Lipotes vexillifer (Yangtze River dolphin): 103089612
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Entry
103089612 CDS
T03090
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03030
DNA replication
lve03410
Base excision repair
lve03420
Nucleotide excision repair
lve03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103089612 (RFC5)
03410 Base excision repair
103089612 (RFC5)
03420 Nucleotide excision repair
103089612 (RFC5)
03430 Mismatch repair
103089612 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lve03032
]
103089612 (RFC5)
03036 Chromosome and associated proteins [BR:
lve03036
]
103089612 (RFC5)
03400 DNA repair and recombination proteins [BR:
lve03400
]
103089612 (RFC5)
DNA replication proteins [BR:
lve03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103089612 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
103089612 (RFC5)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103089612 (RFC5)
DNA repair and recombination proteins [BR:
lve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103089612 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
103089612 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_16
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
AAA_14
DEAD
DUF815
ResIII
nSTAND3
AAA_5
AAA_19
ATPase_2
AAA_30
PhoH
TIP49
TniB
AAA_7
Thioredoxin_6
DNAX_ATPase_lid
Mg_chelatase
NPHP3_N
bpMoxR
AAA_25
AAA_3
ABC_tran
AAA_28
Motif
Other DBs
NCBI-GeneID:
103089612
NCBI-ProteinID:
XP_007455912
UniProt:
A0A340X7B6
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
METSAHKQQQQQQPEGGKIRNLPWVEKYRPQTLDDLISHQDILSTIQKFISEDRLPHLLL
YGPPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKG
FKLVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLT
PELMVPRLEHVTEEEKVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTC
TGHPLKSDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPSSVR
IHLLTKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVTEA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcagcgcacaagcagcagcagcagcagcagcccgaggggggcaagatcagg
aacctgccctgggttgaaaaataccggccacagacactggatgatctcatttctcatcag
gacatcttgagtaccattcagaagtttatcagtgaggaccgcctgccgcacctccttctc
tatggtcctccagggacgggaaagacatccaccatcctggcctgtgctaaacagctgtac
aaagataaggaatttggctccatggtcttggagctgaatgcttcagatgaccgaggaata
gatattgttcggggaccaatcctgagctttgctagcacgaggacaatatttaagaaaggc
tttaaactagtgatcttggatgaagctgatgccatgactcaggacgcccagaacgccttg
cggagagtgattgagaaatttactgaaaataccagattttgcctcatctgtaactatctg
tcaaagatcatccccgccttgcagtcccggtgtacaaggttccgatttggtcccctgacc
cctgaactcatggttccccgcctggaacatgtcacagaagaagagaaagttgacataagt
gaagatgggatgaaagcgctcgtaactctttccagtggagacatgcgaagggctctgaac
atcttgcagagcaccaacatggcctttgggaaggtgacagaggagactgtctacacctgc
acagggcacccactcaagtcagacatcgccaacattctggactggatgttgaatcaagac
ttcaccacggcctacaggaatatcatggagttgaaaactctaaaggggttggcattacat
gacatcctgacagagatacacctgtttgtgcacagagttgactttccatcttcagttcga
atacatttattgaccaaaatggcagatattgagtacagactttctgttggcaccaatgag
aagatacagctgagttccctcattgccgcttttcaagtcaccagagacctgattgtcaca
gaagcctag
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integrated database retrieval system
