Lipotes vexillifer (Yangtze River dolphin): 103088885
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Entry
103088885 CDS
T03090
Name
(RefSeq) collagen alpha-5(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04151
PI3K-Akt signaling pathway
lve04510
Focal adhesion
lve04512
ECM-receptor interaction
lve04820
Cytoskeleton in muscle cells
lve04974
Protein digestion and absorption
lve05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103088885
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103088885
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103088885
09142 Cell motility
04820 Cytoskeleton in muscle cells
103088885
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103088885
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
103088885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lve04147
]
103088885
00536 Glycosaminoglycan binding proteins [BR:
lve00536
]
103088885
Exosome [BR:
lve04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103088885
Glycosaminoglycan binding proteins [BR:
lve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103088885
Hyaluronan
Extracellular matrix or blood plasma proteins
103088885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
VWA_CoxE
Copine
Integrin_beta
Leptin
Motif
Other DBs
NCBI-GeneID:
103088885
NCBI-ProteinID:
XP_007470709
UniProt:
A0A340YFB1
LinkDB
All DBs
Position
Unknown
AA seq
2189 aa
AA seq
DB search
MKILLIVFVLILWTETLTYQSPGPGPEYADVVFLVDSSNHLGIKSFPFVKMFINKMISSL
PIEAHKYRVGLAQYSNVLHREFQLSTFKSRGPMLNHLKKNFRFLGGSLRIGNALREVHTT
YFSNGRDRRQFPPILVVLASAESEDAVEEASKALHSDGVRIISVGMQGTPEETLKAMATG
QFHYSLQTVQDLSMFSQNMTQILKDAAQYKEVAAHSHTVVPFPRACQKDSLADLMFLVDE
SVGTKQNLRNLQNFLKNITSSMDVKDKCLRLGLMSYSDRVQTFSPLSSSTTQSEFQKQIQ
KLSLRAGKSNAGAAIEKMRREGFSASSGSRRAQGVPQIAVLVTDRPSDDKVREAALNLRL
EDVTVFAMGIQGANKTQLEEIASYPPGQTISMMKSYADLEIYSKNFLKKLQNEIWSQIST
HAEQMELDKTGCVDTKEADLYFLIDGSSSIQNKHFEQIKEFMLAVIEMFSIGPDKVRVGA
VQYSHKKEVEFDINDYPNDVTLRKAVSNIKQLGGRTLTGAALDFILPLIRKGRKQRMNEV
PCYLIVLTDGSSMDGVLEPAERLRAEHITIHVVGIGEANRAKLQQIAGAEERVNLGQNFD
SLKSIKNEVVRSICAEKGCEYMKVDIMFLVDGSSSIGSENFEKMKTFMKNLLAKVQIGPD
KTQIGVIQFSDYNREEFQLDKYYTQKEISDAINRMSPINQNTLTGSALTFVDPYFTEPKG
GRSMVKKFLILITDGEAQDDVIDPAKALRDKGVVIFSVGVYGANRSQLEEISGDGSLVFQ
VENFDDLKAIENKLIFRVCALHDCKRIRQLDIVFVLDHSGSILPQDQESMINVTIHLVKK
SDVGPDRVQFGALRYSDHPEVLFYLNTYSNRSAIIEHLRRPRDTEGNTFTARALQHANNL
FMEEHGSRLKQNVKQMLIIITDGVSHDRNQLSDTASKLRAKGIIIYAVGVGKADQEELET
MAGNKNYTIHVSNFNKLKDIYLPLQDSMCTNAQEVCNIQEADVIFFCDGSDMVSDSDFVT
MTTFLSDLIDNFDIQSQRMKIGIAQFGSRYQEIIELQNSLTKTQWKSRIQTMTKSNGLPR
MDLALKQVSVMFEQSTGGRRKAGVPQTLVVITSGGPRYDVAEAVKTLREDGICILALGIG
KVYKEELLSITGNSEKIITFKDFDKLKNVDVKKRMVREICQSCGKTNCFLDIVVSFDIST
