KEGG   Lipotes vexillifer (Yangtze River dolphin): 103089521
Entry
103089521         CDS       T03090                                 
Symbol
HLTF
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:lve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lve04121]
    103089521 (HLTF)
   03400 DNA repair and recombination proteins [BR:lve03400]
    103089521 (HLTF)
Enzymes [BR:lve01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     103089521 (HLTF)
Ubiquitin system [BR:lve04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    103089521 (HLTF)
DNA repair and recombination proteins [BR:lve03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    103089521 (HLTF)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 DEAD zf-RING_UBOX zf-RING_2 ResIII RING_XB3-XBAT31 zf-RING_5 HDA2-3 zf-ANAPC11 zf-C3HC4_4 zf-Nse Prok-RING_4 zf-rbx1 SURF2
Other DBs
NCBI-GeneID: 103089521
NCBI-ProteinID: XP_007471370
UniProt: A0A340YIW2
LinkDB
Position
Unknown
AA seq 1010 aa
MSWMFKRDPVWKYLQTVQYGVHGNFPRLSYPTFFPRFEFQDIIPPDDFLTSDEELDSVLF
GTLRGHVVGLRYYTGVVNNNEMVALQREPDNPYDKNAIKVNNVNGNQVGHIKKDLAAALA
YIMDNKLAQVEGVVPFGANNAFTMPLHMTFWGKEENRKAVLDQLKKHGFKLGPAPKTLGF
SLESGWGSGRXXXXPSYSMPVHAAVQMTTEQLKTEFDKLFEDLKEDDKTQEMEPAEAIET
PLLPHQKQALAWMVSRENSKELPPFWEQRSDLYYNTITNFSEKDRPENVHGGILADDMGL
GKTLTAIAVILSNFHDGKSLPIERIKKNQLKKECNVYDESMKLGGNNTSEKADGLIKGSR
CSGEPSISDDKGKNKYPKSEFSSSRPKRRKTAVQYTESSDSEEIETNELAQKMKGKLKNT
QSETKIREIAGSSKVKEDAEFACALTSSTPATKKKMLKKRASSVESSKKTDIEERPRTTL
IICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRVRDPALLSKQDIVLTTYNILTHDYG
TKADSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLEAERRWVLTGTPIQNSLKDLWSL
LSFLKLKPFLDREWWHRTIQRPVTMGDEGGLRRLQSLIKNITLRRTKTSKIRGKPVLELP
ERKVFIQHITLSDEERKIYQSVKNEGRATIGRYFNEGTVLAHYADVLGLLLRLRQICCHT
HLLTNAVSSSSPSGNDTPEELRKKLIRKMKLILGSGSDEECAICLDSLTVPVITHCAHVF
CKPCICQVIQNEQPHAKCPLCRNDIHGDNLLECPPEELACDTEKKPNMEWTSSSKINALM
HALIDLRKKNPNIKSLVVSQFTTFLSLIETPLRASGFVFTRLDGSMAQKKRVESIQCFQN
TEVGSPTIMLLSLKAGGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITK
FIVKDSVEENMLKIQNTKRELAAGAFGTKKADASEMKQAKINEIRTLIDL
NT seq 3033 nt   +upstreamnt  +downstreamnt
atgtcctggatgttcaagagagatcctgtttggaagtacttgcagactgtccagtacgga
gtccatggaaattttccacgcctctcatatccaactttctttcctcgttttgaattccaa
gatattattcctccagatgatttcctaacgagcgatgaagagctagattcagttttattt
ggaactttgagaggtcatgtagttggactacgctattacacaggagtagttaataataat
gaaatggttgcattacaacgagaacccgataacccttatgataagaatgcaattaaagta
aacaatgtgaatggaaatcaggttggccatataaagaaagatcttgcagctgccttggcc
tatatcatggacaacaaattggctcaagttgaaggggtagttccttttggtgcaaacaat
gcttttaccatgcctttgcatatgactttttggggaaaagaagaaaatagaaaagcagtt
