Lipotes vexillifer (Yangtze River dolphin): 103088026
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Entry
103088026 CDS
T03090
Symbol
CAPN3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103088026 (CAPN3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lve01002
]
103088026 (CAPN3)
Enzymes [BR:
lve01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
103088026 (CAPN3)
Peptidases and inhibitors [BR:
lve01002
]
Cysteine peptidases
Family C2: calpain family
103088026 (CAPN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
103088026
NCBI-ProteinID:
XP_007460193
UniProt:
A0A340XFJ5
LinkDB
All DBs
Position
Unknown
AA seq
822 aa
AA seq
DB search
MLTVISASVAPRTGAEPRSPGPIPQAAQGKGTEASGRNPSGIYSAIISRNFPVIGVKEKT
FEQLHKKCLEKKVLYVDPEFPPDETSLFYSQKFPIQFIWKRPPEICENPRFIIGGANRTD
ICQGDLGDCWFLAAIACLTLNKRLLFRVIPHDQSFTENYAGIFHFQFWRYGDWVDVVIDD
CLPTYNNELVFTKSNHHNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFE
IKDAPRDMYKIMKKAIERGSLMGCSIDDGTNMTYGTSPSGLNMRDLIERMVRNMNNSHLR
DSDLIPEGCSDDRPTRTIVPVQYETRMACGLVKGHAYSVTGLEEALYKGEKVKLVRLRNP
WGQVEWNGSWSDSWKDWSFVDKNEKARLQHQVTEDGEFWMSYDDFIYHFTKLEICNLTAD
ALESDKLQAWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEEDDDPDESEVICS
FLVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMHGNKQHLQKDFFLYNASKARSKTYIN
MREVSERFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEVENTISVDRPVKKKKT
KPIIFVSDRANSNKELGVDQESEEGKDKTSPDKQAKSPQSEPGSADQESEEQQQFGNIFR
QIAGDDMEICADELKNILNRVVNKHKDLKTQGFTLESCRSMIALMDTDGSGRLNLQEFHH
LWKKIKAWQKIFKHYDTDQSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYADRSMNIDF
DSFICCLLRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYA
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgtcattagcgcgtctgtggccccacggacaggggctgagcccaggtctccg
gggccaatcccccaggcagcccagggcaagggcaccgaggccagcggcagaaacccaagt
ggcatctactcagccatcatcagccgcaattttcccgttattggggtgaaagagaagaca
tttgagcagcttcacaagaaatgtctagaaaagaaggttctttatgtggatcctgagttc
ccaccggatgagacctctctcttttatagccagaagttccccatccagttcatctggaag
agacctccggaaatttgtgagaatccccgatttatcatcggcggagccaacagaactgac
atctgtcaaggagatctaggggactgctggtttctcgcagccatcgcttgcctgaccctg
aacaagcgactgcttttccgggtcataccccatgatcagagtttcaccgaaaactacgcg
gggatctttcacttccagttctggcgctatggagactgggtggacgtggttattgatgac
tgcctgccaacttacaacaatgaactggttttcaccaaatccaaccaccacaatgagttc
tggagcgctctgctggagaaggcttatgctaagctccatggttcatatgaagccctgaaa
ggtgggaacactacagaggccatggaggacttcacaggaggagtaacagagttttttgaa
atcaaggatgctcccagagacatgtacaagatcatgaagaaagccatcgagaggggctcc
ctcatgggttgctccattgatgatggcacaaacatgacctatggaacctctccttctggt
ctgaacatgagggacttgattgagcggatggtgaggaatatgaataactcacatctcagg
gattcagacctcatccctgagggatgctcagacgacagaccaacccggacgattgttcca
gttcagtacgagacaagaatggcctgcgggctggtcaaaggccacgcctactcagtcact
gggctggaggaggccctgtacaagggtgagaaagtgaagctggtgcggctgcggaacccc
tggggccaggtggagtggaatggctcctggagtgacagttggaaggactggagctttgtg
gacaagaacgagaaggcccgtctgcaacaccaggtcacggaggatggagagttctggatg
tcctatgacgatttcatctaccatttcacaaagctggagatctgcaacctcacagctgat
gccctggagtccgacaagcttcaggcttggacagtgtccgtgaacgagggccgctgggtg
aggggctgctctgctggaggctgccgcaacttcccagacactttctggaccaaccctcag
taccgtctgaagctcctggaggaggatgacgaccctgacgagtccgaggtgatctgcagc
ttcctggtggccctgatgcagaagaaccggcggaaggaccggaagctgggggccaacctc
ttcaccatcggctttgccatctacgaggttcccaaagagatgcacgggaacaagcagcac
ctgcagaaggacttcttcctgtacaacgcctccaaggccaggagcaaaacctacatcaac
atgcgggaggtgtctgagcgcttccgcctgcctcccagcgagtacgtcattgtgccctcc
acctacgagccccaccaggagggggaattcatcctccgggtcttctctgaaaagaggaac
ctctctgaggaagttgagaatacaatctccgtggatcggccagtgaagaagaaaaaaacc
aagcctatcatcttcgtttcagacagagcaaacagcaacaaggagctgggtgtggaccag
gaatcagaggagggcaaagacaaaacaagccctgataagcaagcaaaatccccacagtca
gagcccggcagcgctgaccaggaaagtgaggaacagcagcaattcgggaacattttcagg
cagatagcaggcgatgacatggagatctgtgcagatgagctcaagaatatccttaacaga
gttgtgaacaaacataaggatctgaagacacaaggcttcacgctggagtcctgccgtagc
atgattgctctcatggacacagacggctctgggagactgaacctgcaagagttccatcac
ctctggaagaagattaaggcctggcagaaaattttcaagcactatgatacagaccaatcc
ggcaccatcaacagctacgagatgcgaaatgcagtcaatgacgcaggcttccacctcaac
agccagctctacgacatcatcaccatgcgctacgcagacaggtccatgaacatcgacttc
gacagcttcatctgctgcctcctcaggctggagggcatgttcagagcttttaatgcattt
gacaaggatggtgacggtatcatcaaactcaacgttctagagtggctgcagctcaccatg
tatgcctga
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