KEGG   Lipotes vexillifer (Yangtze River dolphin): 103089801
Entry
103089801         CDS       T03090                                 
Symbol
BCAS2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103089801 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lve03041]
    103089801 (BCAS2)
   03400 DNA repair and recombination proteins [BR:lve03400]
    103089801 (BCAS2)
Spliceosome [BR:lve03041]
 Complex B
  Other components
   Prp19 complex
    103089801 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    103089801 (BCAS2)
DNA repair and recombination proteins [BR:lve03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    103089801 (BCAS2)
SSDB
Motif
Pfam: BCAS2 HAUS2 THOC7 Tup_N Transcrip_act OmpH Ribosomal_L29 INO80F Relaxase_C Beta-prop_NUP159_NUP214 DUF3450 PRKG1_interact
Other DBs
NCBI-GeneID: 103089801
NCBI-ProteinID: XP_007462543
UniProt: A0A340XM93
LinkDB
Position
Unknown
AA seq 225 aa
MAGTGLVAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSA
FETDIMRNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLRE
MESTWVSLVSKNYEIERTIVQLENELFQMKQQHGEANKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcggggacgggtttggtggccggagaggttgtggtggatgcgctgccgtattttgac
caaggttatgaagcgcctggtgtgcgggaagcggctgcggcattggtggaggaggaaaca
cgcagataccgacctaccaagaactacctgagctacctgacagccccggattattccgct
tttgaaaccgacataatgagaaatgaatttgaaagattggctgctcgacaaccaattgaa
ttgctcagtatgaaacgatatgaacttccagccccttcctcgggtcagaaaaatgacatt
actgcgtggcaagaatgcgtaaacaattctatggcccagttagagcatcaagcggttcga
attgagaatctggaactaatgtcacagcatggatgcaatgcctggaaagtgtataatgaa
aatctagttcatatgattgaacatgcacagaaagagctccagaagttaaggaaacatatt
caggacttaaactggcagcgaaagaacatgcaactcacagctggatctaaattaagagaa
atggagtcaacttgggtttccctggtcagtaagaattatgagattgaaaggactattgta
caattagaaaatgaactctttcaaatgaagcagcaacatggagaggcaaacaaagaaaac
atacggcaagacttctga

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