ttagatcagttgaagaaacatggatttaaattgggtcctgcaccaaagactttaggattc
agtttggaaagtggttggggctctggaagannnnnnnnnngaccaagctatagtatgcca
gttcatgctgcagtacagatgacaactgaacagcttaagacagagttcgacaaattgttt
gaagatttaaaggaagatgataaaactcaggaaatggaaccagctgaggctattgaaaca
ccgttgcttccacatcaaaaacaagctctagcttggatggtttcacgggaaaacagtaaa
gaacttccaccattctgggaacagcgaagtgacttatactataacacaataacaaatttt
tctgaaaaggaccgaccagaaaatgttcatggtggaattttagctgatgatatgggtttg
ggcaaaactctgacagccattgcagtgattctttccaacttccatgatggcaaatctctt
cctattgaaagaattaagaaaaatcagctgaagaaggaatgtaatgtttacgatgaatct
atgaaacttggagggaacaataccagtgaaaaggcagatggactaatcaaaggatctaga
tgtagtggagaacccagtatttcagatgacaagggaaagaataaatatcccaagtcagaa
ttctctagctcccgccccaaaaggagaaaaactgcagtacagtacactgaaagcagcgat
tcagaggaaattgaaacaaatgaattggcacagaaaatgaaaggcaaactgaaaaataca
cagtcagagactaagatcagagaaatagcaggatcatctaaggttaaagaagatgcagag
tttgcatgtgcacttacttcatctacccctgcaaccaaaaagaaaatgttgaaaaagaga
gcatcttcagtggagagttcaaagaaaactgatattgaagagagaccaagaacaacactg
atcatctgtccactttctgtgttaagcaactggattgaccagtttggacaacatataaaa
tcagatgtgcacttgaatttttatgtttattatggtcctgatcgtgttagagacccagcc
ttgctttcgaaacaggatattgttttgactacatataatattttaactcatgactatggg
actaaagctgatagtccgctacatagcataagatggctaagagtgatcctggatgaagga
catgccatacgaaatccaaatgctcagcagacaaaagctgtacttgatttagaagcagaa
agaagatgggtattgacaggcactccaattcagaattctttaaaggacttgtggtctctt
ctttccttcttaaaacttaaaccatttcttgatagagaatggtggcatagaacaatacag
cgtcctgtcacaatgggagatgaaggtggacttaggcgtttacagtccctaattaaaaat
attacacttagaagaacaaagacaagcaaaattagaggaaaacctgttttggagttacca
gaacgtaaagtatttattcagcacattacactttcagatgaagagaggaagatttaccag
tctgtgaaaaatgaaggcagagctactattggaaggtattttaatgaagggactgtcctt
gcacactatgcagatgtcctgggtcttttgcttagattgcgacagatttgttgtcatact
caccttcttacaaacgcagtgtcttccagtagtccctcaggaaatgatacacctgaagaa
ctacgaaagaagttaataaggaagatgaagttaattctgggctcaggttctgatgaagaa
tgtgcaatttgcttggattctttaacggttcctgtcataacacattgtgcacacgtcttt
tgtaaaccctgcatttgccaagtcattcagaatgagcagccacatgctaaatgcccttta
tgcagaaatgatatacatggagacaatttattagaatgtcctccagaagaattggcatgt
gacactgagaaaaagcctaatatggaatggacatccagttcgaagattaacgctctaatg
catgcattgattgatttaagaaagaagaaccccaacataaaaagtttagttgtttctcag
tttacaacatttctgtctttaatagaaacaccactcagagcctctggatttgtgtttact
cgtttggatggttctatggcccaaaagaaaagagttgaatcaattcagtgttttcaaaac
actgaagtaggatctccaactataatgcttctgtccttaaaagcaggtggagttggtttg
aatctttctgcagcttctcgagtatttttaatggatccagcctggaatccagctgctgaa
gatcagtgctttgacaggtgccatagacttggccagaagcaagaagttattatcacgaaa
ttcattgtgaaggattctgttgaagaaaatatgctgaaaatacaaaacacaaagagagaa
cttgcagctggagcctttggaactaaaaaagcagatgctagtgaaatgaaacaagctaaa
attaatgaaatcagaactttaattgatttataa

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