Lipotes vexillifer (Yangtze River dolphin): 103088608
Help
Entry
103088608 CDS
T03090
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
103088608 (SCN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lve04040
]
103088608 (SCN2A)
Ion channels [BR:
lve04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
103088608 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
IQCJ-SCHIP1
HB_ELP1
Motif
Other DBs
NCBI-GeneID:
103088608
NCBI-ProteinID:
XP_007450120
UniProt:
A0A340WT28
LinkDB
All DBs
Position
Unknown
AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATPALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFEINITSFFNNSL
DGNGTTFNRTVSMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKEDGVHKSESEDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRAKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRPSNVSQASRASRVLPVLPMNGKMHSAVDCNGVVSLVGGP
SALTSPAGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPTAKQRATSMASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHLVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGLIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDYVKR
KIREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEVEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQVYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECKALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSCIYKKDKGKEGDGTPIKEDILTDKLNENSTPEKTDVTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccgccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgagcaacgcattgcagaagagaaagctaagagacccaaacaagaa
cgcaaggatgaagatgatgaaaatggcccaaagccaaatagtgacttggaagcaggaaaa
tcccttccatttatttatggagacattcctccagagatggtgtcagagcccctggaggac
ctggacccctactatatcaataagaaaacgtttatagtattgaataaagggaaagcaatc
tctcgattcagtgccacccctgccctgtacattttaactcccttcaaccctattagaaaa
ttagctattaagattttggtacattctttattcaatgtgctcattatgtgcactattctt
accaactgtgtatttatgaccatgagtaatcctccagactggacaaagaatgtggagtac
acctttacaggaatttacacttttgaatcacttataaaaatacttgcaaggggcttttgt
ttagaagatttcacatttctacgggatccgtggaattggttggatttcacagtcattact
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagcactgaaaacaatttcagtcattccaggcctgaagaccatcgtgggcgcc
ttaatccagtcagtgaagaagctctcagatgtaatgatcctgactgtgttttgtctgagc
gtgtttgcactaataggattacagctgttcatgggcaacctgcgaaacaaatgtttgcaa
tggcccccagataattcttcctttgaaataaacatcacttccttctttaataactcattg
gatgggaatggtaccactttcaataggacagtgagcatgtttaactgggatgaatatatt
gaagataaaagtcacttctattttttggaagggcaaaatgatgctctgctttgtggcaac
agctcagatgcaggccagtgtccagaaggatacatctgtgtgaaggctggtagaaacccc
aactatggctacacaagcttcgacacctttagctgggctttcttgtccttatttcgtctt
atgactcaagacttctgggaaaacctttatcaactgacattacgtgctgctgggaaaaca
tacatgatattttttgtgctagtcattttcttgggctcattctaccttataaatttaatc
ctggctgtggtggccatggcctatgaggaacagaatcaggcaacgctggaagaggctgaa
cagaaagaagctgaatttcagcagatgcttgaacaattaaaaaagcaacaagaagaagct
caggcagcagctgcagcagcatctgctgaatcaagagacttcagtggtgctggtgggata
ggggttttctcagaaagttcttcagtagcatcaaagttgagctccaagagtgaaaaagag
ctgaaaaacaggcggaagaaaaagaaacagaaagaacagtctggagaagaagagaaggaa
gatggggtccacaaatctgaatctgaagacagcataagaagaaaaggtttccgtttttcc
ttagaaggaagcaggctgacatatgaaaagaggttttcctctccacaccagtctttattg
agcatccgtggctcccttttctctccaagacgcaacagtagggcgagccttttcagcttc
agaggtcgagccaaggatattggctccgagaatgactttgccgatgacgagcacagcacc
ttcgaagacaatgacagcagaagagactctctgtttgtgccgcacagacacggggagcgg
cgccccagcaacgtcagccaggccagccgcgcctccagggtgctccctgttctgcccatg
aacgggaagatgcacagtgctgtggattgcaacggcgtggtctccctggttgggggccct
tctgccctcacatctcccgccggacagctcctgccagagggcacgactactgaaacggaa
ataagaaagagacggtccagttcttatcatgtttccatggatctgttggaagatcctaca
gcaaagcaaagagcaacgagtatggctagtattttgaccaacaccatggaagaacttgaa
gaatccagacagaaatgcccaccctgctggtataagtttgctaacatgtgtttgatttgg
gactgctgtaagccatggttaaaggtgaaacatctcgtcaacttggttgtgatggaccct
tttgttgacctggccatcaccatttgcattgtcttaaataccctcttcatggccatggag
