Lipotes vexillifer (Yangtze River dolphin): 103090385
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Entry
103090385 CDS
T03090
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lve04515
]
103090385 (PCDH12)
Cell adhesion molecules [BR:
lve04515
]
Cadherins
Protocadherins
103090385 (PCDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
NNH1
Motif
Other DBs
NCBI-GeneID:
103090385
NCBI-ProteinID:
XP_007453764
UniProt:
A0A340X398
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MMRLLPLLLGLWGPGGYLFLSGDCQEVATLTVKYQVSEEVPSGTVIGKLSQELGREERSG
GAGAAFQVLQLPQALPIQVDSKDGLLSTGRRLDREQLCRQQDPCLVSFDVLATGDLALIH
VEIQVLDINDHQPQFPKGEQELEISESASLRTRIPLDRALDPDTGPNTLHSYTLSPSEHF
ALDVIVGPDETKHAELVVVKELDREIHSFFDLVLTAYDSGNPPKSGTSLVKVNVLDSNDN
SPVFAESSLALEIQEDAAPGALLINLTATDPDQGPNGEVEYFLSKHVPPEVLDTFSIDAK
TGQVILRQPLDYEKNPAYEVDVQARDLGPNPIPAHCKILIKVLDVNDNTPNIHITWASQP
SLVSEALPKDSFIALIMANDLDSGNNGLVHCWLSQELGHFRLKRTNGNTYMLLTNATLDR
EQWPQYTLTLLAQDQGPRPLSVEKQLSIQISDANDNAPVFEKSRYQVSTRENNLPSLHLI
TIKAHDADLGVNGKISYHIQDSPVSHLVAIDSDTGEVTAQRSLDYEQMAGFEFLVIAEDR
GQPQLASSVSVWVSLLDANDNAPEVIHPILSDGKASLSVLVNASTGHLLVPIETPNGVGP
AGTDMPPQATPSSRPFLLVTVVARDADSGANGELLYSIQSGNEAGLFVLSPHLGQLFINI
TNASSLTGSEWELEIVVEDRGSPSLQTRALLRVFFVTSVDHLRDSAREPGALSTSVLTVI
CLVVLLAVSGLTLALIMSICRTDKDNRAYNCREAECTYRHQPKRPQKHIQKADIHLVPVL
RGQVDEPGEAGQPPKHVGKEAMMEAGWDPCLQAPFHLTPTLYRTLRNQGNQGTLAESREV
LQDTVNLLFNHPRQRNASRENLNLPEPQPATGQPRSRPLKVAGSPTGRVPGDQGSKEAPL
SPPASSATLRRQRNLHGKVAPEKESGPRQILRSLVRLSVAAFAERNPVEELTVDSPPVQQ
ISQLLSLLHQGQFQPKPNHRGNKYLAKPGGSRSAIPDTDGPGARAGGQAEPDQEEGPLDP
EEDLSVKQLLEEELSNLLDPYTGLALDRLSVPDPAWMARLSLPLATNYRDNVFSPDAATS
EEPRTFQTFGKAPGPELSPTGTRLASTFLSEMSSLLEMLLEQRPAVPVEAASEVLRRLSV
CGRTLSLDLATSGASGSEGPGGRARKKGAEGRTSSGSSSRGLWIQEPGAPGDVRKPRP
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgacttctgccacttctgctgggactttgggggccaggtggctacttgttcctt
tcaggggattgtcaggaggtcgccactctcactgtgaaatatcaagtgtcagaggaagta
ccgtccggcacagtgatagggaagctgtctcaggaactgggccgggaggagaggtctggg
ggagcaggggctgccttccaggtcttgcagctgcctcaggcgctccccatccaggtggac
tccaaggacggcctgctcagcacagggaggcggctggaccgggagcagctttgccggcag
caggatccctgcctggtttcctttgacgtgcttgccacaggggatttggctctcatccac
gtggagatccaggtgctggacatcaatgaccaccagcctcagtttcccaaaggtgagcag
gagctggaaatctctgagagcgcctccctgcgcacccggatccccctggacagagctctg
gacccagacactggccccaacactctgcactcctacaccctgtctcccagcgagcatttt
gccctggatgtcattgtggggcccgatgagaccaaacacgcagaactcgtggtggtgaag
gagctggaccgggaaatccactcattttttgatctggtgttaactgcctatgacagtggg
aacccccccaagtcaggcaccagcttggtcaaggtcaatgtcctggactccaatgacaat
agccctgtgtttgctgagagctcactggcactggaaatccaagaagatgctgcccctggt
gctctcctcataaacttgactgccacagaccctgatcaaggccccaacggggaggtggaa
tacttcctcagtaagcatgtgcctccagaggtgctggacaccttcagtattgatgccaag
acaggccaggtgattctgcgtcaacccctagactatgagaagaatcctgcctacgaggtg
