Lipotes vexillifer (Yangtze River dolphin): 103089224
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Entry
103089224 CDS
T03090
Symbol
TBC1D1
Name
(RefSeq) TBC1 domain family member 1 isoform X1
KO
K18341
TBC1 domain family member 1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04152
AMPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
103089224 (TBC1D1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lve04131
]
103089224 (TBC1D1)
Membrane trafficking [BR:
lve04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103089224 (TBC1D1)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
103089224 (TBC1D1)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
103089224 (TBC1D1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
CC_Liprin_beta
Motif
Other DBs
NCBI-GeneID:
103089224
NCBI-ProteinID:
XP_007449465
UniProt:
A0A340WR74
LinkDB
All DBs
Position
Unknown
AA seq
1259 aa
AA seq
DB search
MEPITFTARKHPFPSEVSVEFSLQLVGFLPVHSLTTMPMLSWVVAEVRRLSRQSATKESG
TKQVHLCISPSGLRCEPEPGKSQQWDPLICSSIFECQPQRVHKLIHNSHDPSYFACLIKD
DEANQQSICYVFKADGQTKVPEIISSIRQAGKIARQDELRCPSEFDDTFAKKFEVLFCGR
VAVAHRKAPPALIDECIEGFSHVSGGGFSSDQFRAAPQLPGDRERGPRPMRKSFSQPGLR
SLAFRKEFQDAGLRSSSFFSSFEENDIENHLISGHNIVQPTDIEENRTMLFTIGQSEVYL
ISPDTKKIALEKNFKEISFCSQGIRHVDHFGFICRESSGGGGFHFVCYVFQCTNEALVDE
IMMTLKQAFTVAAVQQTAKATSQLCEGCPLQGLHKLCERIEGMNSSKTKLELQKHLTTLT
NQEQATIFEEVQKLRPRNEQRENELIVSFLRCLYEEKQKVHVHIGEIKQASQIAAENIGS
ELPSSATRFRLDMLKNKAKRSLTESLESILSRGNKARGLQEHSASLDLDNSVSSTLSNTS
KEPSVCEKEAFPISESSFRLLGSSDDLSSDSESHAAEEPALLSPQQGFRRRANTLSHVPV
ECQQPLQQAQGSPGVLQRKLVRYHSVSTETPHERNGNRPPVSESEGGSGQSSAAPPPRLT
PSASSPNFFKYLKHNPSGEQSGNAVPKSISYRNALRKKLHSSSSVPNFLKFLAPVDENNT
SDFMNTKRDFESKASHLGDASGTPVKTRRHSWRQQIFLRVATPQKACDSPSRHEDYSELG
ELPPRSPLEPVCEDGPFGPVPEEKKRTSRELRELWQKAILQQILLLRMEKENQKLQASEN
DLLNKRLKLDYEEITPCLKEVTTVWEKMLTTPGRSKLKFDMEKMHSAVGQGVPRHHRGEI
WKFLAEQYHLKHPFPSKQQPKDTPYKELLKQLTSHQHAILIDLGRTFPTHPYFSAQLGAG
QLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMGEEEAFTTLRFLMFDMGLRKQYRPD
MITLQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTVFASQFPLGFVARVFDM
IFLQGSEVIFKVALSLLGSHKPLILQHENLETIVDFIKSTLPNLGLVQMEKTISQVFVMD
ISKQLQAYEVEYHVLQEELIDSSPLSDNQRMDRLEKTNSSLRKQNLDLLEQLQVANGRIQ
SLEATIEKLLTSESKLKQATLALELERSALLQTVERLQGQMAELGGPEPDPAPPEPADH
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaataaccttcacagcaaggaaacatccgtttcctagcgaggtctcggtggaa
tttagcctccagctggtaggcttcttacccgtgcattctctgaccaccatgcccatgctg
tcttgggtcgtggcagaggtgcgaaggctcagccggcagtccgccacaaaggagtctggt
accaagcaagtccacctttgcatttcgccctccggactgagatgtgagcctgagccagga
aaaagtcaacaatgggatccactgatctgttccagcatcttcgagtgtcagcctcagcga
gttcacaaactgattcataacagtcacgacccaagttattttgcttgtttgattaaagac
gatgaagccaatcagcagagtatctgctatgtgttcaaagccgatggtcaaacaaaagtg
cctgagatcatcagctccatccggcaggccgggaagatcgcccgccaggacgagctccgc
tgcccttccgagttcgatgacacgttcgccaagaagttcgaggtgctgttctgcggccgc
gtggcggtggcgcacaggaaggccccgcccgccctgatcgatgagtgcatcgagggcttc
agccacgtgagtggcggcggcttctcctcggatcagttccgggcggcgccgcagctgccg
ggggaccgggagcggggcccacggccgatgcgcaagtccttctcccagcccgggctgcgc
tccttggccttcaggaaggagtttcaggatgcaggcctgcggagtagtagttttttcagc
