Lipotes vexillifer (Yangtze River dolphin): 103087990
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Entry
103087990 CDS
T03090
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lve04990
]
103087990 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
lve04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
103087990 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
fn3
EGF_2
EGF_CA
Ig_DSCAM-DSCAML_C
EGF_Teneurin
cEGF
Motif
Other DBs
NCBI-GeneID:
103087990
NCBI-ProteinID:
XP_007470029
UniProt:
A0A340YDJ2
LinkDB
All DBs
Position
Unknown
AA seq
1634 aa
AA seq
DB search
MRLAAGHFQKGSSEHCSIRVAPHRRHAGRRVTWSPGGQGPERTPRTPAPRPNNSRRPDGL
SWSCFADKAPPLGRPHTGGWGPTEEEEDGPGRRARPQSPLLAGQATSEGLGAGRVRLRTP
SRPAPSSARGDRSAARPSGSGTPKSTNGAAALPARPAGRPCGPLPTAASLLPRGDRQPRS
VPLRPLLVACPSPLCPPLRPSLPPVTSRCVPRSVPARRPPAMLRGATWALLLAAALGLGA
RGVRGAVALADFYPFGAERGDAVTPKQDDGGSGLRPLSVLFPFFGAEHSGLYVNNNGIVS
FLKEVSQFTPVAFPIAKDRCVVAAFWADVDNRRAGDVYYREATDAATLRRATDDVRRHFP
ELPGFSATWVFVATWYRVTFFGGSSSSPVNTFQTVLITDGKLSFTIFNYESITWTTGTHA
SSGGDAAGLGGIAAQAGFNAGDGRRYFSIPGSRTADMAEVETTTNVGVPGRWAFRIDDAQ
VRVGGCGHTTSVCLTLRPCLNGGKCIDDCVTGNPSYTCSCLSGFTGRRCHLDVNECASHP
CQNGGTCTHGVNSFMCQCPAGFGGPTCETAQSPCDAKECENGGWCQVEGGSAVCVCAAGY
TGAACETDVDECGSDPCLNGGSCVDLLGNFTCLCSEPFEGPRCETGSHPMPDACLSAPCQ
NGGTCVDADQGYVCECPEGFMGLDCRERTPSNCECRNGGRCLGANTTLCQCPLGFFGLLC
EFEVTAMPCNVNTQCPDGGHCMEYGGSYLCVCHTDHNVSHSLPSPCDSDPCFNGGSCDAH
DDSYTCQCPRGFHGRHCEKARPRLCSSGPCRNGGTCKEAGGEYRCDCPYRFTGRHCEIGK
PDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPSPCFRSPCMNGGTCEALGTDF
SCHCQAGYTGRRCQAEVDCGPPEEVTHATLQFNGTRLGAVALYSCDRGYSPSTSSHIRVC
QPQGVWSEPPQCHEIDECRSQPCLHGGSCQDRVAGYLCVCSPGHEGARCELETDECLTQP
CRNGGSCRDLPGAFVCQCPPGFVGVHCETEADACASRPCQHGGRCENGGGAYLCVCPEGF
LGYHCETVSDPCFSSPCGGRGYCLASNGSHSCTCKAGYTGKDCAKELFPPTALKVERVEE
SGVSISWRPPGGPAARHMLDGYAVTYASSDGSYRRTDFVDRGRSSHQLRALAAGRAYNIS
VFSVKRNANNKNDISRPVVLLTRTRPRPVEGLEVTNVTASAISVRWALHRIRHATVSSVR
VSIRHPKAQEDESTDVDKGVDKFTFRTLLPGRRYTIWVTALSGPGGQEHPTESLASAPLH
VWTRPLPPANLTAARVTATSAHVVWDAPTPGTSLEAYVINVTTSQSTKSRYVPNGRLVSY
TVRDLMPGRRYQLSVTAVQSAGGDQLHSEPAHLYIITSARDGADRRWHREGLPPRALRTR
PAPARLPELRLLNDPGAPAPPTQAPRFSELVDGRARVSASFRSSPGRRVTVRSQPTALVQ
LENTEEVPEQVSLALQLPGRSGDKGVENAPGNCSDNPCQNGGTCVPGEDAHSCDCTPGFK
GRHCELACRKVPQPCTRLFSETKPFPVWEGGVCHHVYKRVYKVHPDTCFKESCESTRART
PDRKQSNSPTLKKS
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggccgctggccacttccagaagggttcatccgagcactgctccatcagggtg
gccccccaccgacgacacgccggcaggagggtgacctggtcccctgggggacaggggccc
