Lipotes vexillifer (Yangtze River dolphin): 103086976
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Entry
103086976 CDS
T03090
Symbol
ABCA4
Name
(RefSeq) LOW QUALITY PROTEIN: retinal-specific ATP-binding cassette transporter
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103086976 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lve02000
]
103086976 (ABCA4)
Transporters [BR:
lve02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
103086976 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_15
AAA_23
AAA_22
SRP54
AAA_29
ZER1-like_2nd
Motif
Other DBs
NCBI-GeneID:
103086976
NCBI-ProteinID:
XP_007468170
UniProt:
A0A340Y9L4
LinkDB
All DBs
Position
Unknown
AA seq
2279 aa
AA seq
DB search
MGFARQIKLLLWKNWTLRKRQKIRFVVELVWPLSLFLVLIWLRNVNPLYSQHECHFPNKA
MPSAXXXAGMLPWLQGIFCNVNNPCFQSPTPGESPGIVSNYNNSILARVYQDFQELLTDA
PESQHLGQVWTELCTLSQLMNTLRVHPERIAGRGIRIRDVLKDEETLTLFLIKSISLSDS
VVYLLVNSQVRPEQFAHGVPDLVLKDIACSEALLERFLIFPQRRAAQTVRGALCSLSQGT
LQWMEDTLYANVDFFKLFHVLPKLLDSSSQGINLRSWGRILSDMSPRIQEFIHRPSVQDL
LWVTRPLVQTGGPETFTQLMGTLSDLLCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSTRK
DPIYSYDKRTTTFCNALIQSLESNPLTKIAWRAAKPLLMGKILFTPDSPAIRRILKNANS
TFEELERFRKLVKAWEEVGPQIWYFFDKSMQMTMIRDTLENPTVKASWNRQLGEEGITAE
AILNFLYRGPRERQADDMDNFAWRDIFNITDRTLRLANQYLECLILDKFESYDDEFQLTQ
RALSLLEENRFWAGVVFPDMYPWTSSLPPHVKYKIRMDIDVVEKTNKIKDRYWDSGPRAD
PVEDFRYIWGGFAYLQDMVEQGITRSQAQAEVPVGIYLQQMPYPCFVDDSFMIILNRCFP
IFMVLAWIYSVSMTVKSIVLEKELRLKETLKNQGVSNTVIWCTWFLDSFSIMSMSICLLT
IFIMHGRILHYSNPFILFLFLLAFSTATIMQCFLLSTFFSRASLAAACSGVIYFTLYLPH
ILCFAWQDRMTADLKLAVSLLSPVAFGFGTEYLARFEEQGLGLQWNNIGNSPMEGDEFSF
LMSMKMMLIDAVLYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWQGGEGCSTREERALEK
TEPITEENEDPELLQEIQDCFFERELPGLVPGVCVKNLVKIFEHHGRPAVDHLNITFYEN
QITAFLGHNGAGKTTTLSILTGLLPPTSGTVLIRGKDIETSLHAIRQSLGMCPQHNILFH
HLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEAQHLSGGMQRKLSVAIAF
VGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADILGDRIAIIAQG
RLYCSGTPLFLKNCFGTGFYLTLVRKMKTIQSQGGGCEGTCSCVSKGFSIRCPSCVDEIT
PEQVLDGDVNELMDMVCHHVPEAKLVECVGQELIFLLPNKNFKQRAYASLFRELEETLAD
LGLSSFGISDTPLEEIFLKVTEDCESGPLFAGGTQQKRENISLRHPCLDSSRKASQTPQG
SNRHPTEPAAPPEQDGHSRLNTGVQLALQHVQALLVKRFHHTVRSHKDFLAQIVLPATFV
FLALMLSIIIPPFGEYPALTLHPWMYGQQYTFFSMDQPDSERLMVLADVLVNKPGFGNRC
LKEEWLPAFPCGNSTPWKTPSVSPDVTHLLQKQIWTADHPSPSCRCSTREKLTMLPECPE
GAGGLPPPQRIQRSTEILQDLTDRNISDFLVKTYPALIRSSLKSKYWVNEQRYGGISIGG
KLPAPPITGEALVGFLSDLGQLMNVSGGPITREASKEMSAFLKHLETEDNIKVWFNNKGW
HALVSFLNVAHNAILRASLHEDRNPEEYGITVVSQPLNLTKEQLSEITVLTTSVDAVVAI
CVIFAMSFVPASFVLYLIQERVNKAKHLQFVSGVSPTIYWLTNFLWDIMNYTVSAALVVG