tccttcgaggagaacgacatcgagaaccacctgattagtggacacaatattgtgcagccg
acggatattgaggaaaatcgaactatgctcttcacgattggtcagtctgaagtttacctc
atcagtcctgacaccaaaaaaatagcgttggagaaaaattttaaggagatatccttttgc
tctcagggtattagacatgtggaccactttgggtttatctgccgagagtcttcgggaggt
ggaggctttcatttcgtctgttatgtgtttcagtgcacaaatgaagctctggtggatgag
atcatgatgaccctgaagcaggccttcacagtggccgcagtgcagcagacagcgaaggcg
acgtcccagctgtgtgagggctgccccctgcagggcctgcacaagctctgtgagcggatt
gagggaatgaattcttccaaaaccaaactagaactccagaagcacctgacaacattaact
aatcaggagcaagcaactatttttgaggaggttcagaaattgagaccaagaaatgagcag
cgagagaatgaattgattgtttctttcctgagatgtttatatgaagagaaacaaaaagtt
cacgtccatattggggagataaagcaggcatcacagattgcagcagagaatattggaagt
gaattaccatctagtgccactcgatttaggctagatatgctgaaaaacaaagcgaagaga
tctttaacggagtctttagaaagtattttgtcccggggtaataaagccagaggcctccag
gagcactccgccagtctggatctggacaactccgtgtctagcacattaagtaacaccagc
aaagagccgtctgtgtgtgaaaaggaggcctttcccatctctgagagctccttcaggctc
ctgggctcctcggatgacctgtccagtgactcagagagccacgccgcagaagagccagcc
ctgctgtcaccccagcagggcttcaggaggcgcgccaacactctgagtcacgtccccgtg
gaatgccagcagcctctgcagcaggcacagggatctccaggggtcttgcaaaggaaactt
gtgaggtatcactcagtgagcacagagacgcctcatgaacgaaatgggaatcgtccccct
gtcagcgagtctgaaggtggctcaggtcagtcctcagctgctcctccacctcgtcttacc
ccctccgcctcctcgcccaatttctttaagtacctcaaacataacccaagtggagaacag
agtggcaatgccgtgccaaagagcatctcctaccgtaatgccctgcggaaaaaacttcat
tcttcttcctctgtgccaaattttctaaaatttctggctcctgtagatgaaaataacacc
tctgactttatgaacacaaaaagggactttgagtccaaagccagccatcttggtgacgcc
agcgggacccccgtaaagacacggagacactcatggaggcagcagatcttccttcgagtg
gccaccccgcagaaagcctgcgattctcccagcagacacgaagattattcagagctggga
gagcttcccccacgatctcctctagaaccagtttgtgaagatggaccctttggccctgtc
ccagaggaaaagaaaaggacatctcgtgaacttcgagagctgtggcaaaaggccattcta
caacagatactgctcctcaggatggagaaggaaaatcagaagctgcaagcctctgagaat
gatttgctgaacaagcgcctgaagcttgattatgaagaaatcactccttgtcttaaagaa
gtaactacagtgtgggaaaagatgcttaccactccaggaagatcaaaacttaagtttgac
atggaaaaaatgcactcggctgttgggcaaggtgtgccgcgacatcaccggggcgaaatc
tggaaattcctagcagagcaataccacctaaaacacccgtttcccagtaaacagcagcca
aaggacacgccatacaaagagctcttaaagcagctcacctcccaccagcacgccattctc
atcgacctcgggcgaacctttccaacacatccatacttctctgctcaactaggagcgggg
cagctgtcactttacaacattttgaaggcctactcgcttctagaccaggaagtaggctat
tgccaaggtctcagctttgtagcaggcattctgctgcttcacatgggcgaagaagaggca
ttcaccacgctcaggtttctgatgtttgacatgggtctgcggaaacagtatcggccagac
atgattactttacagatacagatgtaccagctctcgaggctgctccacgactaccaccga
gacctgtacaatcacctggaggagcacgagatcggccccagcctctacgccgcgccctgg
ttcctcacagtgttcgcctcgcagttccccctggggttcgtagccagagtctttgatatg
atctttcttcagggatcagaggtcatatttaaagtggctttaagtctgttgggaagccat
aagcccttgattctgcaacatgaaaacctagaaactatagttgactttataaaaagcacg
ctacccaacctgggcttggtgcagatggaaaagaccatcagtcaggtgtttgtgatggac
atctctaaacagttacaagcttatgaagttgagtaccatgtgcttcaggaagaacttatc
gattcctctcctctcagtgacaaccaaagaatggacagattagagaaaaccaacagcagc
ttacgcaaacagaaccttgacctcctcgaacaactgcaggtggctaatgggaggatccag
agcctggaagccaccattgagaagctcctgaccagtgaaagcaagctgaagcaagcgacc
ctggccttggagctggagaggtcagccctgctgcagacagtggagcggctccaggggcag
atggcagagctgggtggcccggagcctgaccccgcaccgcccgagcctgcggaccactga
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