Lipotes vexillifer (Yangtze River dolphin): 103088040
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Entry
103088040 CDS
T03090
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03420
Nucleotide excision repair
lve04120
Ubiquitin mediated proteolysis
lve05161
Hepatitis B
lve05170
Human immunodeficiency virus 1 infection
lve05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103088040 (DDB1)
09124 Replication and repair
03420 Nucleotide excision repair
103088040 (DDB1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
103088040 (DDB1)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
103088040 (DDB1)
05161 Hepatitis B
103088040 (DDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lve04121
]
103088040 (DDB1)
03400 DNA repair and recombination proteins [BR:
lve03400
]
103088040 (DDB1)
Ubiquitin system [BR:
lve04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
103088040 (DDB1)
DNA repair and recombination proteins [BR:
lve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103088040 (DDB1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
103088040 (DDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RIG_2nd
Beta_propel
Motif
Other DBs
NCBI-GeneID:
103088040
NCBI-ProteinID:
XP_007462246
UniProt:
A0A340XLI0
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGI
IGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICF
VYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYH
NGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRE
TDDTLVLSFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVS
QDPKALVSEWKEPQGKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVAC
LDITPLGDSSGMSPLCAIGLWTDISARIAKLPSFELLHKEMLGGEIIPRSILMTTFESSH
YLLCALGDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHET
SFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCRLGKDPSTYFIVGTAMVYPEE
AEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGET
STPTQGSVLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTER
KTEPATGFIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaactacgtggtaacggcacagaagcccaccgccgtgaacggctgcgtgacg
ggacactttacttcagctgaagacttgaacctgttgattgccaaaaatacgagattagag
atctatgtcgtcactgctgaggggcttcggcctgtcaaagaggtgggcatgtatgggaag
attgctgtcatggagcttttcaggcccaagggggagagcaaggacctactgtttatcctg
acagctaagtacaatgcctgcatcttggagtataagcagagtggcgagagcattgacatc
ataacgcgagctcatggcaatgtccaggaccgaattggccgcccctcagagacgggcatt
attggcatcattgaccctgagtgccgaatgattggcctgcgactctatgatggccttttc
aaggttattccactagaccgggacaataaagagctcaaggcctttaacatccgcctggag
gagttgcatgttattgatgtcaagttcctatatggttgccaagcacctaccatctgcttt
gtctaccaggaccctcaggggcggcacgtaaaaacctatgaggtgtctctccgagagaag
gagttcaataagggcccttggaaacaggaaaacgtagaagctgaagcttccatggtgatt
gcagtcccagagccttttggaggcgccatcatcattggacaggaatcaatcacctatcat
aacggtgacaaatatctggcgattgcccctcccatcattaagcaaagcacaattgtgtgt
cacaatcgcgtggaccccaatggctcccgctatctgctgggagacatggaaggacggctc
ttcatgctgcttttggagaaggaggagcagatggatggcaccgtcaccctcaaggatcta
cgagtggagctccttggggagacctctattgctgagtgcttgacataccttgataatggt
gttgtgtttgtcgggtctcgccttggtgactcccagcttgtgaagctcaatgttgacagc
aatgaacaaggctcctatgtagtggccatggaaacctttaccaatttaggacccattgtg
gacatgtgtgtggtggacctggagaggcaggggcagggacagctggtcacttgctctggg
gctttcaaggaaggctctttgcggatcatccggaatggaattggaatccacgagcatgcc
agcattgacttgccaggcatcaaaggcttatggcccctgcggtctgatcctaatcgggag
actgatgacactttggtgctctcttttgtgggccagacaagagttctcatgttaaacgga
gaggaagtggaagaaactgaactgatgggttttgtggacgatcagcagactttcttctgt
ggcaacgtggctcatcaacagctcatccagatcacttcagcatctgtgaggttggtctct
caagaccccaaagctctcgtcagtgagtggaaggagcctcagggcaagaacatcagtgtg
gcctcctgcaatagcagccaggtagtggtagccgtgggaagggccctctactacctgcag
attcatcctcaggagctccgacagatcagccacacagagatggaacacgaagtggcctgc
ttggacatcacccctttaggggacagcagtggaatgtcccctctttgtgctattggtctc
tggacagacatctcagcccgaatcgcgaagctgccctcttttgagctactgcacaaagag
atgctgggtggagagatcattcctcgttctatcctgatgaccacctttgagagtagccac
tacctcctttgtgccttgggagatggggcacttttctactttgggctcaacattgagaca
ggcctgttgagcgaccgtaagaaggtgactctgggcacccagcccactgtattgaggact
ttccgttctctttctaccaccaacgtctttgcttgctctgaccgccccactgtcatctac
agcagcaaccacaaattggtcttctccaatgtcaacctcaaggaggtgaactacatgtgt
cccctcaactcagatggctatcctgacagcctggcactggccaacaacagcaccctcacc
attggcaccattgacgagatacagaagctgcacattcgtacagttcccctctatgaatct
cccaggaagatctgctaccaggaggtgtcccagtgcttcggggtcctctccagccgtatt
gaagtccaggacacgagtgggggcacaactgctctgaggcccagcgccagcacccaggcc
ctgtccagcagcgtcagctccagcaagctgttctccagcagcacagcccctcacgagacc
tcctttggagaagaggtggaggtgcataacctccttatcattgaccagcacacctttgaa
gtgctccacgcccaccagttcctgcagaacgagtatgccctcagcctggtctcctgcagg
ctgggcaaagaccccagcacgtacttcatcgtgggcacggccatggtgtaccctgaggag
gcggagcccaagcagggtcgtattgtggtctttcagtattcagatggaaaactacagact
gtggctgaaaaggaggtgaaaggggctgtgtactctatggtggaatttaacgggaagttg
ttagccagcatcaacagcacggtgcggctttatgagtggacgacggagaaggagctccgc
accgagtgcaaccactacaacaacatcatggccctgtacctgaagaccaagggcgacttc
atcctggtgggcgacctgatgcgctcggtgctgctgctggcctacaagcccatggagggc
aacttcgaagagattgctcgagactttaaccccaactggatgagtgctgtggaaatcttg
gatgacgacaatttcctgggggctgaaaatgcctttaacttgtttgtgtgtcagaaggat
agcgctgccaccactgacgaggagcggcagcacctccaggaggttgggctcttccactta
ggcgagtttgtcaacgtcttttgccacggctctctggtcatgcagaatctgggcgagacc
tccacccctacccagggctcggtgctcttcggcacggtcaacggcatgattggcctggtg
acctcactgtcagagagctggtacaacctcttgttggacatgcagaatcgactcaataaa
gtcatcaaaagtgtgggcaagattgaacactccttctggagatcctttcatactgaacgg
aagacagaaccagccacaggcttcatcgatggggacttgattgagagtttcctggacatc
agccggcccaagatgcaggaggttgtggcaaacctgcagtatgacgatggcagtggaatg
aagcgagaagccactgcggacgacctgatcaaggttgtggaggagttaactcggatccac
tag
DBGET
integrated database retrieval system
