Lipotes vexillifer (Yangtze River dolphin): 103089781
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Entry
103089781 CDS
T03090
Symbol
PRDM11
Name
(RefSeq) zinc finger protein 862
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lve03000
]
103089781 (PRDM11)
Transcription factors [BR:
lve03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
103089781 (PRDM11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
SET
Dimer_Tnp_hAT
DUF7822
Zn_ribbon_PRDM4
FOG1-like_PR
Phage-scaffold
DUF4954
Motif
Other DBs
NCBI-GeneID:
103089781
NCBI-ProteinID:
XP_007455863
UniProt:
A0A340X2T4
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MTENMKECLAQTKAAVGEMVTVVKTEVCSPLRDQEYGQPCSRRPDPSAMEVEPRKLKGKR
DLIMPKSFQQVDFWFCESCQEYFVDECPNHGPPVFVSDTPVPVGIPDRAALTIPQGMEVV
KEASGENDVRCINEVIPKGHIFGPYEGQISTQDKSAGFFSWLIVDKNNRYKSVDGSDETK
ANWMRYVVISREEREQNLLAFQHSECIYFRACRDIRPGERLRVWYSEDYMKRLHSMSQET
IHRNLARGEKKLQREKSEQALDNPEDLRGPLQLPVLRQGKSPYKRGFDEGDVHPQAKKKK
IDLIFKDVLEASLESAKVEAHQLALSTSLVIRKVPKYQNDAYSQCAVTVSHGLQNVTRTQ
GEGGWKVPQGVSKEAGPLEDAEEEPPPFKADSPAEASLASDPHEPPTTSFCPNCIRLKRK
VRELQAELDMLKSGALPEPPALPARALELPEFPDPAASESMVSGPAIMEDDDQEVDSADE
SVSNDMMTATDEPSKMSSATGRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCRQYTVQSS
RTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCRNMTLLFNTAYHLA
LEGRPYLDFRPLAELLRKCELKVVDQYMNEGDCQILIHHIARALREDLVERIRQSPCLSI
ILDGQSDDLLADTVAVYVQYTSSDGPPATEFLSLQELGFSSTESYLQALDRAFSALGIRL
QDEKPTVGLGIDGANVTASLRASMFMTIRKTLPWLLCLPFMVHRPHLEILDAISGKELPC
LEELENNLKQLLSFYRYSPRLMCELRSTASTLCEETEFLGDIRAVRWIIGEQNVLNALIK
DYLEVVAHLKDVSSQTQRADASAIALALLQFLMDYQSIKLIYFLLDVIAVLSRLAYVFQG
EYLLVSQVDDKLEEAIQEISRLADSPGEYLQEFEENFRESFNGISMKNLRVAEAKFQSIR
EKICQKTQVILAQRFDSRSRIFVKACQVFDLAAWPRNSEEFMSYGKEDMVQIFDHLEAIP
TFSRDVCREGLDPRGSLLMEWRELKADYYTKNGFKDLIGHICKYKQRFPLLNKIIQVIKV
LPTSTACCEKGRNALQRVRKNHRSRLTLEQLSDLLTIAVNGPPIANFDAKRALDSWFEEK
SGNSYTLSAEVLSRMSALEQKPVVQTVDHGSEFYPDI
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaacatgaaggagtgcttggcgcagaccaaggcagccgtgggggagatggtg
acggtggtgaagacagaggtctgctcaccgctccgcgaccaggagtatggccaaccctgc
tctaggagaccagacccctccgccatggaagtggagcccaggaaactgaaggggaagcgt
gacctcatcatgcccaaaagctttcagcaagtggacttctggttctgcgagtcctgccag
gagtactttgtggatgagtgcccgaaccatggtcccccggtgtttgtgtccgacacgccg
gtgcctgtgggcatcccagaccgggcggccctcaccatcccccagggcatggaggtggtc
aaggaagccagtggggagaatgacgtgcgttgcataaatgaggtcatccccaagggccac
atcttcggcccctatgaggggcagatctccacccaggacaaatcagctggcttcttctcg
tggctgattgtggacaagaacaaccgctacaagtccgttgatgggtcagatgagactaaa
gccaactggatgaggtacgtggtcatctcccgggaggagagggagcagaacctgctggcg
ttccagcacagcgagtgcatctacttccgggcgtgccgggacatccggcccggggagcgg
ctgcgggtctggtacagcgaagactacatgaagcgtctgcacagcatgtcccaagagacc
atccaccgcaacctggccagaggagagaagaaattgcagagggagaagtctgagcaggct
ctggataacccagaagacctgaggggtcccctgcagctccccgtgttgagacagggcaaa
