Lipotes vexillifer (Yangtze River dolphin): 103091256
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Entry
103091256 CDS
T03090
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lve04121
]
103091256 (RBBP6)
Enzymes [BR:
lve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103091256 (RBBP6)
Ubiquitin system [BR:
lve04121
]
Ubiquitin ligases (E3)
U-box type E3
103091256 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
103091256
NCBI-ProteinID:
XP_007450054
UniProt:
A0A340WSL6
LinkDB
All DBs
Position
Unknown
AA seq
1787 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPVNYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPPPPLPPPRPLIQRNLQPLMRS
PISRQQDPLMIPVTSSTHPAPSISSLTSNQSSLAPPVPGNPSSTPAPVPDITATVSISVH
SEKSDGPFRDSDNKILPAAALASEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQSLLH
GQLIPTTGPVRINTARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSER
SQRTQGPSLPANPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVPP
PGFPPAPANLSTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEF
TNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFSR
SHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQSP
NKRNVPQGETEREYFNRYREVPPPYDMKAYYGRSVDFRDPFEKERYREWERKYREWYEKY
YKGYAAGAQPRPSANRENFSPERFLPLNIRNSPFTRGRREEYSGGQSHRSRNIGGNYPEK
LSSRDSHNQKDNTKSKEKESENVSGDGKGNKHKKHRKRRKGEESEGFLNPELLETSRKSR
EPTSGEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKREKDKPKAKGDKTKR
KNDGSAVSKKETVAKPAKGPQEKLDGEREKSPRSEPPLKKAKEETPKTDNVKSSSSSQKD
EKIIGTPRKAHSKSVKEHQETKPVKEEKVKKDYSKDVKSEKLTSKEEKTKKPNDKSKPLD
SKGEKRKRKTEEKGGDKDFESSSVKISKLEVTEIVKPSPKRKMELDIEKLDRTPEKDKIS
SSTAPAKKIKLNRETGKKIGSTENISNTKEPSEKLESTSGKVKQEKIKGKVRRKVTGTEG
SSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPXXXXKWDKDDFESE
EEDVKSTTQPISSVGKPASVIKNVSTKPSNAVKYTEKENESSEKIQKLTKEVSHEITQHE
VKSSKNSASSEKGKTKDRDHSVLEKETPEKRKNSTQPEKDSNLDRLNEQGNFKSLSQSSK
ETRTSGKEDKHDSIRGSSNKDFTPNRDKKTDYDNREYSSSKRRDERNELTRRKDSPSRSK
DSAAGQKTKPREERDLPKKGTGDSKKSNSSPSRDKKPHDHKSTYDTKRSSEETKSVDKNP
CKDREKHVLEAKNNKESSGNKSLYILNPPDPQIEKEQVTGQIDKNTIKPKPQLSHSSRLS
SDLTRETDEAAFEPDYNESDSESNVSVKEEETSGKISKELKDKVVEKAKESLDIAAVSQG
GVTRSQSQSSPSVSPSRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHK
KHKKHAGTEVELEKSQKHKHKKKKSKKSKDKEKEKEKDDQKVKSVTV
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataaattttcctctaaactcaattatgataccgtcacctttgat
gggctccacatctccctctgcgatttaaagaagcagattatggggagagagaagctgaaa
gctgccgactgcgacctgcagatcaccaacgcgcagacgaaagaagaatatactgatgat
aatgctctaattcctaagaattcatctgtaattgttagaagaattcctattggaggtgtt
aaatctacaagcaagacatacgttataagtcgaactgaaccagtgatgggaacttcaaaa
