Lipotes vexillifer (Yangtze River dolphin): 103088802
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Entry
103088802 CDS
T03090
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04151
PI3K-Akt signaling pathway
lve04510
Focal adhesion
lve04512
ECM-receptor interaction
lve05165
Human papillomavirus infection
lve05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103088802 (TNR)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103088802 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103088802 (TNR)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
103088802 (TNR)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103088802 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
lve00536
]
103088802 (TNR)
Glycosaminoglycan binding proteins [BR:
lve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103088802 (TNR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
EGF_2
FN3_Tor_3rd
Fn3_Dep-1_2nd
DUF4998
Motif
Other DBs
NCBI-GeneID:
103088802
NCBI-ProteinID:
XP_007451427
UniProt:
A0A340WV07
LinkDB
All DBs
Position
Unknown
AA seq
1358 aa
AA seq
DB search
MGADGETVVLKNMLIGVNLILLGSMLKPSECQLEVTTERVQRQAVEEEGGADSYNTSGKE
QPVVFNHVYNINVPLDSLCSSGLEALAEQEVSAEDEVLTEYTGQTSDHASQVTFTHRINL
PKKACPCASSAQVLQELLSRIEMLEREVSVLRDQCTSNCCQESAATGQLDYIPHCSGHGN
FSLESCGCICHQGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDCS
SRGLCVDGECVCEEAYTGEGCSELRCPGDCSGKGRCTNGTCLCQEGYAGEDCGQQRCLNA
CSGRGHCQEGICFCEEGYQGPDCSAVAPPEDLRVAGISDRSIELEWDGPMAVTEYVISYQ
PTALGGLQLQQRVPGDWSGVTISELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQG
LRFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
TVNVVALKEQARSPPTSASVSTVIDGPTHILVRDVSDTVAFVEWTPPRAKVDFILLKYGL
VGGEGGKTTFRLQPPLSQYSVQALRPGSQYEVWVSAVRGTNESESTTTQFTTEIDAPKNL
RLGSRTATSLDLEWDNSEAEVQEYKIVYSTLAGEQYHELLVPKSIGPTTRATLTDLVPGT
EYGIGISAIMNSQQSIPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITF
TPSSGIASEVTVPKDRTSYTLTDLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMMEVSLDATKRHAVLMGLQPATEY
IVNLVAVHGTVTSEPIMGSITTGIDPPKDITISNVTKDSVMVSWSPPVASFDYYRVSYRP
TQVGRLDSSVVPNTVTEFTISKLHPATEYEISLSSVRGREESERICTLVHTAMDNPVDLT
ATNITPTEALLQWKAPVSEVENYVIVLTHFAVAGETILVDGDSEEFQLVDLLPRTHYTVT
MYAASGPLTSGTISTNFSTLLDAPANLTASEVTRQSALISWQPPRAETENYILTYKSTDG
SRKELIVDAEDTWIRLEGLSESTDYTVLLQAAQDTERSSITSTAFTTGGRVFPHPQDCAQ
HLMNGDTLSGVYTIFLNGELSRKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWAEYRVG
FGNLEDEFWLGLDDIHGITSQGRYELRVDMRDGQDAAFAYYDKFSVEGSRSLYRLRIGGY
NGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYSHRLMAGRKRRSLQF
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgggggcagacggggaaacagtggtcttgaagaacatgctcattggtgtcaacctgatc
cttctgggctccatgctcaagccctcggagtgtcagctggaggtcaccacggaaagggtc
cagagacaggcggtggaggaggaaggaggcgctgacagctacaatacatccggcaaagag
cagccggtggtcttcaaccacgtgtacaacattaacgtgcccctggacagcctctgctcc
tcggggctggaggccttggccgagcaggaggtgagtgccgaagacgaggtgctgacagag
tacacgggccagacctcggaccacgcgagccaggtcaccttcacccacaggatcaacctc
cccaaaaaggcctgcccatgcgccagctctgcccaggtgctgcaggagctgctgagccga
atcgagatgctggagagggaggtgtcagtgcttcgggaccagtgcaccagcaactgctgc
caggagagtgcggccacaggacaactggattatatccctcactgcagtggccacggcaac
tttagcctcgagtcctgtggctgcatctgccatcaaggctggtttggcaagaactgctcg
gagccctactgccccctaggctgctccagtcggggcgtgtgtgtggatggccagtgcatc
tgtgacagcgagtacagcggcgacgactgctcagagctccggtgcccgacagactgcagc
tcccgggggctgtgcgtggacggggagtgtgtctgtgaagaggcctacactggcgagggc