IFIGFQKKAYTSSDNLPALVALLMLYGWAVIPMMYPASFLFDVPSTAYVALSCANLFIGI
NSSAITFILELFENNRTLLRLSAVLRKLLVIFPHFCLGRGLIDLALSQAVTDVYARFGEE
HSSNLFQWDLIGKNLVAMAIEGLVYFLLTLLIQYQFFFSLWTAEPAKEPIIDEDDDVAEE
RQRIISGGNKTDILRLNELTKIYSGSSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKM
LTGDSTVTSGDATVAGKSILTNISDVHQSMGYCPQFDAIDDQLTGREHLYLYARLRGVPA
EKIKRVTNWSIQSLGLSLYADRLAGTYSAGNKRKLSTAIALIGCPLLVLLDEPTTGMDPQ
ARRMLWNTIMSIIREGRAVVLTSHSMEECEALCTRLAIMAKGTFQCLGTIQHLKYKFGDG
YIVTMKIKSPKDDLLPDLGPVEQFFQGNFPGSVQRERHYNMLQFQVSSSSLARIFRLLVS
HKDRLLIEEYSVTQTTLDQVFVNFAKQQTETHDLPLHPRAAGASRQAKEVDKGNSAPQG
NT seq
6840 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgctagacagatcaagcttctgctctggaagaactggaccctgcggaaaagg
caaaagattcgctttgtggtggaacttgtgtggcctttatctttatttctggtcctgatc
tggttaaggaatgtcaacccactctatagccaacatgaatgccattttcccaacaaggcg
atgccctcagcannnnnnnnngcaggaatgttgccatggctccagggaattttctgcaat
gtgaacaatccttgttttcaaagtcccaccccgggagaatctcctggaattgtgtcaaac
tataacaactccatcttggcaagggtttatcaagattttcaagaactcctcacggatgca
ccagagagccagcaccttggccaggtttggacagagctctgcaccttgtcgcaactcatg
aacaccctccgggtgcaccccgagaggattgcaggaagaggaatacgaatacgggatgtc
ctaaaagatgaggaaacgctgacactgtttctcataaagagcattagcctgtctgattca
gttgtctaccttctggtcaactcccaagtccgtccagagcagtttgctcatggagtccca
gacctagtgctgaaggacatcgcctgcagtgaggccctcctggagcgcttcctaatcttc
ccccagcgccgtgcggcgcagacagtgcgtggtgcgttgtgctccctctcccagggcacc
ctacaatggatggaggacaccctgtacgccaacgtggacttcttcaagctcttccatgtg
cttcccaaactcctggacagcagttctcaaggtatcaatctgagatcgtggggaagaata
ttatctgatatgtcgccaagaattcaagaattcatccaccgaccaagtgttcaagacttg
ctgtgggtgaccaggccactcgtgcagactggtggtccagagaccttcacacagctgatg
ggcaccctgtctgacctcttgtgtggctacccagagggaggaggctctcgggtgttctcc
ttcaactggtacgaagacaataactataaagccttcctggggattgactccacaaggaaa
gatcctatctattcttatgacaaaagaacaacaaccttttgtaatgcattgatccagagc
ctggagtcaaaccctctaaccaaaatagcctggagggcagcaaagcctttgctgatggga
aaaatcctctttactccggattcccccgcaatacgcaggatactgaagaacgccaactcg
acatttgaagagctggagcgtttcaggaagttggtcaaagcctgggaagaagtagggccc
cagatctggtacttctttgacaagagcatgcagatgaccatgatcagagacaccctggag
aacccaacagtaaaagcttcttggaataggcagcttggtgaagaaggtattactgccgaa
gccatactgaacttcctctataggggtccacgagagcgccaggctgatgacatggacaac
ttcgcctggagggatatatttaacatcactgatcgcacactacgcctggctaatcaatac
ctggagtgcttgatcctggataagtttgaaagctacgatgatgaatttcaactcacccaa
cgagccctgtctctgctggaggaaaacaggttctgggctggtgtggtatttcctgacatg
tatccctggaccagctccctaccaccccacgtgaagtacaagatccgaatggacatagat
gtggtggagaaaaccaataagatcaaagacagatactgggattctggccccagagctgat
cctgtggaagacttccgatacatctggggtgggtttgcctatctgcaggacatggttgaa
