Lipotes vexillifer (Yangtze River dolphin): 103091113
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Entry
103091113 CDS
T03090
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103091113 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lve03032
]
103091113 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
lve03400
]
103091113 (TOPBP1)
DNA replication proteins [BR:
lve03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
103091113 (TOPBP1)
DNA repair and recombination proteins [BR:
lve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103091113 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
TopBP1_BRCT0
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
103091113
NCBI-ProteinID:
XP_007457624
UniProt:
A0A340XEI7
LinkDB
All DBs
Position
Unknown
AA seq
1471 aa
AA seq
DB search
MKENDRSLYICDPFSGKVFDHLKKLGCRIVGPQVVIFCMHHQRCVPRAEHPVYNMVMSDV
TISCTSLENDKREEVHKYVQMMGGRIYRDLNISVTHLIAGEVGSKKYLVAANLKKPILLP
SWVKTLWEKSQEKKIVRYTDIDMEDFKCPIFLGCIICVTGLRGLDRKAVQHLTVKHGGQY
MGQLKMNECTHLIVQEPKGQKYECARRWNVHCVTVQWFFDSVEKGFCQDESIYKTEPSPE
TKTMPDTSTPTGQINTTNSYTLSDVSHISNISASCINESICSSVLNSKVEPTLENLDVSA
FQAPEDLLDGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDFDDELKQF
WDKSAHRPHIVGAKWLLECFSKGNMLPEEPYIHANYQPVEIPVSDQPESKTTLLKRKKSS
LSKKDFAPNEKHEETDEDLLSQYATNNPTIVEVAQSEVGPFNDSAHVEPLIDSTHISLQE
ENQSSVSHCLPDASTVTEEGLFSQKSFLILGFSNENEFNIATIIRENAGKIVSLQSRVVA
DYAVVPLLGCEVQATVGEVVTNTWLVTCIDYQTLTDPKSNPLFTPVPVMAGMTPLEDCVL
SFSQCAGAEKDSLTFLANRLGASVQEFFVRKSNAKKGMFASTHLVLKEPGGSKYEAAKKW
NLPAVTIAWLLETARLGKRANESHFLIKNSPKEEQSLETETTNGVNLNPDTPEHPVTDLE
THRKTAVTPLDMNRFQSKAFRAVISQHSGQASVSLAAGQPLQKEPSLRLDTPSKFLSKDK
LFKPSFDVKDALAALETPGGPSQQKRKLGTPLSEVIVRNLKLALANSSRNTVALSASPQL
KDVRSEKEEAPKPLHKVVVCVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRP
NDTNREYKSVKERGIHIVSEHWLLECAQEYKHLPESFYPHTYNPKMSLDISAVQDGRLCN
NRLLSADLTTKDDEPDHLPVEENDIDSMTTSNKEPATSNGNGRNDSKGALTQTLEMRENF
QKQLQEIMSATSLVKPQGQRTSLSRSGCNSASSTPDSARSARSGRSRVLEALRQSRQTVP
DVNTEPSQNEQIIWDDPTAREERARLASNLQWPSCPTQYSELQADVKKLEDSPFQEPLHD
SEIAEQAVCDPENICVTEAPKHPISEELETPIKDSHLIPTPQAPSIAFPLANPPVAPHPR
EKIITIEETHEDLKKQYIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPNCTHIVVGH
PLRNEKYLASVAAGKWVLHRSYLEACRTAGRFMLEEDYEWGSSSILDVLTGISVQQRKLA
LAAMRWRKKIQQRQESGIIEGAFSGWKVILHVDQSREAGFKRLLQSGGAKVLPGHSVSLF
KEATHLFSDFNKLKPDDLGVNIAEAAAQNVYCLKTEYIADFLMQESPPQVENYCLPEAVS
FLQNNKEPGPGFSQKRKAPIEKNKIKRPRVQ
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaatgatagatcactttatatctgtgacccttttagtggcaaagtctttgat
catctcaaaaagcttggctgcagaattgttggtcctcaagtagtcatattttgtatgcac
caccaacgatgtgtcccaagagctgaacatccagtttataacatggttatgtctgatgta
accatatcttgtacaagcctggaaaatgataaaagggaagaagttcataaatatgtacaa
atgatgggtggacgcatatacagagaccttaacatatcagtaactcaccttattgcagga
gaagttggtagcaaaaagtatttagttgctgcaaacctgaagaaacctattttacttcct
tcttgggtgaaaacactttgggagaagtcacaagagaaaaaaatagttagatataccgat
atagacatggaagacttcaagtgtcctatttttcttggttgcataatctgtgtcactggc
ttacgtggcttagacaggaaagcagttcagcacctcacagttaagcatggaggtcaatat
atgggacagttgaaaatgaatgagtgtacacacctcattgtgcaagaaccaaaaggtcaa
aaatatgaatgtgccaggagatggaatgtacactgtgtgactgtgcagtggttttttgac
agtgttgagaaaggtttttgtcaggatgaatccatatataagacagagcctagtccagaa
acaaagactatgcctgatacttcaactcctactggccagatcaacacaactaatagttat
actctttcagatgtcagccatatttccaacatcagtgcaagttgcataaatgaatcgata
tgtagttcagttcttaatagcaaagtggagcctacacttgaaaatctggatgtcagtgca
tttcaggcacctgaagatttattagatggttgtcggatctatctttgcggttttagtggc
agaaagctagataaactgagaagacttattaacagtggaggtggagttcgctttaatcag
ctcaatgaagacgtaactcatgttattgtgggagattttgatgatgaattgaagcagttt
