Lipotes vexillifer (Yangtze River dolphin): 103090809
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Entry
103090809 CDS
T03090
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103090809 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lve03019
]
103090809 (SMG7)
Messenger RNA biogenesis [BR:
lve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
103090809 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
103090809 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
103090809
NCBI-ProteinID:
XP_007450199
UniProt:
A0A340WT23
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MRNWMFLQIVIVGENVSLKSQMRTGNLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWT
SRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANL
SLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYIC
QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCR
SIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSP
LREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQL
LALFMSFLGILCKCPLQNKSQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWP
WLISLLNSFHPHEEDLSSTNATPLPEEFELQGFLALRPSLRNLDFSKGHQGITGDKEGQQ
RQIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETTI
IESLAVDGNPGLKSVLSTGRNLSNNCDTGEKPVVTFKENIKPREVNRDQGRSFPPKEVRR
DCSKGITVTKNDGKKDNNKRKTETKKCTLEKLQETGKQNVAVQVKSQTELRRTPVSEARK
TPVTQAPSQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSV
PGTFLQPTAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQPQPPSQQPLTSLPAQP
TAQSTSQLQVQALAQQQQSPTKAVPALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLG
KIMPVKQPYYLQTQDPIKLFEPSVQAPVMQQQPLEKKMKPFPMEPYNHNSSEVKIPEFYW
DSSYSMADSRAVMAQQANMDRRGKRSPGVFRPEQDPVPRMPFEDPKGSPLLPPDLLKSLA
ALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSLNQ
ERYPNNSVFNEVYGKNLTTSSKAELNPSMAPQETSLYSLFEGTPWSPSLPASSDHSTPAS
QSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGIDYL
SATSSSESSWHQASTSSGSWTGHGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQ
QKQKQQRGQGTMNPPH
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattggatgttcttgcagatagtcattgtgggagaaaacgtttcacttaagtcc
cagatgaggaccggaaacttgaaatcagaggagcatctgaaatcaagtaatattaggcag
gcagaagtcctgaaggctgacatgacagattctaagctgggtccagccgaggtctggaca
tccaggcaggctctgcaggacctgtaccagaagatgctggttactgatttggaatatgct
ttagacaagaaagtagaacaggatctctggaatcatgcctttaagaatcagatcacaaca
ctacaaggccaggcaaagaatcgagcaaacccgaatcggagtgaagttcaggcaaacctt
tctctgttcctagaggcagctagtggcttctatactcagttattacaagaactgtgtaca
gtgtttaatgtagatttaccatgccgtgtgaagtcttcccaattgggaattatcagcaat
aaacagacgcataccagcgccatagtgaagccacagtctagctcctgttcctatatctgc
cagcactgcctcgtccaccttggagacattgctcgatacagaaaccagaccagccaggca
gagtcctactataggcatgcggctcagcttgtcccctctaatggtcagccttacaatcag
ttggctatcttagcttcttccaaaggagaccatctgaccacaattttctactactgcaga
agcattgctgtgaagttccctttcccagctgcctctactaatctacaaaaagcactttct
aaagcactggaaagccgggatgaggtgaaaaccaaatggggtgtttctgacttcatcaag
gcctttattaagttccatggtcatgtgtacctgagtaagagcttggaaaagttgagccct