caggggatcacaaggagtcaggcccaggctgaggttccagttggaatctacctccagcag
atgccttacccctgcttcgtggatgactcttttatgatcatcttgaaccgctgtttccct
atcttcatggtgctggcctggatctactctgtctccatgactgtaaagagcatcgtcttg
gagaaggagttgagactgaaggagaccttgaaaaatcagggtgtctccaacacagtgatt
tggtgtacctggttcctggacagcttctctatcatgtcgatgagcatctgtctcctgacg
atattcatcatgcatggaaggatcctgcattatagcaatccattcatcctcttcctgttc
ctgttggctttctccactgctacaatcatgcagtgcttcctgctcagcaccttcttctcc
agggccagcctggcagcagcctgtagtggtgtcatctacttcaccctctacctgccgcac
attctctgctttgcttggcaggacagaatgacggccgacctgaagctggctgtgagcctg
ctgtctcctgtggcatttgggtttggtactgagtacctggctcgctttgaagagcaaggc
ctggggctacagtggaacaatattgggaatagtcccatggaaggggacgaattcagtttt
ctgatgtccatgaagatgatgcttattgatgctgttctgtatggcttgcttgcctggtat
cttgaccaggtgtttccaggggactatggaaccccacttccttggtacttccttctacaa
gagtcttattggcaaggtggtgaagggtgttcaaccagagaagaaagggccttggaaaag
acggaacccataacggaagaaaatgaggatcctgagctgttacaagaaatccaagactgc
ttctttgaacgtgagctcccaggcttggttcccggggtgtgtgtgaagaatctggtaaag
atttttgagcaccatggcaggccagctgtggaccatcttaacattaccttctatgaaaac
cagatcaccgcgtttctcggtcacaatggagcagggaaaaccacgaccttgtccatcctg
acgggtctgttgccaccgacatccgggactgtgctcattaggggaaaggacattgaaacc
agcctgcatgctatccggcagagccttggcatgtgtccacagcacaacatcctgttccac
cacctcacagtggctgaacacatcctattctacgcacagctgaaagggaggtcctgggag
gaggcccagctggagatggaagccatgctggaggacacaggcctccaccacaagaggaac
gaagaagctcagcatctctcaggtggcatgcagaggaagctgtccgttgccattgccttc
gtgggagatgccaaggtggtggttctggatgagcccacctctggggtggatccctactcg
aggcgctcaatctgggacctgctcctgaaatatcgctcaggcagaaccatcatcatgtcc
actcaccacatggacgaggccgacatcctcggggaccgcatcgccatcatagcccaggga
cggctctactgctccggcaccccgctcttcctaaagaactgctttggcacaggcttctac
ttaaccttggtgcgcaagatgaagaccatccagagccaaggaggaggctgtgaggggacc
tgcagctgtgtgtctaagggtttctccatcaggtgtccatcctgcgtcgatgagataact
ccagaacaagtcttggacggggatgtgaatgagctgatggatatggtttgccaccatgtt
ccggaggcgaagctggtggaatgtgttggtcaagagctcatcttccttcttcccaataag
aatttcaagcagagggcatacgccagccttttcagagagctggaggagaccctggctgac
ctggggctcagcagttttggaatttctgacactcccctggaagagatttttctgaaggtc
acggaggattgtgagtcaggacctctgtttgctggcggcactcagcagaaaagagaaaac
atcagtcttcgccacccctgtttggattctagcaggaaggccagccagactccacagggc
tccaaccggcaccccacggagcccgctgctcccccggagcaggatgggcacagccgactt
aacacgggagtgcagctggccctccagcacgtgcaggcgctgctggtcaagcggttccac
cacactgtccgcagccacaaggacttcctggcccagattgtgctcccggccacttttgtg
tttctggctctgatgctttccatcatcatccctccttttggcgaatatcctgctttaacc
cttcacccctggatgtatgggcagcagtataccttcttcagcatggaccagccggacagc
gagcggctcatggtacttgcagacgtcctcgtgaataagccaggctttggcaaccgctgc
ctgaaggaagagtggcttccggcgttcccctgtggcaattcaaccccctggaagactccc
