Lipotes vexillifer (Yangtze River dolphin): 103087407
Help
Entry
103087407 CDS
T03090
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lve03037
]
103087407 (CCDC88A)
Cilium and associated proteins [BR:
lve03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
103087407 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
APG6_N
Motif
Other DBs
NCBI-GeneID:
103087407
NCBI-ProteinID:
XP_007465725
UniProt:
A0A340Y2T3
LinkDB
All DBs
Position
Unknown
AA seq
2026 aa
AA seq
DB search
MENEIFTPLLEQFMTSPLVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNQVMLQINPKSE
SQRVNKKVNNDASLRIHNLSILVRQIKFYYQETLQQLIMMSLPNVLIIGKNPFSEQGTEE
VKKLLLLLLGCAVQCQKKEEFIERIQGLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTD
MSQEEIEPLLKNMVLHLKRLIDERDEHSETIVELSEERDGLHFPPHASSSAQSPCGSPGM
KRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLS
DARSARMYRDELDALREKAVRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETK
TMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMEHDMDRKKIEELMEENMTLEMAQK
QSMDESLHLGWELEQISRTSELSEAPQKSLGHEVNELTSSRLLKLEMENQSLTKTVEELR
STMDSAEGTTSKILKIEKENQRLSKKVEILENEIIQEKQSLQNCQNLSKDLMKEKAQLEK
TIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIKETS
SKLSKIEFEKRQIRKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEA
LEQENSELERENRKYKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKM
AQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQ
QLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKR
LRQQAEIKDTTLEENNVKIGNLEKENKTLFKEIGIYKESCIRLKELEKENKELVKRATID
IKTLVTLREDLVSEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDRYKLLESKL
ESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEEKMVQSSP
PVSGEDNKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQA
QILALQRQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENES
VIKEREDLKSLYDSLIKDHEKLELLHERQASEYESLIAKHGTLKSAHKNLEVEHKDLEDR
YNQLLKQKGQLEDLEKTLKVEQEKMLLKNKNHETVAAEYKKLCGENDRLNHTYNQLLKET
EVLQTDHKNLKSLLNSSRLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNLE
EENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQY
KFYDPSPPRRRGNWITLKMRKLIKSKKDINRERQKSLTLTPTRSDSSEGFLQLPHQDSQD
SSSVGSNSLEDGQTLGTKKSSMVALKRLPFLRNRPKDKDKMKACYRRSMSMNDLVQSMVL
AGGQWTGSTENLEVPDDIATGKRRKELGAMAFSTTAINFSTVNSSTGFRSKQLVNNKDTT
SFEDVSPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEVKAGAVNIQSRPQS
HSSGEFSLLHEHEAWSSSGSSPIQYLKRQPKSSPVLQHKTLESRAHHKVKTGSPGSEVVT
LQQFLEESNKLTSIQIKPSSQENLLDEVMKSLSVSSDFLGKNKPVSCGLARSVSGKTPGD
FYDRWTTKPEQFVRPGPQKTEDTYFISSSGKPTLGTQGKIKVVKETSLSRQSKDSNPYAT
LPRASSVISTAEGTTRRTSIHDFLTKDSRLPMSVDSPPATADSSITATSSEYRLHQWSSH
PLHSPTYAVGSQAQNDLATDKPTSPYAQARNSRTERSHFLNQTFATVNMSNDAFGISAKD
SIDSFTVAHPSQPFLSLNTELVSNISGLPPRPVTRLTDQASASLDKAAQKDTEQFSDNQN
CSNSNPQSSVVSNNLITPACLYPDDTEAALLVSEDNQTVWYEYGCV
NT seq
6081 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgagatttttactccccttctggagcagttcatgaccagccccttggtcact
tgggttaaaacgtttggacctctggctgcaggaaatgggaccaacctggatgaatatgtg
gctttggtggatggggtgttcttgaaccaagtcatgctccaaattaatcctaagtcggag
agtcagagagtaaataaaaaagtcaacaatgatgcctcacttagaattcataatctatcc
