Lipotes vexillifer (Yangtze River dolphin): 103091601
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Entry
103091601 CDS
T03090
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04517
IgSF CAM signaling
lve04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
103091601 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103091601 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lve04812
]
103091601 (SPTBN1)
Cytoskeleton proteins [BR:
lve04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
103091601 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
103091601 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
103091601
NCBI-ProteinID:
XP_007465745
UniProt:
A0A340Y2V4
LinkDB
All DBs
Position
Unknown
AA seq
2365 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRIAARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIGIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVVRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIA
YIREQWAHLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIANYRPTIDSLHEQAGALPQEHAESPDVQGRLAGIEERYKEVAELTRL
RKQALQDTLALYKMFSEAGACELWIDEKEQWLDNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNISSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
RAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSXXXXTLLKKQQMLENQMEVRKKEIEE
LQSQAQALSQEGKSTDEVDSKRLTVQTKFMALLEPLNERKQNLLASREIHQFNRDVEDEI
LWVGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIVTDSSLN
AEAIRQRLADLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSAVSMLKKHQILEQAVEDYADTVHQLSKTSRALVADSHPESERISMRQSKVDKL
YAGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQ
ILAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAARLQAAYAGDKAEDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSM
VRDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLA
RKHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPY
LSSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRR
PPSPEPSSKVSEETESQQQWDASKGEQVSQNGLPAEQGSPRMAETVDTSEMVNGAAEQRT
SSKESSPIPSPTSERKAKTALPAQSAATLPARTQETPLAQMEGFLNRKHEWEAHNKKASS
RSWHNVYCVINNQEMGFYKDAKTAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRL
NDGNEYLFQAKDDEEMNTWIQAISSAISSDKHEVSASTQSTPASSRAQTLPTSVVTITSE
SSPGKREKDKEKDKEKRFSLFGKKK
NT seq
7098 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacagtagccacagactacgacaacatcgagatccaacagcagtacagcgat
gtcaacaaccgctgggacgtggacgactgggacaacgagaacagctccgcgcggctcttt
gagcggtcccgcatcaaggctctggcagatgaacgtgaagccgtgcagaagaagaccttc
accaagtgggtcaactcccacctcgcccgggtgtcctgccggatcacagacctgtacact
gaccttcgggatggacggatgctcatcaagctgctggaggtcctctccggagagagactg
cctaaacccaccaagggacgaatgcgcatccactgtctggagaacgtggacaaggccctt
cagttcctgaaggagcagagagtccatcttgagaacatggggtcccacgacatcgtggat
gggaaccaccggctgaccctcggccttatctggaccatcatcctgcgcttccagatccag
gatatcagcgtggaaactgaagacaacaaagagaagaaatctgccaaggatgcattgctc
ttgtggtgccagatgaagacagctgggtaccccaacgtcaacattcacaatttcaccact
agctggagagacggcatggccttcaatgcactgatacacaaacaccggcctgacctgata
gattttgacaagctaaagaaatccaatgcacactacaatctgcagaatgcatttaacctt
gcagagcagcacctcggcctcactaaactgttggaccccgaagatatcagtgtggaccac
cccgatgagaagtccattatcacttatgtggtgacttattaccactacttctcaaagatg
aaggccttggctgttgaaggaaaacgaattggaaaggtgctcgacaatgctattgaaaca