tctgtgtccccggatgtcacccacctgctccagaagcagatatggacagcagaccacccc
tcgccttcctgcaggtgcagcaccagagagaagctcaccatgctccccgagtgccctgag
ggcgcaggggggctcccaccccctcagagaatacagcgcagcactgaaattctacaagac
cttacagacaggaacatctcggacttcttggtaaaaacgtatcctgctcttatacgaagc
agtttgaagagcaaatactgggtcaatgaacagaggtacggaggaatttccattggagga
aagctcccggctccccccatcactggagaagcccttgttggatttttaagtgaccttggc
cagttaatgaatgtgagcgggggccctatcaccagagaagcctctaaagaaatgtctgct
ttccttaaacatctagaaactgaagacaacattaaggtgtggtttaacaacaaaggctgg
catgccctggtcagcttcctcaacgtggcccacaacgccatcttacgggccagcctgcat
gaggacaggaaccccgaggagtatggcatcaccgttgtaagccagcctctgaacctgacc
aaggagcagctctccgaaattacagtgctgaccacttctgtggatgctgtggtggccatc
tgtgtgatttttgccatgtccttcgtccctgccagcttcgtcctttatttgatccaggag
agggtgaacaaagctaagcacctccagtttgtcagtggagtgagccccaccatctactgg
ctgaccaacttcctctgggacatcatgaattacactgtgagcgctgcactggtggtgggc
atcttcatcgggtttcagaagaaagcctacacttcttcagacaatcttccagccctggtc
gcactgctcatgctctacggatgggcagtcattcccatgatgtacccagcatccttcctg
tttgatgtccccagcacagcctatgtggccttatcttgtgctaatctgttcatcggcatc
aacagcagtgccatcaccttcatcttggaattatttgagaataaccggacactgctcagg
ctcagtgccgtgctgaggaagctgctcgttatcttcccccacttctgcctgggccggggc
ctcattgacctggcactgagccaggctgtgacagacgtctatgcccggtttggtgaggag
cactcttcaaatctgttccagtgggacctgattgggaagaacctggttgccatggcaata
gaagggttggtgtacttcctcctgaccctcctcatccagtaccaattcttcttcagccta
tggactgccgagcctgctaaggagcctatcatagatgaagatgatgatgtggctgaagaa
agacaaagaattattagtggaggaaataaaactgatatcttaaggctaaatgaactaacc
aagatttattcaggcagctccagcccagcggtggacaggctgtgtgtgggagtccgcccc
ggagagtgctttggcctcctgggagtgaatggagctggcaaaacaaccacattcaagatg
ctcactggggacagcacggtgacgtcaggtgatgccactgtcgcaggcaagagtatttta
accaatatttctgacgtccatcaaagtatgggctactgtcctcagtttgatgcaatcgat
gaccagcttacagggcgagaacatctttacctttatgcccggcttcgaggtgtaccagca
gagaaaatcaagagggtgacaaactggagtattcagagcctgggcctgtctctctacgca
gaccgcctggccggcacctacagtgcaggcaataagcggaaactctccacagccattgca
ctgataggctgcccactgctggtgctactggatgaacccaccacaggcatggacccccag
gcacgccgcatgctgtggaacaccatcatgagcatcatcagagaagggagagctgtggtc
ctcacttcccacagcatggaagagtgcgaggccctgtgtacccggcttgccatcatggcg
aagggcacctttcagtgtctgggcaccattcagcacctcaagtacaagtttggagatggc
tacatcgtcacaatgaaaatcaaatccccgaaggacgacttgcttcccgacctgggtcct
gtggagcagttcttccagggcaacttcccaggcagcgtgcagagggagaggcactacaac
atgctgcagttccaggtctcctcctcctccctggccaggatcttccggctgctcgtctcc
cacaaggacaggctgctcatcgaggagtactcagtcacgcagaccacgctggaccaggtg
tttgtgaactttgctaagcagcagactgaaactcatgacctccctttgcaccctcgagct
gctggagccagtcgacaggccaaggaagtggacaaagggaattctgcacctcaaggatga
DBGET
integrated database retrieval system