HLMGQPLFHGHPQLESYLPGILEDITSLRGVSCGAGTEVQVSMAFKVNSDQNFPAKFQIY
QETIFDSLLQVTVNGPTHLNAQFVQSMWDTFKDTSASRGQVLLIFSDGLGGESKIMLEDK
SDRLREAGLDALLVVSLNSTSHDEFSSFEFGKGFDYRVHLTIGMKELGNMLSQYLGNIAE
RTCCCTFCKCSQAPGPQGIRGPQGLKGFPGLKGSRGHRGEEGDPGRQGDTGPQGDRGIEG
CPGERGQKGAKGFAGYKGEHGDDGIDGLYGEEGFHGLPGKKGEKGDPGSQGSPGSRGPPG
GHGEKGFPGDPGNPGQSNNIKGQKGSKGKQGRQGRTGPKGTQGSPSSRGSSEREGQRGVR
GASGGPGNPGLKGVSGAEGLRGSQGSNGLRGRKGEKGNEGHKGPQGAPGPVGDKGSVGRP
GLLGKKGEPGIPGDPGPLGQAGPQGKQGDYGIPGYGPMGRKGVKGRRGFFGDMGQKGVVG
DPGIPGGPGPKGFRGLKLTVGLKGEEGSQGPQGPPGKRGPKGMAGQRVYSQCDLIQFMQD
HSPCWKEKCPVYPTELVFALDQSYDITEQRFNETRDIIISIVNDLHIRENNCPVGARVVV
VSYDLDTNYLIRGSDYHSKKQLLQLLSQIKYQNSGEVRDIGNSMKFVARNIFKRMLAGAN
VQRVAVFFSNGQSASMSSIITATMEFSALDISPAVFAFNERVSLEEAFAFDNTGTFQVLP
VPPNGEYEPLERLRHCTLCYDKCFPNTCKKEIFLPENSYMDVAFLLDNSRNITSDEFKDV
KALVSSMLDNFDIASDPVTSDSGDRIALLSYSPWYGRKKDVVKTEFEFTTYDNQALMKRH
IQTYLQQLNGESTIGHALLWTVEYLFPGTPKLRKHRVIFVVSAGENHERKEFLKKMALRA
KCQGYVIFVISLGSTHKEDMEELASHPLDHHLIQLGRIHKPNLDYVVKFLKPFVYSVRRG
FNQYPPLMLENICRLINSKEEDNQSINLL
NT seq
6566 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctgttaattgtatttgttctcatcctttggactgaaacactgacatatcag
agcccagggccaggccctgagtatgctgacgtggtgtttctggtggatagctccaaccac
ctgggaattaaatccttcccatttgtgaagatgttcatcaacaagatgatcagcagcctc
cccatagaggcccacaagtaccgtgtgggcctggcccagtacagcaacgtgctccataga
gaattccagctcagcaccttcaagagcagaggccccatgttgaaccacctcaagaagaac
ttcaggttcctgggcggttccctgcggattgggaatgctctccgggaggtgcacacgacc
tacttctcaaacgggagggacaggagacagtttcctccgatcctggtggtcttggcttca
gccgagtccgaggatgccgtggaagaggcctccaaggcgctgcacagtgacggggtgagg
atcatctcagtggggatgcaggggacacctgaggagactctgaaggccatggccacaggc
cagttccactacagcctccagacggtccaagatctcagcatgttctcccaaaacatgacg
cagattctcaaggatgcggctcagtacaaggaggtagcagcccactctcatacagtagtc
cccttccccagggcctgtcagaaagattcgcttgccgacctcatgttcctggtggatgag
tctgttgggaccaaacagaatctaaggaacctgcagaacttcctgaagaatatcacctcc
tccatggatgtgaaagacaaatgcctgcggcttggtcttatgagttacagtgacagagtt
cagactttttctcctctgagctcaagcacaacccaatctgaatttcagaagcaaatccag
aagctttctctgcgggctgggaaatccaatgctggtgctgccattgagaagatgaggaga
gaaggcttctcagcatcaagtggcagcagaagggcacagggagtgccccagattgcagtc
ctggtcactgacagaccatcagatgacaaggtgcgtgaggctgcactgaatctccgcctg
gaggatgtaactgtgtttgccatgggcatccaaggggccaacaagacccagttagaagaa
atagcatcttaccctccgggacagaccatctccatgatgaagtcctatgcagacttggaa
atttacagtaagaacttcttgaaaaagctccagaatgaaatatggtcccaaatttcaact
catgctgaacaaatggaacttgataaaactggctgtgtagatacaaaagaagctgatctc
tatttcctcattgatggctcaagcagcattcagaataaacactttgagcaaatcaaggaa
tttatgttggcagtgatagagatgtttagcatcggcccagacaaagtccgagttggagct
gtgcagtattcccacaagaaggaagtggaatttgatatcaatgactatcctaatgatgtg