tgcagcgagctgaggtgccctggggactgttcggggaaggggagatgtaccaacggtacc
tgcctgtgccaggagggctacgctggtgaggactgcggccagcagcggtgtctgaacgcc
tgcagtgggcgaggacactgccaggaggggatctgcttctgtgaagagggctaccaaggc
cctgactgctcggcagttgcccctccagaggacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag
ccgacggccctggggggcctccagctccagcagcgggtgcctggagattggagtggtgtc
accatctcggagctggagccaggtctcacctacaacatcagcgtctacgctgtcattagc
aatatcctcagccttcccatcacggccaaggtggccacccatctctccactcctcaaggg
ctacgattcaagacaatcacagagaccaccgtggaggtgcagtgggagcccttctcattc
tccttcgatgggtgggagatcagcttcattccaaagaacaatgaaggaggggtgattgcc
cagctccccagtgacgttacatccttcaaccagacgggattaaagcctggggaggaatat
actgtcaatgtggtggctctgaaagagcaagcccggagcccccctacctcggccagcgtc
tccactgtcattgatgggcccacgcacatcctggttcgagatgtctccgacactgtagcc
ttcgtggagtggaccccacctcgagccaaagtcgatttcattctcttgaagtacggcttg
gtgggtggggaaggcgggaagaccaccttccgactgcagcctcccctgagccagtactcg
gtacaggccctgaggcccggctcccaatatgaggtgtgggtcagcgcagtccggggaacc
aacgagagcgagtccaccaccacccagttcacaacagagatcgacgcccccaagaacctg
cggcttggttcccgcacagcaaccagccttgaccttgagtgggacaacagtgaagcagag
gttcaggagtacaagattgtgtacagcaccttggcgggcgagcagtaccatgagctgttg
gtccccaagagcatcggtccaaccaccagagccacactcacagatctagtgcctggcact
gagtatggaattggaatatccgccatcatgaactcacagcaaagcataccagccaccatg
aatgccaggactgaacttgacagtcctcgagaccttatggtgacagcctcctcagaaacc
tccatctccctcatctggacaaaggccagtggccccattgaccactaccgaatcacattc
accccatcctctgggatcgcctccgaagtcactgtgcccaaggacaggacctcgtacaca
ctgacagatctagagcccggggcagagtacatcatttcaattacagctgagaggggtcgg
cagcagagcttggagtccacggtggatgccttcacaggcttccgccccatctcccatttg
cacttttctcacgtgacctcctccagtgtgaacatcacctggagtgacccatcccctcca
gcagacagactcattctgaactacagcccccgggatgaagaggaagagatgatggaggtc
tctctagatgccaccaagaggcatgctgtcctgatgggcctgcagccagccaccgagtac
attgtgaacttggtggcagtccatggcacagtgacctctgagcccatcatgggctccatc
accacaggaattgatccccccaaagacatcacaatcagcaatgtgaccaaggactcggtt
atggtctcctggagccctcctgttgcgtcttttgattactaccgagtatcatatcggcca
acacaagtgggacggctagacagctcggtggtgcccaacacagtgacagaattcaccatc
agcaagctgcacccagctaccgaatatgaaatcagcctcagcagcgtgcggggcagagag
gagagcgagcggatctgcactctcgtgcacacagccatggacaatcctgtggatctgact
gctaccaacatcactccaacagaagctctgctgcagtggaaggcaccagtgagtgaagtg
gagaactacgtcattgttctcacacactttgcagttgctggagagaccatcctggttgat
ggagacagtgaggaattccagcttgttgacctgcttcctaggacccactataccgtcact
atgtatgccgccagtgggcctctcaccagtggcacgatcagcaccaacttctctaccctc
ctggacgctcctgccaatctgacagcaagtgaagtcaccagacaaagtgccctgatctcc
tggcagcctcccagagcagagactgagaattacatcttgacctacaaatccaccgatgga
agccgcaaggagctgattgtggatgcggaggacacgtggatccgactggagggcctgtct
gagagcacagactacacggtgctcctgcaggcggcccaggacaccgagcggagcagcatc
acctccaccgccttcaccacagggggccgggtcttccctcatcctcaagactgtgcccag
catttgatgaacggagacactctgagcggggtttacaccatcttcctcaacggagagcta
agccggaagttacaggtgtactgcgatatgacgaccgacgggggtggctggattgtattc
cagaggcggcagaatggccaaactgattttttccggaaatgggctgagtaccgcgttggc
ttcgggaacctggaggatgagttttggctggggctggacgacatacacgggatcacgtcc
cagggccgctacgagctgcgcgtagacatgcgtgacggccaggacgccgccttcgcctac
tatgacaagttctctgtcgagggcagccgaagcctgtacagactccgcataggaggctac
aacggcactgcaggggactccctcagctatcatcagggccgccctttctccacagaggac
agagacaatgatgttgcagttaccaactgtgccatgtcatacaagggggcttggtggtat
aagaactgccaccggaccaacctcaatgggaaatacggggagtccaggcacagccagggg
atcaactggtaccattggaaaggccacgagttctccatcccctttgtggaaatgaagatg
cgcccctacagccaccgtctcatggcggggaggaaacggcggtccttgcagttctaa
DBGET
integrated database retrieval system