gcaattgatgactcttctgcgtctatttctctggcccagcttacgaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccagtcaattacatgaagaaacctctaggtccaccacctccatcttatact
tgtttccgttgtggtaaacctggccattatattaagaattgcccaacaaatggggataag
aactttgaatctggtcctaggattaaaaagagcactggaattcccagaagttttatgatg
gaggtgaaagatcctaacatgaaaggtgcaatgcttaccaacactggaaaatatgcaata
ccaactatagatgcagaagcatatgcaattgggaaaaaagaaaaaccaccttttttacca
gaggaaccatcatcatcttcagaagaagatgatcctatcccagatgaattgttgtgtctc
atctgcaaagatatcatgactgatgctgttgtcattccatgctgtggaaatagttattgt
gatgaatgtataaggacagctctcttggaatcagatgaacatacatgtccaacatgtcat
cagaatgatgtgtctcctgatgctttaattgccaataagttcttacgacaggctgttaat
aacttcaaaaatgaaactggttatacgaaaagactaagaaaacagttacctccaccccca
cccccactaccacctccaagaccactcattcagcggaacctacaacctctgatgagatct
ccaatatcaagacaacaagatcctctgatgattccagtgacatcatcaactcacccggct
ccatccatatcttcattaacctctaatcagtcttccttggcccctcctgtgcctggaaat
ccatcttctaccccagcccctgtacctgatataactgcaacagtctccatatcagtgcac
tcagaaaaatcagatggaccttttcgggattctgataataaaatactgccagctgcagca
cttgcatctgaacattcaaagggagcctcttcaattgcaattactgcccttatggaagag
aagggttaccaggtgcctgtacttggaaccccatctttacttggacagtcattattgcat
ggacaattgatccccacaactggtccagtaagaataaacactgctcgtccaggtggtggt
cgaccaggttgggaacattccaacaagcttggatatctggtttctccaccacagcaaatt
agaagaggggagagaagctgctacagaagtataaaccgtggacgacaccacagcgaaaga
tcacagagaactcaaggcccatcactaccagcaaatccagtttttgtacctgtcccaccc
cctcccttgtatcctcctcctccccacacgcttcctctccctccaggtgttcctcctcca
cagttttctcctcagtttcctcctggccagccaccacctgctgggtatagtgttccccct
ccagggtttcctccagctccagccaatttatcaacaccttgggtatcatcaggagtacag
acagctcattcaaataccatcccaacaacacaagcaccacctttgtccagggaagaattc
tatagagagcaacgacgactaaaagaagaggaaaagaaaaagtccaagctagatgagttt
acaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtaggcgc
tcattttccaggtccaaatctccctatagtggttcatcctattcaagaagttcatatact
tactctaaatcaagatctggttcaacacgatcacgttcttattctcgatcgtttagccgc
tcacattctcgttcctattcacgatcgcctccataccccagaagaggcagaggaaagagt
cgaaattaccgttcacggtctagatcgcacgggtatcatcgatctaggtcaaggtcaccc
ccatatagacggtatcattcacgatcaagatctcctcaagcatttaggggacagtctcct
aataaacgtaatgtacctcaaggagaaacagaacgtgaatattttaacaggtacagagaa
gttccaccaccttatgacatgaaagcttattatgggaggagtgttgacttcagagaccca
tttgaaaaagaacgttaccgagaatgggagagaaaatacagagagtggtatgaaaaatat
tataaaggctatgctgctggagcacagcctagaccatcagcaaatagagagaacttttct
ccagagagatttttaccacttaatatcaggaattctcccttcacaagaggccgcagagag
gagtactctggtggacagagtcatagaagtcgaaacataggtggcaactatccagaaaag
ctttcatcaagagacagtcacaatcagaaggataatacaaagtcaaaagagaaggagagt
gaaaatgtttcaggagatggcaaaggaaataaacataagaaacacagaaaaagaagaaag
ggggaagaaagtgaaggctttctaaacccagagttattagaaacttctaggaaatcaaga
