KEGG   Lipotes vexillifer (Yangtze River dolphin): 103088133
Entry
103088133         CDS       T03090                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:lve00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lve01009]
    103088133 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lve04121]
    103088133 (TRIM42)
Protein phosphatases and associated proteins [BR:lve01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103088133 (TRIM42)
Ubiquitin system [BR:lve04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    103088133 (TRIM42)
SSDB
Motif
Pfam: zf-B_box fn3 Ig_DSCAM-DSCAML_C Pur_ac_phosph_N
Other DBs
NCBI-GeneID: 103088133
NCBI-ProteinID: XP_007447034
UniProt: A0A340WIU4
LinkDB
Position
Unknown
AA seq 723 aa
METAMCVCSPCCTWHRCPRLCSCLCCKFLFTSERNCTCFPCPYKDERDCQCCHCTCSESP
NCHFCCCSWANDPDCKCCCTASSNLKCHYYESRCCRNVTITFRRSRLQSIRNFSKTALRI
GISDAQLDKVKMMPAKSNLVSHLSCPICSRLRLHSFILPCHHSLCEKCLRQLQKHAEVTE
NFFILICPVCNRSHCMPYSHKMLLPENYLRGRLTKRYMQQHGYLRWRFDRSSGPIVCQVC
RNRRIAYKRCITCRLNLCNECLKTFHSDVTMQDHVFVDTSTEDQDEKICIHHPSSRIIEY
CRNDDELLCSFCKTALHNGHDTISLMDACSERAAALFSAIAKFKAVRYEIDNDLMEFNIL
KNSFKADKEVKRKEIRNGFLKLRSILQEKEKTIMEQIENLEVSRQKEIEKYVYVTTMKVN
EMGGLIAYSKEALKETGQVAFLQSAKILVDQIEDGIQSTYRPDPQLRLHSLNCMPLDFAE
LSNAIHELFPTGPKKVCSSGNSLPSPYPLHSEMMITRKVTFSTHSFGNQQIYQRSSSLLS
FNAPSCEKTKMGLEAYGRAQSAEPAKPTDSLYTYWSAGVENQPVQNSSSFHNWYSFNDSS
LKTPGPILIYQTLVYPRAAKVYWTCPIEDVDSFEMEFYELISSPPNNVQIELCGQIRDIM
QQNLELHNLTPNTEYLLKVRAINENGPGQWSDICKVVTPDGRGKNRAKWNLLKNIQTALQ
KRF
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggagactgccatgtgtgtttgctctccatgttgtacatggcacaggtgtccccgctta
tgctcctgtctgtgctgcaagttcctcttcacctcggagcggaactgcacctgctttccc
tgcccttacaaggatgagcgcgactgccaatgctgccactgcacctgctccgagagcccc
aactgccacttctgctgctgctcctgggccaatgaccctgactgtaagtgctgctgtaca
gccagcagcaacctcaagtgccactactacgagagccgctgctgccgcaatgtcaccatc
acgttccgcaggagccgcctccagagcatccgtaacttctccaagacggccctgcgcatc
gggatcagcgacgcgcagctggataaggtgaagatgatgcccgcgaaaagcaacctggtc
agccacctgtcgtgccccatctgcagccggctgcgcctgcactccttcattctaccctgc
caccacagcctgtgcgagaagtgcctgcggcagctgcagaaacacgccgaggtcaccgag
aatttcttcatcctcatctgccccgtgtgcaaccgctcgcactgcatgccctacagccac
aagatgctgctgcccgagaactacctgcgcggacgcctcaccaagcgctacatgcagcag
catggctacctcaggtggcgcttcgaccgctccagcgggcctatcgtctgccaggtctgc
cgcaaccgccgcatcgcctacaagcgctgcatcacctgccgcctcaacctgtgcaacgag
tgcctcaagaccttccactcggacgtgaccatgcaggaccacgtgttcgtggacaccagc
accgaggaccaggacgagaagatctgcatccaccacccgtccagccgcatcattgagtac
tgccggaacgacgacgagttgctctgcagcttctgcaagactgccttacacaatggccac
gacaccatcagcctcatggatgcctgctccgagagggctgccgcgctcttcagcgccatc
gccaagttcaaagcagtccgatatgaaattgataatgacctcatggaattcaacatttta
aaaaacagctttaaagctgacaaggaggtaaagcgaaaagagatcagaaatggattcctc
aagctgcgcagcattctccaggagaaagagaaaaccatcatggagcagatagagaatctg
gaagtgtccaggcagaaggagattgaaaaatatgtgtacgtcaccaccatgaaagtgaac
gaaatgggtggcctgatcgcctactccaaggaagcactgaaggagacaggccaagtggcg
ttcctgcagtcggccaagattctggtggaccagatcgaggacggcatccagagcacctac
aggccagacccacagctccggctacactccttgaactgcatgcccttggactttgctgag
ctctccaatgccatccacgaactcttccccacagggcccaagaaggtgtgctcctcaggg
aactccctgccatcaccctatcccctgcactcagaaatgatgattaccaggaaggtcact
ttcagcacccacagcttcggcaaccagcagatataccagcgaagctcctccttattgtcc
tttaatgcccccagctgtgagaagaccaaaatgggtctggaggcctatgggcgagcccag
tcagctgaacctgccaagcccacagacagcctctacacttactggagtgcaggggtagaa
aaccagcctgtgcagaacagcagcagcttccacaactggtactcgttcaatgatagctcc
ctgaagactccaggcccaattcttatctaccagactctggtgtatccgagagctgccaag
gtttactggacatgcccaatagaagacgtggactcttttgagatggaattctatgaactc
attagttcccctcctaacaatgtgcagatagagctctgtggacaaattcgggatataatg
cagcagaacctggagctgcacaacctgacccccaacaccgagtatctgcttaaagtgaga
gccatcaacgagaacggtcctgggcagtggagtgatatctgcaaggtggtaacaccggat
gggcgtgggaagaaccgagctaagtggaacctgctgaagaatatccagactgccctccag
aaacgcttctga

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