tgggataaatcagcccacaggcctcatatagtgggagcaaaatggttgctagagtgtttt
agtaaaggtaatatgcttcctgaagagccatatatccatgctaactaccagcccgtggaa
attccagtttcagaccaacctgaaagtaaaacaacccttttaaaaaggaagaagagcagc
ttatctaagaaagactttgctcctaatgaaaagcatgaggaaactgatgaagatctgctc
tctcaatatgcaactaataacccaaccatagttgaagttgcacagtctgaagttgggccc
tttaatgattctgctcatgtggagcccctcattgattctactcatatttctctgcaagaa
gaaaaccagtcttccgtcagtcattgcctccctgatgcttctacagttactgaagaaggt
ttatttagccaaaagagttttcttattttaggttttagtaatgaaaatgaatttaatatt
gcaactatcataagagaaaatgctggaaaaattgtgtcacttcagagcagagttgttgct
gattatgctgtggttcctctgctgggctgtgaagtacaggcaactgtgggagaagttgtt
acaaatacgtggctggtaacttgtatagactatcagactttaactgatccaaagtcaaat
cctctcttcacaccagtcccagtaatggcaggaatgactcctttagaagattgtgttctt
tcattcagccagtgtgcaggagctgaaaaagattcgttgacattcttagcaaatcgcctt
ggagcaagtgttcaagaattcttcgttcgcaaatccaatgcaaagaaaggcatgtttgcc
agtacacatcttgtattgaaagaaccaggtggttctaaatatgaagctgccaagaagtgg
aatttaccagcggtcactatagcttggctgttggagactgctagattgggaaagagagca
aatgaaagccattttctgatcaaaaattcacctaaagaagaacaaagtttggaaactgaa
acaacaaacggggtgaatctaaatccagatactccagagcatcctgtcacagacctggaa
actcacagaaaaacagccgttacacctttagatatgaatcgctttcagagtaaagctttc
cgtgcggtgatctcacagcactccggacaggcttcagtctcccttgcagcaggacaacca
cttcagaaggagccctcattacgcctggatacaccctcaaagtttctgtccaaggacaaa
ctcttcaagccttcctttgatgtgaaggatgcactcgcagccttggaaactccaggaggt
cccagccagcagaaaaggaaactgggtacaccactctcagaagtcattgtcagaaacttg
aaacttgctttggcaaatagctctcgaaatactgtcgctctttctgccagccctcaactg
aaagatgtccggtcagaaaaggaagaagctccaaagccacttcacaaggtagtggtatgt
gttagtaaaaaactcagtaagaagcagagtgaactaaatgggattgcagcctctctaggt
gcagactacaggtggagttttgatgagacagtgactcatttcatttatcaagggagacca
aatgacactaatcgggagtataaatctgtaaaagaaagaggaatacacattgtttcagag
cactggcttttagaatgtgcccaagagtataaacatcttcctgaatctttttatccacat
acttataatcccaaaatgagcttggatatcagtgcagtgcaagatggcagactttgtaat
aaccgactactctcagctgatttgacaacgaaggatgatgagccagatcatttgcccgta
gaagaaaatgatatagacagtatgactaccagtaataaagaaccagcaacatcaaatgga
aatggcaggaatgactctaaaggagctctgacacagaccttggagatgagagagaacttt
caaaagcagctacaggagataatgtctgcaacttcactagtgaaaccccaagggcagagg
acttccctttcaagaagtggttgtaacagtgcctcttcaacccctgacagcgctcgctct
gcccgcagcggacgaagtagagtcctagaggcactgaggcagtctcgtcaaacagtacct
gatgtcaacacagagccctcccaaaatgaacagatcatttgggatgaccctacagccagg
gaagagagagcaagacttgccagcaatttgcaatggcctagttgtcccacacaatactct
gagcttcaggctgatgttaaaaaattggaggattctcctttccaggagcctttacatgat
tcagaaattgctgaacaggctgtctgtgatcctgagaacatatgtgtgactgaagcccca
aaacacccgatctctgaagaactggaaactccaataaaagacagccacctgatccctacg
cctcaagcccccagtattgccttccccctagccaacccacctgtggctccacaccctaga
gaaaagattataacgatagaggagactcacgaagacttaaaaaaacagtacatatttcag
ttgtcatctctgaatcctcaagaacgtattgattattgtcatctgattgaaaaactaggt
ggattagtgattgagaagcagtgctttgatcccaactgtacacacattgttgtgggacat
ccacttcgaaacgagaagtatttagcttcagtggcagctgggaagtgggtgctccatcgc
tcctaccttgaagcttgcaggactgctgggcgcttcatgctggaagaagactatgaatgg
ggaagtagttccatacttgatgttttgactggaatcagtgtacagcaacgaaaactagca
cttgcagcaatgagatggagaaagaaaatccagcaaagacaagaatcaggcattattgag
ggggcatttagtgggtggaaggttattttacatgtcgatcagtcccgagaagcaggattc
aaacgccttcttcagtcaggaggagcaaaggtgctacctggtcattctgtatctttattt
aaagaagctacacatctcttttctgactttaataaactaaaaccagatgacttgggagtt
aatatagcagaagctgctgcccagaatgtgtactgcttgaaaacggaatacattgctgat
tttcttatgcaggaatctcctcctcaagtagaaaattactgtctaccagaagctgtttca
tttcttcagaataataaggaacctgggcctggattctcacaaaagaggaaagctcctata
gagaaaaataaaatcaaacgacctagagtacagtaa
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integrated database retrieval system
