Lipotes vexillifer (Yangtze River dolphin): 103090163
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Entry
103090163 CDS
T03090
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04612
Antigen processing and presentation
lve05145
Toxoplasmosis
lve05152
Tuberculosis
lve05164
Influenza A
lve05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
103090163 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
103090163 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
103090163 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
103090163 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
103090163 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lve01001
]
103090163 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lve04054
]
103090163 (CIITA)
Enzymes [BR:
lve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
103090163 (CIITA)
Protein kinases [BR:
lve01001
]
Serine/threonine kinases: Other
TAF1 family
103090163 (CIITA)
Pattern recognition receptors [BR:
lve04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
103090163 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
103090163
NCBI-ProteinID:
XP_007462893
UniProt:
A0A340XN92
LinkDB
All DBs
Position
Unknown
AA seq
1109 aa
AA seq
DB search
MALGPLEGGYLELLNSNADPLQLYHLYDRVDLAGEEELELCSEPDTDTINCEQFSRLLCD
MEGDEETREAYANIAELDQYVFQDSQLEGLSKDIFIEHIGLEEMISESVEVLEEAGQKSQ
KRPFPEELPVDLKHRKLAEPLAMPVVTGAFLVGLVSDSSAQPCPSPPALFNKEPASSQTQ
LKDTGMLGVPPSSSLLSCLSLPAGPIQIIPTLSTLPQGFWQISGAGTGVSSILIYQGEMP
QASQTPASSSTAVHSLPKSPDRPGSTSPFAPSAADLPSMPEPALTSRTNLTEDEMSPTQC
PAAHVASSKLPKWPESVEQFYCSLRNKYQAKPAGPEGILVEVDLVRVRLERSCGKSQDRE
LTTPDWAERQPARGSLGEVLLASSHHRRPRETQVIAVLGKAGQGKSHWVQAVSWAWACGQ
LPQYDFIFCIPCHCLDRPGDTYRLQDLLFFLGSQPLSVDDEVFSYILRRPDRILLILDGF
EELEAQDGFLHSAGGPMSAEARSLRGLLAGLFQRKLLSGCTLLLTARPRGRLAQSLSKAD
ALFEVAGFSAQQAETYVMRYFECSGTTEHQKRALALLQSQPFLLSHSHSPTVCRAVCQLL
EALLELGDEAQLPSTLTGLYVGLLGPGARDSPPGALVGLARLAWELGRGHHSSLREGQFP
SAEVRVWAVAQGLVRPTPGAPETKLAFSSFLLQCFLGAVWLALSSEIKDKELPQYLALTP
RKKRPYDNWLEGVPRFLVGLVFQPRACCLGALAGLAGSTSADRKQKVLTRYLKRLQPGTL
KAGRLLELLHCAHEALDAGLWQHVLQGLPAHLSFLGTRLTPPDTHVLGSALEAAGRDFSL
DLRSTGVDPSGLGSLVGLSCVTHFRAALSDTVELWESLQQHGEAKLLRAVKEKFTIEPFK
AESMKDVEDLGNLVQIQRTRSSSEDTPGELPAVRDLKKLEFALGPILGPQAFPKLVKILE
AFSSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLNLSQNNITDLGACKLAEALPL
LAASLLRLSLYNNCICDVGAESLAHVLPDMVSLRVLDVQYNKFTAAGAQQLTASLRKCPH
VEKLAMWTPTIPFGVQEHLQQLDSRIILR
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggggcctctagaaggcgggtacctggagcttctcaacagcaatgctgaccct
ttgcagctctaccacctctatgaccgggtggacctggctggagaagaagagctagagctc
tgctcagaacctgatacggacaccatcaactgtgaacagttcagcaggctgctgtgtgat
atggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactggaccagtat
gtcttccaggactcccagctggagggcctgagcaaagacattttcatcgagcacatagga
ctggaagaaatgatcagcgagagtgtggaggtgctggaggaagcaggacagaaaagtcag
aaaagacccttcccagaggagctgcctgtggatctgaagcacaggaagctagctgagccc
ctagccatgcccgtggtgactggtgctttcctggtggggctagtgagcgactcctcggct