gagccaacaagtggtgaagaaaataaaacagactcattgtttgttctcccaagtagagat
gatgctacacctgttagagatgaaccaatggatgctgaatccattacttttaaatcagtg
tctgaaaaagacaagagagaaaaagataaacctaaagcaaaaggtgacaagaccaaacgg
aaaaatgatggatctgctgtgtccaaaaaagaaactgttgcaaaacctgctaaaggacct
caagaaaaactagatggagagcgtgaaaaatctcctcgatctgaacctccacttaaaaaa
gccaaagaggagactccaaagactgacaatgtgaagtcatcatcttcctctcaaaaagat
gaaaagatcattggtacccccagaaaagctcactctaagtcagtaaaggaacaccaggag
acaaaaccagtcaaagaggaaaaagtgaagaaggactactccaaagacgtcaagtcagag
aagctaactagtaaggaagaaaagaccaagaagcctaatgataagagtaaaccacttgat
agcaagggagaaaaaagaaaaagaaaaactgaagagaaaggtggagataaagattttgag
tcatcttcagtgaaaatctctaaattagaagtaactgaaatagtcaaaccatcaccaaag
cgcaaaatggaacttgatattgaaaagctggataggacgcctgaaaaagacaaaatttca
tcatcaactgctccagccaaaaaaatcaagcttaacagagaaactggtaaaaaaattgga
agtacagaaaatatatctaatacaaaagaaccctctgaaaaattggagtcaacatctggc
aaagttaaacaagaaaaaatcaaaggaaaggtcaggcgaaaagtgactggaactgaagga
tccagctcaacacttgtggattataccagtaccagttcgactggaggcagtcctgtgcgg
aaatctgaagaaaaaacagatacaaagcgaactgtcattaaaacaatggaagaatataat
aatgataacacagctcctnnnnnnnnnnccaaatgggataaagatgactttgaatctgaa
gaagaagatgttaaatccaccacacagcctatatcaagtgtaggaaaacctgccagtgtt
ataaaaaatgttagcactaaaccatccaatgcagtcaaatatactgagaaagaaaatgag
tcatcagagaaaattcagaaactcaccaaggaagtgagccatgaaattacacagcatgag
gtcaaaagttcaaaaaactctgcatctagtgaaaaagggaaaaccaaagatcgagatcat
tcagtgttggaaaaggaaaccccagaaaagaggaagaacagcactcagccagagaaagat
agtaatctggaccgtctgaatgagcaaggaaattttaaaagtctgtctcaatcttccaaa
gagactagaacttctggcaaagaagataagcatgattccattcgaggttcctcaaataaa
gacttcactcccaacagagacaaaaaaactgattatgacaacagagagtattcaagttcc
aaacgtagagatgaaaggaatgaattaacaagaagaaaagactctccttctcgcagtaaa
gactctgcagctggacaaaaaactaagccaagggaggagagagatttgcctaaaaaagga
acaggagattccaaaaaaagtaactctagtccctcaagagacaaaaaacctcatgatcat
aaatccacttatgatactaaacgttcaagtgaagagacgaaatctgtagataaaaatccc
tgtaaagatcgtgagaaacatgtgttagaggcaaagaacaataaagagtcaagtggcaat
aaatcactgtatatacttaacccaccggacccacagatcgagaaggagcaagttactggg
caaattgataagaacaccatcaagcctaaaccccagttaagtcattcctctcgactgtcc
tctgacttaactagagaaactgatgaagctgcttttgaaccagattataatgaaagtgac
agtgaaagcaatgtatctgtaaaagaggaagaaacttcagggaaaatttctaaggaactg
aaagataaagtagtggagaaagcaaaagagagcctggacatagcagcagtcagccaggga
ggtgtaaccaggagccagagtcaaagcagccctagtgtcagtccaagtagaagtcatagc
ccttctggaagccaaacccgaagccacagtagcagtgctagctctgcagaaagtcaggac
agcaagaagaagaagaagaagaaagaaaagaaaaagcacaagaaacataagaagcataag
aagcataagaaacatgcaggcaccgaagtagaattggaaaaaagccaaaaacacaaacat
aagaaaaagaagtcaaagaagagcaaagataaagaaaaggagaaggagaaggatgaccaa
aaagtgaaatctgtcactgtgtaa
DBGET
integrated database retrieval system