cttcgagagaaattggaagaacagtttaagaggctgctattccaaaaagctttcaactct
cagcagttagttcacgtcactgtcattaacctgtttcaacttcatcaccttcgtgacttt
agcaatgaaacggaacagcatagttatagccaagatgaacagctgtgttggacacagttg
ctggccctctttatgtcttttcttggcatcctgtgcaagtgtcctctccagaacaagtct
caggaggaatcctacaatgcctatcccctacctgcagtcaaggtctccatggactggctg
agactcagacccagggtctttcaggaggcagtggtggatgaaagacagtacatttggcct
tggctaatttctcttctgaatagtttccatccccatgaagaggatctttcaagtactaat
gctacaccacttccagaggagtttgagttacaaggattcttggctttgagaccttctctc
aggaacttggatttttccaaaggccaccagggtattacaggagacaaagagggtcagcaa
agacaaatacgacagcagcgcttgatctctataggcaaatggatcgcagataatcagcca
aggctgattcagtgtgaaaatgaggtagggaaattgttgtttatcacagaaatcccagag
ttaatactggaagaccccagtgaagccaaagagaacctcattctgcaagaaacaaccatc
atagagtcactggctgtggatgggaacccaggactgaaatcagtgctgtcgacaggccga
aatctaagcaacaactgtgacacaggagagaaaccagtggtcaccttcaaagagaacatt
aagccacgagaagtgaacagagaccaaggaagaagttttcctcccaaagaggtgagaagg
gactgtagcaaaggaataactgtaactaagaatgatggaaagaaggacaacaacaagagg
aaaacagaaaccaagaaatgcaccttagaaaagttacaggaaacaggaaagcagaatgtg
gcagtgcaggtaaaatcccagacagaattaagaaggactccagtgtctgaagccaggaaa
acacctgtaactcaagccccaagtcaagcaagtaactcccagttcatacccattcatcac
cctggagccttccctcctcttcccagccggccagggttcccgcccccaacctatgttatc
ccccctcctgtggcattttctatgggctcaggttacaccttcccagctggtgtttctgtc
ccaggaacctttcttcagcctacagctcactctccagcaggaaaccaggtgcaagctggg
aaacagtcccacattccttatagccagcaacggccctctggaccagggccgatgaaccag
ggacctcaacaaccacagccaccttcccagcaaccccttacgtctttaccagctcagcca
acagcacagtctacaagccagttgcaggttcaggctctagctcagcagcaacaatcccct
acaaaagctgtgccggctttggggaaaagccctcctcaccactctggattccagcagtat
caacaggcagatgcctccaaacagctgtggaatccccctcaggttcaaggcccattaggg
aaaatcatgcctgtgaaacagccctactaccttcaaacccaagaccccataaaactgttt
gagccgtcagtgcaagctcctgtaatgcagcagcagcctctagagaaaaaaatgaagcct
tttcccatggagccatataaccataattcctcagaagtcaagatcccagaattctactgg
gattcttcctacagcatggctgatagcagagctgtaatggcacagcaagccaacatggac
cgcaggggcaaacggtcaccgggagtcttccgtccagagcaggatcctgtgcccaggatg
ccatttgaggaccccaagggctcccctctacttcctccggacctgttaaagagtctggct
gccttggaggaagaggaagagctgattttttctaaccctcctgatctttacccagctctg
ctggggcctctcgcctctcttcctggacgaagcctctttaaatccttattggagaagccc
tcagaactcatgtcacattcatcctctttcctgtcgctcaccggattctctctcaatcag
gaaagatacccaaataacagtgtgttcaatgaggtatatgggaagaacctgacaaccagc
tctaaagcagaacttaatccctcaatggccccccaggaaacatcattgtactcccttttt
gaagggactccatggtctccatcacttcctgccagttcagatcattcaacaccagccagc
cagtctcctcattcttccaacccaagcagcctgccaagctcccctccgacacacaaccac
aattctgtcccattctccaattttggacccattgggactccagataacagggataggaga
acggcagatcggtggaaaactgataagccagccatgggtgggtttggcattgattatctc
tcagcaacatcatcctctgagagcagttggcatcaggccagcacttcaagtggctcctgg
acaggccatggcccatccatggaggattcttctgctgtcctcatggaaagcctaaagtct
atctggtccagttccatgatgcatcctggaccttccgctttggagcagctgttaatgcag
cagaagcagaaacagcagcggggacaaggcaccatgaaccctccacactga
DBGET
integrated database retrieval system