gaaaggacacccaggacgcctgcccccaggcccaacaactcacgcaggcctgacggtctg
tcctggagctgctttgcggacaaggcacctcctctgggccggccccacacgggcggctgg
ggacccacggaggaggaggaggatggccctggccgcagggcacgcccgcaaagccctctc
cttgccggccaggccacctccgaggggctcggggccgggcgggtccggctccgaacgccg
tcccgcccggcgccttcctccgcgagaggcgaccggagcgcggcccggccgagcggcagc
gggactccaaagtccaccaacggcgcggccgcgctccccgcacgcccggccggccggccc
tgcgggccactcccgaccgcggcctcgctcctgccccgcggtgaccgccagccccgctcc
gtccccctgcggcccctcctcgtcgcctgtccgtccccgctgtgtcccccgctccgtcct
tctctgccccccgtaacgtcccgctgtgtccctcgctccgtccccgcccgccgaccgccg
gcgatgctgcgcggcgccacctgggcgctgctcttggccgcggccctggggctcggggcg
cgcggcgtgcgcggcgcggtggccctcgccgacttctacccgttcggcgcggagcgcggc
gacgccgtcacccccaagcaggacgacggcggctccgggctgcggccgctctccgtgctc
tttccgttcttcggcgccgagcactccggcctctacgtgaacaacaacgggatcgtctcc
ttcctgaaggaggtttctcagttcaccccggtggccttccccatcgccaaggaccgctgc
gtggtggcagccttctgggcggacgtggacaaccggcgtgcaggcgacgtgtactaccgg
gaggccaccgacgcagccacgctgcgcagggccacagacgatgtcaggcgccacttcccc
gagctcccaggcttctccgccacctgggtgttcgtagccacctggtaccgcgtcaccttc
tttggaggcagctcctcctcccccgtcaacacgttccagaccgtgctcatcaccgacggc
aagctctccttcaccatcttcaactacgagtccatcacatggaccacgggcacgcacgcc
agcagcgggggcgatgccgctggtctggggggcatcgcggcccaggccggcttcaatgcg
ggcgatgggcggcgttacttcagcatccccggctcacgcacagcggacatggcggaggtg
gagaccaccaccaacgtgggcgtgcccgggcgctgggcgttcagaatcgatgatgcccag
gtgcgcgtggggggctgcggccatacaacctccgtgtgcctgaccctgcgcccctgcctc
aacggcggcaagtgcatcgacgactgcgtcacgggcaacccctcctacacctgctcctgc
ctctcaggcttcacggggaggaggtgccacctggatgtgaacgagtgtgcttcccacccg
tgtcagaacggcgggacctgcacgcacggcgtcaacagcttcatgtgccagtgcccggcc
ggcttcgggggacccacctgtgagacagcacagtctccatgcgatgccaaagagtgtgag
aacggcggctggtgccaggtggagggcggctctgcggtgtgcgtgtgcgcagccggctac
acgggtgcagcctgcgagacggatgtggacgagtgcggctctgacccctgcctgaacgga
gggtcgtgtgtcgacctgctggggaatttcacctgcctttgttcagagcccttcgaggga
cctcgctgcgagacaggaagccacccgatgcccgacgcctgcctctcggccccctgccag
aacgggggcacctgtgtggatgcggaccagggctacgtgtgtgaatgccccgaaggcttc
atgggccttgactgcagggagagaacccccagcaactgtgagtgccgcaatggtggcagg
tgcctgggggctaacaccaccctctgccagtgccctctgggcttctttgggctcctctgc
gaatttgaggtcacggccatgccctgcaacgtgaacacacaatgccccgacggcggccac
tgcatggagtacggcgggagctacctgtgcgtctgccacaccgaccacaacgtcagccac
tcgctgccgtccccctgcgactcggacccctgcttcaacggaggctcctgtgatgcccac
gatgactcctacacgtgccagtgcccgcggggcttccacggccggcactgcgagaaagcc
cggccgcgcctgtgcagctcggggccctgcaggaacggcggcacgtgcaaggaagcgggc
ggcgagtaccgctgcgactgcccctaccgtttcaccggaaggcactgcgagatcgggaag