cactatcccatgacggagcagtttagcagtgtgctgtcagttgggaacctggtcttcact
gggattttcacagcagaaatgtttctaaagataattgccatggatccatattattacttt
caagaaggctggaatatttttgatggtttaattgtgagccttagtttaatggaacttggt
ttggcaaacgtggaaggattgtcagttctccgatcatttcgactgctcagagttttcaaa
ttggcaaaatcttggccaactctgaacatgctgataaagatcattggcaattccgtgggg
gctctgggtaacctcaccttggtgttggccatcattgtcttcatttttgccgtggtcggc
atgcagctctttggtaagagctacaaagaatgtgtctgcaagatttccaatgattgtgaa
ctcccgcgctggcacatgcatgacttcttccactccttcctgattgtgttccgagtgctg
tgtggagagtggatagagaccatgtgggactgcatggaggtcgccggtcaaaccatgtgc
cttactgtcttcatgatggtcatggtcattggaaacctggtggttctgaacctcttcctg
gccttactcttgagttcattcagttctgacaatcttgccgccactgatgatgataatgaa
atgaataatctccagattgctgtgggaaggatgcagaaaggaattgattatgttaaaaga
aaaatacgtgaatttattcagaaagcctttgttagaaagcagaaagctttagatgaaatt
aaacctcttgaagatctaaataacaaaaaagacagctgtatttccaaccataccaccata
gaaataggcaaagacctcaattatctcaaagatggaaatggaactaccagtggcataggc
agcagtgtagaaaaatatgttgtggatgaaagtgattacatgtcctttataaacaacccc
agcctcactgtgactgtaccaattgctgtcggagaatctgactttgaaaatctaaatact
gaagaattcagcagcgagtcagatatggaggaaagcaaagagaagctaaatgcaactagt
tcatctgaaggcagcactgttgacataggagctcccgctgagggagaacaacccgaggtt
gaacctgaagaatctctggaacctgaagcctgttttacggaagactgtgtgcggaagttt
aagtgttgtcagataagcatagaagaaggcaaagggaaactctggtggaacttgagaaaa
acttgctataagatagtggagcataactggtttgaaaccttcattgtcttcatgattcta
ctcagcagtggggcactggcctttgaagatatatatattgaacagcgaaaaaccattaag
accatgttagaatatgctgacaaagttttcacttatatattcatcctggaaatgcttctc
aagtgggttgcatacggctttcaagtgtattttaccaatgcctggtgctggctagatttc
ctgattgtcgatgtctcattggttagcttaactgcaaatgctttgggttactcagaactt
ggtgccatcaaatccctcagaacactaagagctctgaggccattgagagccttatcccgg
tttgaaggaatgagggttgttgtcaatgctcttttaggagccattccatccataatgaat
gtacttctggtttgtctgatcttttggttaatattcagtatcatgggagtgaatctcttt
gctggcaagttttatcactgtattaactacaccactggagaaatgtttgatgtcagcgtg
gtcaacaactacagtgagtgtaaggccctcatagagagcaaccaaactgcccggtggaag
aacgtgaaagtcaattttgataatgtgggactcgggtatctttctctacttcaagtagcc
acatttaagggatggatggatatcatgtatgcagctgttgattcacgaaatgtagaatta
caacccaagtatgaagacaatctgtacatgtatctttattttgtcatctttattattttt
ggttcattctttactctgaatcttttcattggtgtcatcatagataacttcaaccaacag
aaaaagaagtttggaggtcaagacatttttatgacagaagaacagaagaaatactacaat
gcaatgaaaaaactgggttcaaagaaaccacaaaaacccatacctcgacctgctaacaaa
tttcaagggatggtctttgattttgtaaccaaacaagtctttgatatcagcatcatgatc
ctcatctgcctcaacatggtcaccatgatggtagaaactgatgaccagagtcaagaaatg
acaaacattctgtactggattaatctggtgtttattgttctgttcactggagaatgtgtg
ctgaaactaatctctcttcgttattactatttcaccatcggatggaatatttttgatttt
gtggtggtcattctctccattgtaggtatgtttctggctgagctgatagagaaatatttt
gtgtcccctaccctgttccgagtgatccgtcttgccaggattggccgaatcctgcgtctg
atcaaaggggccaaggggatccgcacgctgctctttgctttgatgatgtcccttcctgcg
ttgtttaacattggcctcctgctcttcctggtcatgttcatctatgccatctttgggatg
tccaacttcgcctatgttaagagagaagttggaattgatgacatgttcaacttcgagacc
tttggcaacagcatgatctgccttttccagattaccacctctgctggctgggatggattg
ctagcacctattcttaatagtggacctccagactgtgaccctgaaaaagatcaccctggc
agctcagttaagggagactgtgggaacccatctgtggggatcttcttttttgtcagttac
atcatcatatcatttctggtcgtggtgaacatgtacatcgctgtcatcctagagaacttc
agtgttgctactgaagaaagtgcagagcccctgagcgaggatgactttgagatgttctat
gaggtttgggagaagtttgatcctgacgccacccagttcatagagttctccaagctctct
gattttgcggctgccctggatcctcctcttctcatagcaaaaccaaacaaagtccagctc
attgccatggatctgcccatggtcagtggggaccggatccactgcctcgacattttattt
gcctttacaaagcgtgttttgggggagagtggagagatggatgcccttcgaatacagatg
gaagagagattcatggcatccaacccctccaaagtctcctatgagcccattacaaccact
ttgaaacgcaaacaagaagaggtgtctgctattgttatccagagggcttatagacgctac
ctcttgaagcaaaaagttaaaaaagtttcatgtatatataagaaggacaaaggtaaagaa
ggtgatggaacacccatcaaagaagatatcctcactgataaactaaatgagaattcaact
ccagagaaaaccgatgtgacaccttctaccacgtctccaccttcctatgacagtgtgacc
aaaccagaaaaagaaaaatttgaaaaagacaaatcagaaaaggaagacaaagggaaagat
atcagggaaagtaaaaagtaa
DBGET
integrated database retrieval system