cagccctgcccgtcaccacctgctctgttcaacaaggagccagcatccagccagacccag
ctgaaggacaccggtatgttaggggtgcccccttccagttccttgttgagctgcctgagt
ctccctgctggacccatccagatcatccccactctctccactctgccccaggggttctgg
caaatctcaggggctgggacaggggtctccagtatactcatctaccaaggtgagatgccc
caggccagccaaacacccgcctccagcagcacagctgtccacagcctcccgaagtcccca
gaccggcccggctccaccagcccctttgccccatcggcagctgacctccccagcatgcct
gaaccagccctgacctcccgtacaaacctaacagaggatgagatgtcccccacccaatgc
ccagcagctcacgtggcctccagcaagctgcccaagtggcctgagagtgtggagcaattc
tactgctcgctacggaacaagtaccaggctaagcccgcaggcccggaaggcatcctggtg
gaggtggacctggtgagggtaaggctggagaggagctgcggcaaaagccaggacagagag
ctgaccaccccggactgggcagagcggcaaccggcccgaggaagtctgggcgaggtgctg
ctggcctctagccaccaccggcggccacgtgagacgcaggtgatcgccgtgctgggcaaa
gcaggacaggggaagagtcactgggtccaggccgtgagctgggcctgggcctgcggccag
ctgccacagtatgactttatcttctgcatcccctgccactgtttggaccgtccgggagac
acctaccgcctgcaggatctgctcttcttcctgggttcacagccactgtcagtggacgac
gaggtcttcagttacatcttgaggaggcccgaccgcattctgctcatcctggatggcttc
gaggagctcgaagcccaagacggcttcctgcacagcgcgggcggacccatgtcagcagaa
gcccgctccctccgggggctgctggcgggcctcttccagcgcaagctgctgagcggctgc
accctgctgcttacagcccggccccggggccgcctggcccagagcctgagcaaggccgat
gctctgttcgaagtggccggcttctccgcacagcaggccgagacctatgtgatgcgctac
tttgagtgttcggggaccaccgagcaccagaagagagccctggcgctcctccagtcccag
ccatttctcctgagtcacagccatagccccactgtgtgccgggccgtgtgccagctcttg
gaggccctcctggagctaggtgatgaggctcagctgccttccacactcacgggcctctat
gttggcttactaggcccaggagcccgtgacagccccccaggggccttggtgggactggcc
aggctggcctgggagctgggccgcggtcaccacagcagcctgcgggagggccagttccca
tcggccgaggtgagggtctgggctgtggcccaaggcttggtgcggcccaccccgggggcc
ccggagaccaagctggccttctccagcttcctcctgcaatgcttcctgggggccgtgtgg
ctggctctgagcagcgaaatcaaggacaaggagctgccgcagtacttggcattgaccccg
aggaagaagcggccctatgacaactggctggagggcgtgccacgctttctggtggggctg
gtcttccagccgcgtgcctgctgcctgggagccctggcagggctggcgggctccacctca
gcggacaggaagcagaaggtgctcaccaggtacctgaagcggctgcagcctgggacgctg
aaggcggggcggctgctggagctgctgcattgcgcccacgaggcgctggatgctgggctt
tggcagcatgtgctgcaggggctcccggcccacctctcgttcctgggcacccggctcaca
cctcccgacacccacgtgctgggcagtgccttggaggcggcgggccgagacttctccctg
gacctccgcagcactggcgttgacccctctggactggggagcctcgtgggactcagctgt
gtcacccatttcagggctgccttgagtgacacagtggagctgtgggagtccctacagcag
catggggaggccaagctactccgagcagtgaaggagaagttcaccattgagcctttcaag
gctgaatccatgaaggatgtggaagacctgggcaacctcgtgcagatccagaggacaaga
agttcctctgaagacactcctggggaactccctgccgtccgagacttaaagaagctggag
tttgcgctgggccccatcttgggccctcaggcttttcccaagctggtgaagatccttgag
gccttttcttcccttcagcatctggacctggactcgctgagcgagaacaagatcggggat
gagggtgtcgcccagctctcggccaccttccctcagctgaaggccctggagacgcttaat
ttgtcccagaacaatattactgacttgggtgcctgcaagctggccgaggccctgcccttg
ctggctgcgtccctcctcaggctgagcttgtacaataactgcatctgcgacgtgggagcc
gagagccttgcacacgtgcttccagacatggtgtctctccgggtgctggatgtccagtac
aacaagttcacagctgccggggcccagcagctcactgccagcctgagaaagtgccctcat
gtggagaagctggcgatgtggacacccaccatcccttttggcgtccaggaacacctgcag
cagctggactcaaggatcatcctgagatga
DBGET
integrated database retrieval system