attttggtgagacagataaaattttattaccaggagactttgcagcagttgattatgatg
tctttgccaaatgtcttaatcattggcaaaaatcccttttctgaacaaggcacagaagaa
gttaaaaagttgcttttacttttactgggttgtgcagttcagtgtcagaaaaaagaagaa
tttattgaaagaattcaaggtttagattttgatacaaaagcagcagttgccgcacatatt
caagaggtaacccataatcaggaaaatgtgtttgatctacaatggatggaagtgactgac
atgtctcaggaggaaatagaaccactcttgaaaaacatggtattgcatctaaaaagactt
atagatgagagagatgagcattcagagactatcgttgaactctctgaagagcgggatggt
cttcattttccaccccatgcctcttcatctgcacagtcaccttgtggttctccaggcatg
aaacgaacagaaagtcgacaacatctgtcagtggaactggcagatgctaaggccaagata
agaaggcttaggcaggaattggaggaaaagactgaacagttgttggactgtaaacaagaa
cttgagcaaatggaaatagaactaaaaaggctgcaacaagagaacatgaatttgctttcg
gatgctcgttctgcaagaatgtatcgagatgaattagatgcgcttcgggagaaggctgtc
agagttgataagcttgaaagtgaagttagcagatacaaagaaaggctacatgatattgaa
ttttataaggcaagagttgaggaattaaaagaagacaatcaagttttattagaaacaaaa
accatgttggaagaccaattagaaggaactcgagctcgttctgataaattacatgaatta
gaaaaagaaaatttacaactgaaggctaaactgcatgatatggaaatggagcatgatatg
gatagaaaaaagattgaagaattaatggaagaaaatatgactttggaaatggcacagaaa
caaagtatggacgaatcattacatcttggctgggagctggaacaaatatccagaactagt
gaactttctgaagcaccacagaaatccttgggccatgaggtaaatgaattgacatcaagt
aggttgttgaagttggagatggaaaatcagagtttgacaaaaactgtagaagagcttcgg
agtactatggattctgcagaaggcaccacttccaaaatcctgaaaattgaaaaagaaaat
caaagactaagtaagaaggttgaaattcttgaaaatgagattattcaagaaaagcaaagt
cttcagaactgtcagaatttaagcaaggatctaatgaaggagaaagctcagcttgaaaaa
acaattgaaacacttagagaaaattcagagagacagattaaaatattggaacaggaaaat
gaacatctgaatcaaactgtgtcctccttaaggcagcgctcccagataagtgctgaagca
agggtgaaagacattgaaaaagaaaataaaattctccatgaatctatcaaggaaaccagt
agcaagctaagcaagattgaatttgaaaaaaggcaaatcagaaaagaattggaacattat
aaagaaaaaggagaacgagcagaagaacttgaaaatgagttacatcatcttgaaaaagaa
aatgaattgttacagaaaaagataaccaatttaaaaattacttgtgaaaaaattgaggcc
ttagaacaagaaaattcagagctagaaagagaaaataggaaatataaaaaaacattggat
agctttaaaaaccttacttttcagttagaatccctagagaaagagaattcccagcttgat
gaggaaaacttagaactgcgaaggaatgtagaatctttaaagtgtgcaagcatgaaaatg
gctcagctacaactagaaaacaaagaactggaaagtgaaaaagaacaacttaagaaaggt
ttagagctcatgaaagcatctttcaagaaaacagaacgcttagaggttagctaccagggt
ttagatacagaaaatcaaaggctacagaaagctctagaaaacagcaataaaaaaattcag
cagttggaaagtgaactacaagacttagagatggaaaatcaaacattgcaaaaaaaccta
gaagagttaaaaatatctagcaaaagactagaacagctagaaaaagaaaacaaatcatta
gaacaagagacttctcaactggaaaaggataagaaacaactggagaaggaaaataagaga
ctccgacaacaagcagaaataaaagataccacattagaagaaaataatgtgaaaattgga
aatttggaaaaagaaaacaaaacccttttcaaagagattggtatttataaagaatcctgc
attcgtctgaaagaattagagaaagaaaataaggagcttgtgaaaagagcaactattgat
ataaaaactttagtcacattacgagaggatttggtgagtgaaaaactgaagactcaacaa
atgaataatgatcttgaaaaattaactcatgagcttgagaagatagggttaaataaagag
cgactcttacatgatgagcagagtactgatgacagatacaaacttttggaatcaaaatta
gaatctactctaaagaagtcccttgaaataaaagaagaaaaaatcgctgcattagaagct
cgattagaagagtccacaaattataaccagcagttgcgccaagaacttaaaacagtgaaa
aagaattatgaagctctcaagcagagacaagatgaggaaaagatggtacagagctctcct
ccagtttctggtgaagataacaaatgggagcgagaaagtcaagaaacaaccagagagctt
ctgaaagttaaagacagattaattgaagttgaaagaaataatgctacactacaagcagag