gaaaaaatgattgaaaagtatgaatcccttgcctctgaccttctggagtggattgaacaa
accatcatcattttgaacaaccgcaaatttgccaactcgctggttggggttcaacaacag
cttcaggccttcaacacctaccgcactgtggagaagccgcccaaatttactgagaagggg
aacttggaagtcctgcttttcactattcagagcaagatgagggccaataaccagaaggtc
tacatgccccgggaggggaagctcatctcggacattaacaaggcctgggaaagactggaa
aaagcggaacatgagcgagaactggccctgcggaacgagctcataagacaggagaaactg
gaacagctcgcccgcagatttgaccgcaaggcagctatgagggagacctggctgagcgag
aaccagcgtctggtgtcccaggacaactttggatttgaccttcccgcagtcgaggctgcc
acgaaaaagcacgaggcaattgagacggacattgccgcgtacgaggagcgcgtgcaggcc
gtggtggccgtggccagggagctggaagcggagaactaccacgacatcaagcgcatcgcg
gcgaggaaggacaacgtcatccggctctgggagtacctgctggagctgctcagggcccgg
cggcagcgcctcgagatgaacctggggctgcagaagatattccaggaaatgctctacatt
atggactggatggatgaaatgaaggtgctattattgtctcaggactatggcaaacacttg
ctcggcgtggaagacctgttacagaagcacgccctggttgaagcggacattggcatccag
gcagagcgggtgagaggtgtcaatgcctctgcccagaagtttgcaacagacggggaaggt
tacaagccgtgcgacccccaggtgatccgagaccgcgtggcccacatggagttctgttat
caagagctttgccagctggcggccgagcgccgggcccgcctggaagagtcccgtcgcctc
tggaagttcttctgggagatggccgaggaggagggctggatccgggagaaggagaagatc
ctgtcctccgacgactacggcaaggacctcaccagcgtcgtgcggctgctcagcaagcac
cgggcgttcgaggatgagatgagcggccgcagcggccacttcgagcaggccatcaaggag
ggcgaagacatgatcgccgaggagcactttgggtcggagaagatccgggagcggatcgcc
tacattcgcgagcagtgggcccacctggagcagctctcggccatccgcaagaagcgcctg
gaggaggcctcgctgctgcatcagttccaggcggacgccgacgacatcgacgcctggatg
ctggacatcctcaagatcgtctccagcaacgacgtgggccacgacgagtactccacccag
tccctggtcaagaagcacaaggacgtggcagaggagatcgccaactaccggcccaccatc
gactcgctgcacgagcaggccggcgccctcccccaggagcacgccgagtctcccgacgtg
cagggccggctggcgggcatcgaggagcgctacaaggaggtggccgagctgacgcggctg
cggaagcaggcgctgcaggacaccctggccctgtacaagatgttcagcgaggccggggcc
tgcgagctctggatcgacgagaaggagcagtggctcgacaacatgcagatcccagagaag
ctggaggacctggaggtcatccagcacagattcgagagcctagagccagagatgaacaac
caggcttcccgggtggcggtggtgaaccagatcgctcggcagctgatgcacagcggccac
ccgagtgagaaggagatcaaggcccagcaggacaagctcaacacgaggtggagtcagttc
agggagctggtggaccggaagaaggacgctctcctctccgccctgagcatccagaactac
cacctcgagtgcaacgaaaccaagtcctggattcgggaaaagaccaaggtcatcgaatcc
acccaggacctgggcaacgacctggcgggagtcatggccctgcagcgcaagctgaccggc
atggagcgggacctggtggccatcgaggcaaagctgagcgacctgcagaaggaggccgag
aagctggagtctgagcaccccgaccaggcccaggccatcctgtctcggctggccgagatc
agcgacgtgtgggaggagatgaagaccacgctgaagaaccgcgaggcctccttgggagag
gccagcaagctgcagcagttcctgcgggacctggacgacttccagtcctggctctccagg
acccagacggccatcgcctcggaggacatgcccaacaccctgaccgaggccgagaagctc
ctcacgcagcacgagaacatcaaaaacgagatcgacaactatgaggaggactaccagaag
atgagggacatgggcgagatggtcacccagggccagaccgacgcccagtacatgttcttg
cggcagcggctgcaggccctggacactgggtggaatgagctccacaagatgtgggagaac
aggcagaaccttctctcccagtcccacgcctaccagcagttcctgcgggacacgaagcag
gccgaagccttcctgaacaaccaggagtatgttttggcccatactgaaatgcccaccacc
ttggaaggagctgaagcagctattaaaaaacaagaggacttcatgaccaccatggacgcc
aacgaggagaagatcaatgcggtcgtggagacgggccggaggctggtgagcgatgggaac
atcagttcggaccgcatccaggagaaggtggactctatcgatgacagacataggaagaat
cgtgaggcagccagtgagcttctgatgagactgaaggacaacagggatcttcagaaattc
ctgcaagattgtcaggagctgtctctctggatcaatgaaaagatgcttacagcccaggac
atgtcttatgatgaagccagaaatctgcacagtaaatggttaaaacatcaagcctttatg
gcagaactcgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctc
