt
ctaacccaaaatcgcagcgatggcagaaaataccctgagctggtgttggacaaagagctg
gatcgggaggaggagcctgaaatctcattaaccctgatagcgctggatggcggctctccg
cctcggtatggaaccgcccaggtgcacattgaagtggtggacagtaacgataatgcccct
gagtttgagcagtcgctctacaaggtgcatattcccgaagacagccccataggctccctg
gttgtcactgtctctgccagcgatgtagacagtggagtctatgggaaaatatcatacaca
ttctttcagccttcagaagatattagtaaaactttggaggtaaatcctatgacaggtgaa
attcgactgagaaaaaaagtagattttgaaacagttctgtcttatgaagtggacatcaag
gccactgatgggggaggtctttcaggaaaatgcactcttctcctgcaagtagtggatgtg
aatgacaatcctccagaagtgacagtgtccgcactcaccactcccatcccagagaactcc
cctgacattgtagttgctgttttcagtgtttcagatcctgactctggggacaatgggaaa
actatttcctccatccaggatgaccttccttttcttctaaaaccttcagtcaagaacttt
tacaccttagtaacccagaaaacactagatagagaagaaagagccgagtacaacatcacc
atcaccgtcacagatatgggaacccccaggctgaaaaccgagcacaacataaccgtgctg
gtgtccgacgtcaacgacaacgcccccgccttcacccagacctcctacaccctgtccgtc
cgcgagaacaacagccccgccctgcacatcggcagcgtccgcgccacagacagagacgcg
ggcgccaacgcccaggtcacctactcgctgctgccgcccctcgacccgcacgtgcccctg
gcctccctggtatccatcaacccggacaacggccacctgttcgccctgaggtccctggac
tacgaggccctgcgggcgttcgagttccgcgtgggcgccgccgaccgcggctcgcccgcg
ctcagcagccaggcgctggtgcgcgtgctcgtggcggacgacaacgacaacgcgcccttc
gtgctgtacccgctgcagaacgcctcggcgccctgcaccgagctggtgcccagggcggcc
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcgtaccagctgctcaaggccacggagcccggcctcttcggcgtgtgggcgcac
aacggcgaggtgcgcacggcccggctgctgagcgagcgcgacgcggccaagcacaggctg
ctggtgctggtcaaggacaacggcgagccgccgctctcggccagcgtcacgctgcacgtg
ctgctggtggacggcttctcgcagccctacctgccggccccggaagcggaagcggcggac
gcggccccggccgccccgctcaccgtctacctggtggtggccttggcgtcggtgtcgtcg
ctcttcgtcttctcggtgctggtgttcgtcgcggtgcggctgtgcaggaggggcggggcg
gcctcggtgggtcgctgctcggtgcccgagggcccctttccgggccacctggtggacgtc
agcggcacggggaccctgtcccagagctaccagtacgaggtgtgtctgacgggaggctct
gggagtaatgagttcaaattcttgaagccgattctccccaacctcccgccccaatgccct
gggaaagaaatagaggaaaatcgtaccttctacaatagctttgggttcaatattcagtga
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