aagcaagcattgaaaactcaactgaagcaacttgagacacagaacaataatttgcaggct
cagattcttgcacttcagaggcagacagtatcattacaggagcagaataccactcttcaa
acacagaatgccaagcttcaggttgaaaattccactcttaattcccaaagtacctcactc
atgaaccagaatgcacaactcctaatccagcagtcttccttagaaaatgaaaatgaatct
gtaatcaaagaacgagaagacctgaaatctctctatgattctctgatcaaagatcatgaa
aagctggaacttctgcatgaacgacaggcttcagagtatgagtctctcattgctaaacat
ggaactctaaagtctgcccacaaaaatcttgaggtggaacataaagaccttgaagatcgt
tacaatcagttactaaaacagaaaggacaattggaagatttggaaaaaacactgaaggta
gaacaggaaaaaatgctgcttaaaaacaaaaaccatgaaactgtagctgcagaatacaag
aaactttgtggtgaaaatgataggttgaatcatacatataatcagcttttaaaagagact
gaagttttacaaactgaccataaaaacttgaaaagtcttctaaatagttccagactggaa
caaacaagattagaagctgaattttcaaagttaaaggaacaataccaacaactggacatc
acatccaccaagctaaataaccagtgtgagttgctaagccaacttaaaggaaatttagaa
gaggaaaatcgacatctactagatcaaattcagacattaatgctacagaacagaacacta
ttggagcagaatatggaaagcaaggatctttttcatgttgaacaaagacagtacattgat
aagttaaatgaattaagacgacaaaaggagaaattagaagagaaaattatggatcaatac
aaattttatgacccatctcctcctagaaggagaggcaactggattactctaaaaatgaga
aaattgataaagtctaagaaagacattaatcgggagcgtcagaaatcactaacattaaca
ccaacccgctcagactccagtgaaggatttcttcaactcccccatcaagatagtcaagac
agttcttcagtaggttcaaactctttagaagatggccaaactctggggaccaagaaaagc
agcatggttgcactgaaaagactgccctttttgaggaacagaccgaaggataaagacaaa
atgaaggcctgctaccgtcgttccatgtccatgaatgacctggtgcagtccatggtccta
gcaggaggacagtggacaggtagtactgagaatttggaggttcctgatgatattgcaacg
ggtaaaaggagaaaagaattgggagctatggccttctctactacagccatcaacttttca
acagtcaactcttctacaggcttcagatccaagcagttggttaataataaagatactaca
tcctttgaagacgtaagtccacaaggtattagtgatgattctagtacgggatcaagagtt
catgcttcgagaccagccagccttgatagtggcagaacatccactagcaatagcaataat
aatgcttcactccatgaagtcaaagcaggtgcagttaatatccaaagcaggccacaaagc
catagcagtggagaatttagcctgcttcatgagcatgaggcgtggtccagcagtggtagc
agtccaatccaatacttgaaaagacagcccaaatcaagtccagtgctccagcacaaaaca
ctagagagtcgagcacatcacaaggtcaaaactggttcccctggaagtgaagttgttact
ctacaacagtttttggaagaaagcaacaagcttacctcaatacagataaagccctcaagt
caagagaatcttttagatgaagtaatgaaaagtttgtctgtctcttctgactttttggga
aaaaacaaaccagttagctgtggtctggccaggtcagtaagtggaaaaactccaggagac
ttctatgatagatggacaactaagcctgaacaatttgtgagacctggtcctcaaaagact
gaagatacctatttcattagttcttccggaaagcctacactaggcactcaaggaaagata
aaagtagtaaaagaaacttctctgtcacgacaatcaaaagatagtaatccctatgccact
ttacctcgtgcaagcagtgtgatctctactgctgaaggaactactcgaaggacaagcatc
catgattttttgaccaaggacagtagactacctatgtcagttgattcaccaccagctact
gctgatagcagcatcactgcaacatctagtgagtaccgtttacaccagtggtcctctcat
ccacttcacagtccaacttatgctgtaggttctcaagcacaaaatgatttagctacagac
aagcccacgtctccatatgcccaggccagaaactcaagaacagaaaggtcacattttcta
aaccaaacttttgccactgttaatatgtctaatgatgcatttggaatatcagctaaagat
agcatagactcatttactgtggctcatccatctcagccatttttatccctgaatacagaa
ttagttagtaacataagtgggctacctcccagaccagtcaccaggctaactgaccaggct
tctgcttctttggataaagctgcacagaaagatactgagcagttttctgataatcagaac
tgcagtaacagtaacccacagtcttctgtagttagcaataatcttatcactcctgcatgc
ctctatcctgatgacacagaagctgcattgttggtttctgaggataatcaaactgtttgg
tatgaatatggttgtgtatga
DBGET
integrated database retrieval system
