Lipotes vexillifer (Yangtze River dolphin): 103087418
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Entry
103087418 CDS
T03090
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04068
FoxO signaling pathway
lve05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
103087418 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
103087418 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lve04121
]
103087418 (RAG1)
Enzymes [BR:
lve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103087418 (RAG1)
Ubiquitin system [BR:
lve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103087418 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_10
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
103087418
NCBI-ProteinID:
XP_007466909
UniProt:
A0A340Y5B9
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MAVSLPPTLGLSSAPDEIQHPHIKFSEWKFKLFRVRSFEKTPENAQVEKQDSSEGKPSLE
QSPAVLDTPGGQKPALTQLALKPHPKFLKKSHDDRKARDKAMHQANLRQLCRICGNPFKA
DGHNRRYPVHGPVDGKTQVLLRKKEKRATSWPDLIAKVFRIDVKADVDSIHPTEFCHNCW
SFMHRKFSSAPCEAYSPRNATMEWSSHTTPCDICHIARQGLKRKGHQPSAQLSKKLRTVI
DRAQEVRRRKRRAQAGISSKELKKKIANCSKIHLSTQLLALDFPAHFVKSVSCQICEHIL
ADPVETSCKHVFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLSILNSLMVKCPA
KECNEEVSLEKYNHHVSSHKDSKETFVHINKGGRPRQHLLSLTRRAQKHRLRELKLQVKA
FADKEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLS
CSQYHKMYRTVKAITGRQIFQPLHALRSAEKVLLPGYHCFEWQPPLKNVSSSTDVGIIDG
LSGLSSSVDDYPVDTIAKRFRYDSALVSALMDMEEDILVGMRDQDLEDYLNGPFTVVVKE
SCDGMGDVGEKHGSGPAVPEKAVRFSFTIMKITIAHGSQNVKVFEEAKPNSELCCKPLCL
MLADESDHETLTAILSPLIAEREAMKSSKLMLEMGGILRTFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDATRLEASQNLVFHSITRSHVENLERYEVWRSNPYHETVEELRDRVK
GVSAKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPSASKEERKRWQAALDKHL
RKKMNLKPIMRMNGNFARKLMTKETVEAVCELIPSEERHEALRELMDLYLKMKPVWRSSC
PAKECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWA
SEGNESGNKLFRRFRKMNARQSKYYEMEDVLKHHWLYTSKYLQKFMNAHNSLKTSGFTIN
SQGSLGDSLDLEDSPESQNSMEF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctctttgccacccaccctgggactcagttccgccccagacgaaatccagcac
ccacatattaaattttcagaatggaaatttaagctattcagggtgagatcctttgaaaag
acacctgaaaatgctcaagtggaaaagcaagattcctccgaagggaaaccctctctagag
caatctccagcagtcctggacacgcctggtggtcagaaaccagctctgactcaactggca
ttgaagccccacccaaagtttctgaagaaatcccatgatgacaggaaagcaagagacaaa
gccatgcaccaagccaacctgcgacaactctgccgcatctgcgggaatcctttcaaagct
gatgggcacaataggagatacccagtccatgggcctgtggatggtaaaacccaagtcctt
ttacgaaagaaggaaaagagggccacgtcctggccagacctcattgccaaggttttccgg
atcgatgtgaaggccgatgtggactcgattcatcccactgagttctgccataactgctgg
agcttcatgcacaggaagtttagcagtgccccgtgtgaggcttactccccaaggaatgca
accatggagtggtcctcccacacaacaccctgtgacatctgccacattgcccgtcaggga
ctcaagaggaagggtcatcagccaagtgcgcagctcagcaaaaaactcagaactgtgatt
gaccgagctcaagaagtccgtcggcgcaagaggagagctcaggccgggatcagcagcaag
gaactgaagaagaaaatcgccaactgcagtaagatacatctcagtacccagctcctggca
ctggacttcccggcgcactttgtgaaatctgtctcctgccagatttgtgaacacattctg
gcggaccctgtagagaccagctgtaagcatgtattttgcaggatctgcattctcagatgc
ctcaaagtcatgggaagctattgtccttcttgccggtacccgtgcttccctactgacctg
gagagtccagtgaagtcttttctgagcatcttgaattccctgatggtgaaatgtccagcc
aaagagtgcaatgaggaggtcagcttggaaaaatataatcaccatgtctcaagccacaag
gactcgaaagagactttcgtgcatattaataaagggggccggccccgccagcatctcctg
tccctgacccggagggctcagaagcaccgtctgagggagctcaagctgcaagtcaaggct
ttcgctgacaaagaagaaggtggagatgtgaagtcagtgtgcctgaccttgttcctgctg
gctctgagggcaaggaatgagcacagacaagccgacgagctggaggccatcatgcaggga
cggggctccggcctgcagccggctgtttgcttggccatccgtgttaacaccttcctcagc
tgcagccagtaccacaagatgtacaggactgtgaaggccatcacaggcaggcagattttc
cagcctttgcatgcccttcggagtgctgagaaggtccttctgccgggctaccactgcttt
gagtggcagccacctctgaagaacgtgtcttccagcactgacgtgggcattattgatgga
ctgtctggactgtcctcctctgtggacgattacccggtggacaccatcgccaagcgcttc
cgctatgattcagctttggtgtctgctctgatggacatggaagaagacatcctggtgggc
atgagagaccaagaccttgaggactacctgaatggccccttcactgtagtggtgaaggag
tcttgtgatgggatgggagacgtgggtgagaagcacggcagtgggccagcagttccggaa
aaggcagttcggttttccttcacgatcatgaaaatcaccatcgctcacgggtcacagaat
gtgaaggtgtttgaggaagcgaaacctaactctgaattgtgttgcaagcccttgtgcctc
atgctggcagatgagtctgaccacgagaccctgacggccatcctgagccctctcattgcc
gagagagaggccatgaagagcagcaaattaatgcttgagatgggaggcatcctccggact
ttcaagttcatctttaggggcaccgggtatgatgagaaacttgtccgggaagtggaaggc
ctcgaggcttcgggctcagtctacatttgtaccctttgtgatgccacccgcctggaagcc
tctcaaaatctcgtcttccactccatcaccagaagccacgttgaaaatctggagcgctat
gaggtctggcgttccaacccataccatgagacggtggaggaactgcgggaccgggtgaag
ggggtctcggccaaacccttcattgagacggtcccttccatagatgcactccactgcgac
atcggcaacgcagctgagttctacaagattttccagctggagataggggaggtgtataag
aaccccagtgcctccaaagaggagaggaaaagatggcaggctgccttggacaagcacctc
cggaagaagatgaatctgaaaccaatcatgaggatgaacggcaactttgcccggaagctc
atgaccaaagagacggttgaagcagtttgtgaattaattccctccgaggagaggcacgaa
gctctgagggaactaatggacctttatttgaagatgaaacccgtctggcgatcctcatgc
cctgctaaggagtgcccagaatccctctgccagtatagtttcaattcacagcgttttgct
gagctcctctccaccaagttcaagtatagatacgagggcaaaatcaccaattattttcac
aaaaccctggctcacgtccctgaaattattgagagggatggctccattggggcctgggca
agtgagggaaatgagtctggcaacaaactgttcaggcgcttccggaaaatgaatgccagg
cagtccaagtactacgaaatggaagatgtcttgaaacatcactggttgtatacctccaaa
tacctgcagaagtttatgaatgctcataattcattgaaaacttcaggatttaccataaac
tcacagggaagcttaggggactcattagacctagaggactctccagaatctcaaaattca
atggaattttaa
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