agtccctacaagcgtggctttgacgagggggatgtgcacccccaggccaagaagaagaaa
atcgacctcattttcaaggatgtgttggaggcctcactggaatctgcaaaggtagaagcc
caccagctggcgctgagcacctcgctggtcatcaggaaggtccccaagtaccagaacgac
gcctacagtcagtgtgcagtgaccgtgtcacatggcctgcagaatgtcacccggacccaa
ggagaaggaggctggaaggtcccccaaggggtctccaaggaggcaggcccactggaggac
gcagaggaggagcctccgccgttcaaggccgacagtcccgccgaggcctcccttgcctcc
gaccctcacgagccgcccaccacctccttttgcccaaactgtattcgcctaaagaggaag
gttcgggaactccaggccgagctagacatgcttaagtccggcgcgcttcctgagcccccc
gccttgccggcacgggcactggagctccccgagttcccagaccccgcagcctcagagagc
atggtctccggccctgccatcatggaggacgacgaccaggaggtcgattcggcagacgaa
tccgtctccaacgatatgatgacggccaccgatgagccctccaagatgtcgtcggccacc
gggcgccgaatccggcgcttcaagcaggagtggctgaagaaattctggttcctgcggtac
tccccgaccctcaacgagatgtggtgccacgtctgccgccagtacacggtgcagtcctcc
cgtacctcggccttcatcatcggctccaagcagttcaagattcacaccatcaagctgcac
agccaaagcaacctgcacaagaagtgcctgcagctgtacaagctccgcatgcaccccgag
aagacggaagagatgtgtcgcaacatgacgctgctcttcaacaccgcctaccacctggcc
ctggagggcaggccctacctggacttccggcccctggccgagctgctgcggaagtgcgag
ctcaaggtggtggaccagtacatgaacgagggagactgccagatcctcatccatcacatc
gcccgggcgctgcgcgaagacctggtggagcgcatccgccagtcaccgtgcctcagcatc
atcctggatggacagagcgacgacctgctggctgacacagtggcggtctatgtccaatac
accagcagcgacgggcccccggccacggagttcctgtccctgcaggaactggggttctcc
agcacagagagctatctccaggcgcttgaccgggccttttccgccttgggcattcggctg
caggatgagaagcccaccgttggcttgggcatagacggggccaacgtcacagccagcctg
cgggccagcatgttcatgacgatccgcaagacactgccctggctgctgtgcctgcccttc
atggtgcaccggccccacctggagatcctggatgccatcagtgggaaggagctcccctgc
ctggaggagctggaaaacaacctgaagcagctgctgagtttctaccgttactcgccacgc
ctcatgtgcgagctgcggtccacagcgtccaccctctgcgaggagacggagttcctaggg
gacatccgggctgtgaggtggatcatcggggagcagaacgtcctcaatgccctcatcaag
gactacctggaggtggtggcccacctcaaggatgtcagcagccagacccagagggcggat
gcctcggccattgcgctggccctgctgcagttcctcatggactaccaatccatcaagctc
atctacttcctcctggacgtgattgccgtgctgtcacgcctggcctacgtcttccagggc
gagtacctcctggtgtcccaggtggatgacaagctcgaggaggccatccaggagatcagc
cggctggccgactctccgggggagtacctgcaggagttcgaggagaacttccgggagagc
ttcaacgggatctccatgaagaacctcagggtggccgaagccaagttccagtccatccgg
gagaagatctgccagaagacccaagtgatcctggctcagaggttcgattcccgcagccgg
atcttcgtgaaggcctgccaggtgtttgatctggccgcctggcccaggaacagcgaggag
ttcatgagctacggcaaggaggacatggtgcagatctttgatcacctggaggccatcccc
accttttcccgggatgtctgcagggaagggctggacccccgggggagtctgctgatggag
tggcgggaactcaaggctgattactacaccaaaaacggcttcaaagacctgatcggccac
atttgcaaatacaagcagaggtttccactcttgaacaagatcatccaggtcatcaaagtc
ctccccacctccaccgcttgctgcgagaaaggccgaaacgccctgcagcgagtccgcaaa
aaccaccgctcccgcctgactctggagcagctcagcgacctgttgaccatcgctgtcaat
ggccctccgatcgccaactttgatgccaagcgagccctggacagctggttcgaggagaag
tctggcaacagttacacactgtcggccgaggtcctcagcaggatgtctgcgctggaacag
aagccagtggtccagaccgtggaccacgggtcagagttttacccggatatttag
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