Lipotes vexillifer (Yangtze River dolphin): 103087147
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Entry
103087147 CDS
T03090
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103087147 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lve03041
]
103087147 (PRPF38B)
Spliceosome [BR:
lve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
103087147 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
103087147 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
103087147
NCBI-ProteinID:
XP_007449400
UniProt:
A0A340WR06
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MANNSPALTGNSQPQHQAAAAAAQQQQQCGGGGATKPAVSGKQGNVLPLWGNEKTMNLNP
MILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVG
TGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFES
FLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPRKI
KKDGKESAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKE
RQRLEREAKEREKERRRSRSIDRGLERRHSRRRERHRSRSRSRDRKGDRRDRDREREKEN
ERGRRRDRDYDKERGNDREKERSRERSKERRSRGEVEEKKYKEDKDDRRHRDDKKDSKKE
KKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSV
DKSRKREHSPSKEKSRKRSRSKERSHRRDHSDSKDQSDKHDPRRSQSIEPESQEKQHKNK
EETV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcagcaccaggcggccgca
gccgcggcccagcagcagcagcagtgcggcggcggtggcgctaccaagccagcagtctcg
ggcaagcagggcaatgtgctgccgctgtggggcaacgaaaagactatgaatctcaacccc
atgatcttgaccaatatcctgtcgtcgccttacttcaaagtgcagctctatgagctcaag
acctaccacgaggtggtggacgagatctactttaaggtcacacatgttgaaccatgggag
aaaggaagcaggaaaacagctggccaaacagggatgtgcggaggggttcgaggcgttggg
acaggaggaattgtttctacagctttttgcctgttatacaaattatttactctgaagtta
actcgcaagcaagtgatgggtcttataacacacacagactctccatatattagagccctt
ggatttatgtatataaggtacacacagccccctacagatctatgggattggtttgaatcc
ttccttgatgatgaagaggacctagatgtgaaggctggtggaggctgtgtaatgaccatt
ggagaaatgctacggtcttttctcacaaaactggagtggttttccaccttgtttccaaga
attccggttccagttcagaagaatattgatcaacagattaaaacccgaccgagaaaaatc
aagaaagatggaaaggaaagcgctgaggaaatagacagacatgttgaacgcaggcgttca
aggtctccaaggagatcgctgagtccacggaggtccccaagaagatccagaagtagaagc
catcatcgggagggccatgggtcttctagttttgaccgagaattagaaagagagaaagaa
cgccagcgactagagcgtgaagccaaagaaagggaaaaagaaaggcgaagatcccgaagt
attgatcgggggctagaacgcaggcatagcaggagaagggaaagacatagaagccgtagt
cgaagtcgtgataggaaaggggatagaagggacagggatcgggaaagagagaaagaaaat
gagagaggtagaagacgagatcgtgactatgataaggaaagaggtaatgaccgagaaaag
gagagatcaagagaacgatccaaggaacggagaagtaggggtgaggtagaagaaaagaaa
tataaagaagacaaagatgataggcggcatagagatgacaaaaaagattccaagaaagag
aaaaaacatagtagaagtagaagcagagaaagaaaacatagaagtaggagtagaagtaga
aatgcagggaaacgaagtagaagtaggagcaaagagaaatcaagtaaacataaaaatgaa
agtaaagaaaaatcaaataaacggagtagaagtggcagtcaaggaagaactgacagcgtt
gacaaatcaagaaaacgggaacatagccccagcaaagaaaaatctaggaagcgtagcaga
agcaaagaacgttcccacagacgagatcacagtgatagtaaggaccagtctgacaaacat
gatccccgaaggagccaaagcatagaaccagagagccaagaaaaacaacataaaaacaaa
gaggagactgtgtga
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