Lipotes vexillifer (Yangtze River dolphin): 103091613
Help
Entry
103091613 CDS
T03090
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04510
Focal adhesion
lve04520
Adherens junction
lve04670
Leukocyte transendothelial migration
lve04810
Regulation of actin cytoskeleton
lve04820
Cytoskeleton in muscle cells
lve05100
Bacterial invasion of epithelial cells
lve05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103091613 (VCL)
04520 Adherens junction
103091613 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103091613 (VCL)
04810 Regulation of actin cytoskeleton
103091613 (VCL)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
103091613 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
103091613 (VCL)
09174 Infectious disease: parasitic
05146 Amoebiasis
103091613 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lve04812
]
103091613 (VCL)
04147 Exosome [BR:
lve04147
]
103091613 (VCL)
Cytoskeleton proteins [BR:
lve04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
103091613 (VCL)
Exosome [BR:
lve04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103091613 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
103091613
NCBI-ProteinID:
XP_007467565
UniProt:
A0A340Y7S9
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNKA
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG
IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVVDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKPGNPAAKVGISAVAEADAADAVGSPVPPDMEDDYEPELLLMPSSQ
PVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAK
DIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNIS
DEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcatacgcgcacgattgagagcattctggagccggtggcgcagcagatc
tcgcacctggtgatcatgcacgaggaaggcgaggtggacggcaaagccatccctgacctc
accgcgcctgtggccgccgtgcaggcggccgtcagtaacctcgttcgggttggaaaagag
actgttcaaaccactgaggatcagattttgaagagagatatgccaccagcatttattaag
gtggagaatgcttgcaccaagcttgtccaggcagcccagatgcttcagtcagacccttac
tcagtgcctgctcgagattatctaattgatggatcaaggggcatcctctccggcacatca
gacctgctcctcaccttcgacgaggctgaggttcgtaaaattattagagtttgcaaagga
attttggaatatcttacagtggcagaggtggtggaaactatggaagatttggtcacttac
acaaagaatcttggaccaggaatgactaagatggccaagatgattgatgagaggcagcag
gaactgactcaccaggagcaccgagtgatgttggtgaactcaatgaacaccgtgaaagag
ttgctgccagttctcatttcagctatgaagatttttgtaacaactaaaaactcaaaaaac
caaggaattgaagaagctttgaaaaatcgtaattttactgtagaaaagatgagcgctgaa
attaatgagatcattcgtgtattacaactcacttcttgggacgaagatgcctgggccagc
aaggacactgaagccatgaagagagcgttggcctccatagactccaaactgaaccaggct
aaaggttggctccgtgaccccagtgcctccccaggtgatgctggtgaacaggccatcaga
cagatcttagatgaagctggaaaagttggtgaactctgtgcaggcaaagaacgcagggag
atcctgggaacctgcaaaatgctagggcagatgactgatcaagtggctgacctccgagcc
agaggacaaggagcctcaccggtggccatgcagaaagcccagcaggtgtctcagggtctg
gatgtgctcacagcaaaagtggaaaatgcagcccgcaagctggaagccatgaccaactca
aagcagagcattgcgaagaagattgatgctgctcagaattggcttgcagatccaaatggt
ggaccagaaggagaagaacagattcgaggggctttggctgaagctcggaaaatagcagaa
ttatgtgatgatcctaaagagagagatgacattctacgttctcttggagaaatatctgct
ctgacttctaaattagcagatctacgaagacagggaaaaggagattccccagaggcccga
gcattggccaaacaggtggccacggccctacagaacttgcagaccaaaaccaacaaggct
gtggccaacagcagacctgccaaagcagctgtccaccttgagggcaagattgagcaggca
cagcggtggattgataatcccacagtggatgaccggggagttggtcaggctgccatccga
gggcttgtggctgaaggtcatcgtctggcaaatgtcatgatggggccttatcgccaagat
cttcttgcaaagtgtgaccgagtggaccagctgactgcccagctggctgacctggctgcc
agaggggaaggggagagtcctcaggcgagagcccttgcatctcagctccaagactcttta
aaggatctgaaagcccggatgcaggaggccatgacccaggaggtgtcagatgttttcagt
gatactacaactcccatcaagctgttggcagtggcagccactgcccctcctgatgcaccc
aatagggaagaggtatttgatgagagggcagctaactttgaaaaccattcaggaaggctt
ggggccacggcagagaaggcggctgctgttggaactgctaataaatcaacggtggaaggc
attcaggcctcagtgaagacagcccgagaactcacaccccaggtcgtctcagcggctcgc
atcttacttaggaatcccggaaatcaagctgcttatgaacattttgagaccatgaagaac
cagtggatcgataatgttgaaaaaatgacagggctggtggacgaagccattgacaccaaa
tctctgttggatgcttccgaagaagcaattaaaaaagacctggacaagtgtaaagtcgcc
atggccaatattcagcctcagatgctggtcgctggggcaaccagcattgctcgtcgggcc
aaccggatcctgctggttgctaagagggaggtggagaactctgaggatcccaagttccga
gaggccgtgaaagccgcctctgacgaattgagcaaaaccatctccccaatggtggtggat
gcaaaggctgtggcaggaaacatttctgaccctggcctgcaaaagagcttcctggactcg
ggatatcggatcctgggagcagtggccaaggtcagagaagccttccaacctcaggagcct
gacttcccgcctcctccgccagaccttgaacagctccgactgacagatgagcttgctcct
cccaaaccacctctgcctgagggtgaggtccctcctcccaggcccccaccaccagaggag
aaggatgaagagttccctgagcagaaagctggggaggtgattaaccagccaatgatgatg
gctgccaggcagctccatgatgaagctcgcaaatggtccagcaagccaggtaacccagcc
gctaaggtgggtataagtgctgtagctgaggcagatgcggctgacgctgttgggtcccct
gtcccccctgacatggaagacgattacgaacctgagctgctgttaatgccatccagtcag
ccggtcaaccagcccattctggcagcggctcagtcattgcatcgggaagctaccaagtgg
tctagtaagggcaatgacatcattgcagcagccaagcgcatggctctgctgatggctgag
atgtctcggctggtcagagggggcagcggtaccaagcgggcactgattcagtgtgccaag
gacatagccaaggcctcagatgaggtgactcggttggccaaggaggttgccaagcagtgc
acagataagcggattagaaccaacctcttacaggtatgcgagcgaatcccaaccataagc
acccagctcaaaatcctgtccacggtgaaggccaccatgctgggccggaccaacataagc
gacgaggagtctgagcaggccacagagatgctggttcacaatgcccagaacctcatgcag
tctgtgaaggagactgttcgagaagcagaagcagcttcaatcaaaattcgaacagatgct
gggtttacactgcgctgggttagaaagactccctggtaccagtag
DBGET
integrated database retrieval system