ccagactcgtgcgcctctggcccctgtcacaacggcggcacctgcttccactacatcggc
aaatacaagtgtgactgtcccccaggcttctcgggacggcactgcgagatagccccctcc
ccctgcttccggagcccgtgcatgaatgggggtacctgcgaggccctggggacagacttc
tcctgccactgtcaagcagggtacacaggacgccggtgccaggcagaggtggactgcggc
ccgcccgaggaggtgacacacgccaccctgcagttcaacggcacccggctgggcgcggtg
gccctctactcgtgtgaccgaggctacagcccgagcacctccagccacatccgcgtctgc
cagccacagggcgtctggagcgagcctccccaatgccacgaaattgacgagtgccgatcc
cagccatgcctgcatgggggctcctgccaggaccgcgtcgctgggtacctgtgtgtctgc
agcccagggcatgaaggagcccgctgcgagctggagacagacgagtgcctgacgcagccc
tgcagaaacggaggctcctgcagggacctcccgggggcctttgtctgccagtgcccccca
ggcttcgttggagtccactgcgagacagaggcggacgcctgcgcctccaggccctgccag
cacggaggccggtgcgagaacggtggcggggcctacctgtgtgtctgcccagagggcttc
ctcggctaccactgcgagacagtgagcgacccctgcttctccagcccctgtgggggtcgc
ggctactgcctggccagcaacgggtcccacagctgcacctgtaaagcgggctacactggc
aaggactgtgccaaagagctcttcccaccaacggccctcaaggtggagcgagtggaagag
agcggggtctccatctcctggcgcccacccggaggcccagccgcccggcacatgctcgac
ggctacgcggtcacctacgcctcttccgacggctcctaccgccgcacggacttcgtggac
cggggccgctcctcgcaccagctccgggccctggcggccggcagggcttacaacatctcc
gtcttctcggtcaagcgtaatgccaacaacaagaacgacatcagcaggcccgtggtgctt
ctcacccgcacgcgaccccgccccgtcgagggcctcgaggtcaccaacgtgactgccagc
gccatctcggtgcgatgggctctgcacaggatccgccatgccaccgtcagcagcgtccgc
gtgtccatccgccaccccaaggcgcaggaggacgagtccaccgacgtggataagggtgtg
gacaagttcacattcaggaccctgcttccaggaaggagatacaccatctgggtgactgcc
ctcagcgggcctggggggcaggagcaccccaccgagagcctggcctcggcaccgctgcac
gtgtggacccggcctctgccgccagccaacctgaccgccgcccgagtcacggccacctct
gcccacgtagtctgggatgcccccactccaggcacctcactggaggcctatgtcatcaac
gtgaccactagccagagcaccaagagccgctacgtccccaacgggaggctggtgtcctac
acagtgcgggacctgatgcctggacggcggtaccagctgtcagtgacggcagtgcagagc
gccgggggcgaccagctgcacagcgagcctgctcacctgtacatcatcacctccgcaagg
gacggcgccgacagacgctggcaccgggaaggactccccccgcgggcgctcagaacccga
ccggcccccgcgcgcctgccggagctgcgtctgctcaacgaccccggcgcccctgcaccg
ccgacccaggcccccaggttctcggagctcgtggacggcagagcacgagtgagcgccagc
ttccgcagctcgcctggcagacgggtcaccgtgagatcacaacccacggctctggtgcag
ctggagaacacggaggaggtccccgagcaggtcagcctggccctccagctccctggacgc
agtggtgacaaaggcgtggaaaatgcccctgggaactgctcagacaacccctgtcagaat
ggaggcacctgtgtgcctggtgaggatgcccacagctgtgactgcaccccagggttcaaa
ggcagacactgcgagcttgcctgcagaaaggtgccccagccctgcacacggctgttctcg
gagacaaagccctttccggtctgggaaggaggcgtctgtcaccacgtgtataaaagagtc
tacaaagtgcatccggacacctgtttcaaagagagctgtgagagcacacgcgccaggacc
ccagacaggaaacaaagtaacagtcctacactgaagaaatcttaa
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