gatgtccaggcaagggacctgggtcccaatcccatcccagcccactgcaaaattctcatt
aaggttctggatgtcaatgacaacaccccaaacatccacatcacatgggcctcccaacca
tccctggtgtccgaagctcttcccaaggacagtttcattgctctcatcatggcaaatgac
ctagactcaggaaacaatggcctggtccactgttggctgagccaagagctgggccacttc
aggctgaaaaggaccaatggcaacacatacatgctgctaaccaatgccacgctggacaga
gagcagtggccgcaatataccctcactcttttggcccaagaccaaggaccccggccctta
tcagtcgagaaacagctcagcattcagatcagtgatgccaacgacaacgcacctgtgttt
gagaaaagcaggtaccaggtctccactcgggaaaacaacctaccctctcttcacctcatt
accatcaaggcccatgatgcagatctgggcgttaatgggaaaatctcataccacatccag
gactccccagtttctcacttggtagctattgactcagacacaggcgaggtcaccgctcag
aggtcattggactatgaacagatggccggctttgagttcctggtgatcgcagaggacagg
gggcagccccagcttgcatccagtgtctctgtgtgggtcagcctgctggatgccaatgat
aatgccccagaggtgattcaccccatactcagcgatgggaaagccagtctctcggtgctt
gtaaatgcctccacgggtcacctgctggtgcccattgaaactcccaatggcgtgggtcca
gcaggcactgacatgccaccacaggccacccccagctcccggccattccttttggtgacc
gttgtagcaagagatgcagactcgggggcaaatggagagctcctctacagcattcagagt
gggaacgaagccggtctcttcgtcctcagcccccacctggggcagctgttcatcaacatc
accaatgccagcagcctcactgggagtgagtgggagctggagatcgtggtggaagaccga
ggcagcccctccttacagacccgggccctgttgagggtcttcttcgtcaccagtgtggac
cacttgagggactcagcccgtgagcctggggccctgagcacgtcggtgctcacggtgatt
tgcctggtcgtactgctggccgtctccgggttgaccttggctctgattatgtccatttgc
cggacggacaaggacaacagggcctacaactgtcgggaggccgagtgcacctatcgtcac
cagcccaagaggccccagaaacacattcagaaggcggacatccacctcgtgcctgtgctc
aggggccaggtggatgagcctggcgaagccgggcagccccccaagcacgtgggcaaggaa
gcgatgatggaagcaggctgggacccctgcctgcaggccccctttcatctcacaccgacc
ctgtacaggactctgcgtaaccaaggtaaccagggaacgctggccgagagccgagaggtg
ctgcaggacactgtcaacctccttttcaaccatcccaggcagaggaatgcctcccgggag
aacctgaaccttcccgagccccaacctgcgacgggccagccccgctcaaggcccctgaag
gttgcgggcagccccacagggagggtgcctggggaccagggcagtaaggaggccccgctg
agcccgccagcctcctctgcaacgctgaggcggcagcggaatctccatggcaaagtagcc
cctgagaaagagtcaggcccccgtcagatcctgcggagcctggtccggctgtctgtggct
gcctttgcggagcggaaccccgtagaggagctcactgtggattcgcctcctgttcagcaa
atctcccagctgctgtccttgctgcatcagggccaattccagcccaaaccaaaccaccgg
ggaaataagtacttggccaagcccggcggcagcaggagtgcaatcccagacacagatggc
ccaggtgccagggctggtggccaggcagaaccggatcaggaggaagggcccttggaccct
gaggaggacctctctgtgaagcagctgctagaagaagagctgtcgaacctgctggacccc
tacacaggcctggccctggaccggctcagcgtccccgatccggcctggatggcaagactc
tctttgcccctcgccaccaactaccgtgacaacgtgttctccccggacgctgcgacctcg
gaggagcccaggaccttccagacgttcggcaaggcgccggggcccgagctgagcccgacg
ggcacgcggctggccagcaccttcctgtcggagatgagctcactgttggagatgctgctg
gagcagcgccccgccgtgccggtggaggccgcctccgaggtgctgcggcggctctccgtc
tgcggaaggaccctgagtctagacctagccaccagcggggcctcgggctcggaaggccct
gggggccgagctagaaagaagggggccgagggcaggaccagcagcggcagcagcagcagg
ggtctgtggatccaggaaccaggggccccgggagatgttaggaagcccaggccttga
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