acattaagaaaggctgtctctaacatcaagcaacttggaggcagaactcttactggggca
gccctggatttcattctgccactaataaggaagggaaggaagcagagaatgaacgaagta
ccctgttacctcattgtgttgactgatgggagctccatggatggtgtcctggaacctgct
gagagactaagggctgaacacatcaccatccacgtggtcggcattggtgaggctaacaga
gcaaaactgcaacaaattgctggggcagaggaaagagttaaccttgggcagaactttgat
tctttaaaaagcatcaaaaatgaagttgttcgcagcatctgtgctgagaaaggatgtgaa
tacatgaaggtcgatatcatgtttctggtggatggatctagcagtataggatctgaaaat
tttgagaaaatgaaaaccttcatgaaaaacctgttagctaaggttcagattggcccagac
aaaacccaaattggtgtcattcaattcagtgattataatagggaagaattccagcttgat
aaatactatacacaaaaagaaatttctgatgcaataaacagaatgtctcccatcaatcaa
aacactttgactggaagtgcactaacctttgtggatccatacttcactgagcccaagggg
ggccgttcaatggtcaaaaagtttctcatcctcatcactgatggagaagcccaagatgat
gtgatagaccctgcaaaagctcttcgggacaaaggtgtggtcatcttctctgtgggggtg
tacggggccaatagatctcagctggaggagatcagtggggacggcagcctcgtcttccaa
gttgagaacttcgatgatctaaaggcaatagagaataaactcatcttccgcgtgtgtgct
cttcatgattgtaaaaggattagacagttagacattgtgtttgtgctggaccattcaggc
agcatcctgccccaagaccaagaaagcatgatcaacgtcactatccatttggtgaagaaa
tcggatgttggcccggacagagttcagtttggagcgctcagatactcagatcatcctgag
gttctcttctacctcaatacgtactcaaacagatcagccatcatcgagcatctgaggagg
cccagggacacggaagggaataccttcactgccagggctctgcagcatgcaaacaacctg
ttcatggaggaacatggcagccgtctcaagcaaaacgtgaagcagatgctgatcatcatc
acagatggggtatcccatgaccgaaatcagctcagtgacacagcttcaaaattaagagcc
aaaggcatcatcatctacgcagtgggtgtaggaaaggccgaccaagaagaactggagact
atggcggggaataaaaactatactatccacgtcagtaatttcaacaaactgaaagatatt
tacctgcctctgcaagatagtatgtgtaccaatgcacaagaggtctgtaacattcaagaa
gccgatgtgattttcttttgtgatggctctgacatggtatctgattcagactttgtcacc
atgacaactttcttgtcagacttaattgataattttgacattcagtctcaaaggatgaaa
attgggatagcacaatttgggagccgctaccaagaaattattgagttgcaaaactctctg
actaaaacccagtggaagtcccgaattcaaactatgacgaagagcaacgggcttccgcga
atggacttggcgctgaaacaagtgagcgttatgtttgagcaatccactggtgggagaagg
aaggctggtgtccctcagactttggtggttatcacatctgggggtccccgctatgatgtg
gcggaggcagtgaagaccctgagagaagatggtatttgcattctggctttgggcatagga
aaggtttataaggaagagctcttgtcaataacgggcaattctgaaaaaatcatcactttt
aaagactttgataaactaaagaatgtggatgtgaaaaaaagaatggtccgtgaaatctgc
cagagttgcgggaaaaccaactgctttctggacatagtggtcagctttgacatttccact
cacctgatgggacagccattattccatggccacccccagctggaatcatacctcccaggc
atcttagaggacattacctccctcaggggtgtgagctgcggggcaggcacagaggtacag
gtgagcatggcctttaaggtgaacagtgaccagaatttccccgccaagttccaaatctac
caggaaacaatatttgacagcctactgcaagtcaccgtcaacgggccaactcacctgaat
gcacagtttgtgcagtccatgtgggacacgtttaaggatacgtctgcatcccgaggacag
gtattactcatcttttcagatggtcttgggggtgaaagcaaaataatgcttgaagataaa
tcagacaggctcagagaagcaggacttgatgctttgctggtggtttccctaaactcaacc