atttcagaaaagccagagacggaagccgtggtgaaggagaaactcacaggtttacataaa
atgtgggaagtccttgagtctaccacacagaccaaggcccagcggctcttcgacgcaaac
agagctgaactcttcacccagagctgtgcagatctggacaaatggctgcacggcctggag
agtcagattcaatctgatgactatggcaaagacctcaccagtgnnnnnnnnnncaccctg
ctgaaaaagcaacagatgctggagaatcagatggaggtgcggaagaaggagatcgaagag
ctccagagccaggcgcaggccctgagccaggaggggaagagcacggacgaggtggacagc
aagcgcctcaccgtgcagaccaagttcatggcgctgctggagcccctgaacgagaggaag
cagaacctgctggcctccagagagatccatcagttcaacagggacgtggaggacgagatc
ttgtgggttggagagaggatgcctttggcaacttccacggatcacggccacaacctccag
accgtgcagctgttaataaagaaaaatcagaccctgcagaaggagatccagggccaccag
ccccgcatcgacgacatctttgagaggagccagaacatcgtcacggacagcagcctcaac
gccgaggccatccggcagaggctggccgacctgaagcagctgtggggcctcctcatcgag
gagacggagaagcggcaccggcggctggaggaggcgcacaaggcccagcagtactacttt
gacgcggccgaggccgaggcgtggatgagcgagcaggagctgtacatgatgtccgaggag
aaggccaaggatgagcagagcgccgtctccatgttgaagaagcaccagattctggaacaa
gccgtggaggactacgcggacacggtgcatcagctctccaagaccagccgggccctggtg
gccgacagccatcccgaaagtgagcgcatcagcatgcggcagtccaaggtggacaagctg
tacgcgggcctcaaggacctggccgaggagaggagaggcaagctggacgagaggcacagg
ctgttccagctcaaccgggaggtcgatgacctggagcagtggatcgccgagagggaggtg
gtcgcagggtcgcacgagctggggcaggactacgagcacgtcacgatgctacaagaacga
ttccgggaattcgcccgggacacagggaacattgggcaggagcgcgtggacacggtcaat
cacatggcagatgaactcatcaactctggacactcggatgccgccaccatcgccgagtgg
aaggacgggctcaacgaagcctgggctgacctcctggagctcatcgacacgaggacgcag
atcctcgccgcctcctatgaactgcacaagttttaccatgatgccaaggagatctttggg
cgcatccaggacaagcacaagaaactccccgaggagctcgggagagatcagaacacagtg
gagaccttacagaggatgcacaccacgtttgagcacgacatccaggctctgggcactcag
gtgagacagctgcaggaggatgcagcccgcctccaggccgcctatgcgggcgacaaggcc
gaggacatccagaagcgggagaacgaggtcctggaagcctggaaggccctgctggacgcc
tgcgagggccgcagggtgcggctggtggacacgggggacaagttccgcttcttcagcatg
gtgcgtgacctcatgctgtggatggaggatgtcatccggcagatcgaagcccaggagaag
ccacgggatgtgtcctctgtggagctattaatgaataaccatcaaggtatcaaagcagaa
atcgatgctcgtaatgacagtttcacgacctgcattgaacttgggaagtcgctgctggcg
aggaagcactacgcgtcagaggagatcaaggagaagttactgcagttgacggaaaagagg
aaagaaatgattgacaagtgggaagaccgatgggaatggttaagactgatcttggaggtc
catcagttctcaagggacgccagtgtggccgaggcctggctgctcggacaggagccctac
ctgtccagccgagaaataggccagagcgtggacgaggtggagaagctcatcaagcgccac
gaggcttttgaaaagtctgcagcgacctgggacgagaggttctccgccctggaaaggctg
acgacattggagctactggaagtgcgcagacagcaagaggaagaggagaggaagaggcgg
ccgccttctcctgagccgagctcgaaggtttccgaggagaccgagtcccagcagcagtgg
gatgcttcaaaaggagaacaagtttcccagaatggtttgccggctgaacagggatctcca
cggatggcagaaacggtggacacgagcgaaatggtcaatggcgctgcagaacagaggaca
agctcgaaagagtccagccccatcccctctcccacctccgagcgcaaagccaagactgcc
ctcccggcccagagtgctgccaccttgccggccaggacccaggagacgcctttggcccag
atggaaggcttcctgaatcggaagcacgagtgggaggcccacaataagaaggcctcaagc
aggtcctggcacaatgtttactgtgtcataaataaccaagaaatgggtttctacaaagat
gcaaagacagctgcttctggaattccctaccacagtgaggtccctgtgagtttgaaagaa
gccatctgtgaagtggcccttgattacaaaaagaagaaacacgtgttcaagctaagacta
aatgacggcaatgagtacctcttccaagccaaagacgatgaggaaatgaacacatggatc
caggccatctcctctgccatctcctccgataaacacgaggtgtccgccagcacccagagc
acgccagcatccagccgggctcagaccttgcccaccagcgtcgtcaccatcaccagcgag
tccagtcccggcaaacgggagaaggacaaagagaaagacaaagaaaagaggttcagcctt
tttggcaaaaagaagtga
DBGET
integrated database retrieval system