tctcatgatgagttttccagctttgaatttggaaaaggatttgattacagggttcacctg
accattggaatgaaagaattgggcaatatgttatcacagtatctgggaaacattgcagag
aggacttgctgctgtacgttttgcaagtgttcacaggctccaggacctcaagggatccga
ggaccacaaggcttaaagggttttccaggtctgaaaggcagcagaggacacaggggagag
gagggggaccctggaagacaaggagacactggaccccaaggagatagagggattgaagga
tgtccaggggagcggggtcaaaagggagccaaaggatttgctggatataagggagaacat
ggagacgatgggattgatggactctatggggaagagggctttcatggacttcctgggaaa
aagggagaaaagggtgatccagggtcccagggcagcccaggttccagaggccctcctggg
ggacatggggagaagggcttcccaggggatcctggtaatccaggacaaagcaataacatc
aaaggacaaaagggctccaaaggaaaacaaggaagacaaggtagaaccggcccgaaaggg
acacaaggcagtcctagttccagagggagcagtgaaagagaaggccagaggggagtccgg
ggtgcctcggggggaccagggaaccctggacttaaaggtgtatcaggagctgaaggatta
cgaggctcacaggggtcaaatggacttcgcggcaggaaaggagagaagggaaacgagggg
cacaaaggacctcagggtgctcctggaccagtgggagataaagggagtgttggaaggcct
ggacttttggggaaaaagggagaacctggaattcctggagatccagggccactggggcaa
gctggaccacaaggaaagcaaggtgattatggcattccgggctatggtcctatgggacga
aaaggagtaaagggccgaagaggattctttggagatatgggtcaaaagggtgttgttggt
gatcctggaattcctggggggcctgggcccaaaggatttaggggactaaaactcactgta
ggcttgaaaggtgaggaaggctctcaaggaccccaaggccctcctggaaagagaggccct
aaaggcatggcagggcagcgggtatattctcaatgtgatctaatccagttcatgcaggac
catagtccttgctggaaagaaaagtgtccagtgtatccaacagagctagtatttgccctg
gaccagtcctatgatatcacagagcagagatttaatgaaacgagggacatcatcatttct
attgtcaatgaccttcacatcagggaaaataattgccctgtgggagcaagagttgtcgtg
gtttcctacgacttagacaccaactacctcatccgtgggtctgactaccatagtaagaag
caactccttcagcttctttcccaaattaaatatcaaaactccggagaagtccgagacatt
ggtaactcgatgaagtttgtggctcggaacatcttcaagcggatgttagcaggagccaat
gtgcagagagtcgctgtgttttttagcaatggacaatccgccagtatgtcatccatcatc
acggccaccatggagtttagtgctttggatatcagccctgcagtttttgcttttaatgaa
agagtttcccttgaggaggcttttgcgtttgacaacacgggaacatttcaggtgcttcct
gttcctccaaatggggaatatgaaccattagaaagacttcggcactgtactctttgctat
gataaatgttttccaaatacttgcaagaaagagattttcttacctgaaaattcatacatg
gatgtcgccttcctcttagacaattctaggaatataacaagtgatgagtttaaggatgtc
aaagccttggtgagctcaatgcttgacaactttgatattgcttcagaccctgtaacctca
gactctggtgataggattgccttgttgagttactctccctggtatgggaggaagaaggat
gtggtaaaaacagagtttgagtttacaacttatgacaatcaagctctaatgaagaggcac
atccagacttacctccaacagctaaatggagaatccaccattggccatgccctactatgg
actgtggagtatctcttcccaggaacacccaaactgagaaaacatagggtcatctttgta
gtctctgctggagaaaatcatgagagaaaggaattcttaaagaagatggctctgagggcc
aagtgtcaaggctatgtcatatttgtgatttctctgggctctacacataaggaggacatg
gaggagctagccagccacccacttgatcaccatctgatacagcttgggagaattcataaa
ccaaacctggattacgttgtgaagtttttaaagccatttgtgtactcagttagacgagga
ttcaatcagtacccaccactgatgcttgagaacatctgcagactcatcaattcaaaggaa
gaggataatcaaagtatcaatctcct
DBGET
integrated database retrieval system
