Lipotes vexillifer (Yangtze River dolphin): 103091674
Help
Entry
103091674 CDS
T03090
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04151
PI3K-Akt signaling pathway
lve04382
Cornified envelope formation
lve04510
Focal adhesion
lve04512
ECM-receptor interaction
lve04518
Integrin signaling
lve04820
Cytoskeleton in muscle cells
lve04926
Relaxin signaling pathway
lve04933
AGE-RAGE signaling pathway in diabetic complications
lve04974
Protein digestion and absorption
lve05146
Amoebiasis
lve05165
Human papillomavirus infection
lve05200
Pathways in cancer
lve05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103091674 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103091674 (COL4A5)
04518 Integrin signaling
103091674 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103091674 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103091674 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
103091674 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
103091674 (COL4A5)
09158 Development and regeneration
04382 Cornified envelope formation
103091674 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103091674 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
103091674 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103091674 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
103091674 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103091674 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lve04147
]
103091674 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
lve00536
]
103091674 (COL4A5)
Exosome [BR:
lve04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103091674 (COL4A5)
Glycosaminoglycan binding proteins [BR:
lve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103091674 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103091674
NCBI-ProteinID:
XP_007463729
UniProt:
A0A340XWN7
LinkDB
All DBs
Position
Unknown
AA seq
1688 aa
AA seq
DB search
MKLRGVSLAAGLFLLALSLWGQPAEAAACYGCSPGSKCDCSGIKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGSDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGFPGPPG
IQGPAGPTGIPGPIGPLGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGLPGDQGPPGPPGIRGPPGPPGGVKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDIGPTGPPGLVIPRPGTGVTVGEKGN
IGLPGLPGEKGERGFPGIQGPPGLPGPPGLAVTGPPGPPGFPGERGQKGDEGPPGISIPG
SPGLDGQPGAPGLPGPPGPPGPPGPHIPPSDEVCEAGPPGPPGSPGDRGLQGEQGVKGDK
GDTCFNCIGTGVSGPPGEPGLPGLPGPPGSLGFPGQKGEKGHAGATGPKGVTGIPGAPGA
PGFPGPKGERGDILTFPGMKGDKGDLGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGIA
FKGERGPPGNPGLPGLPGNRGPMGPLGFGPPGPPGEKGIQGVAGNTGQPGIPGPKGDPGQ
TITQPGKPGLPGNPGRDGEVGLPGEPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGF
PGIPGPPGAPGTPGRIGLEGPSGPPGFPGLKGEPGFGLPGPPGPPGLPGFKGIIGPKGDR
GFPGPQGPPGQAGLDGLPGPKGDIGPNGQPGTMGPPGLPGTGVQGPPGPPGIPGPIGQPG
LHGIPGEKGDPGPPGFDVPGPPGERGSPGIPGAPGPMGPPGSPGLPGKAGASGFPGAKGE
MGMMGPPGPTGPLGIPGRSGVPGLKGDDGLQGQPGLPGPAGEKGSKGEPGLPGLPGPIDP
DLLGSKGEKGDAGLPGIPGVAGPKGYQGLPGDPGQPGLSGQPGLPGPSGPKGNPGLPGKP
GLTGPPGLKGNLGDMGFPGPQGAKGSPGPPGVPGQPGSPGLPGQKGEKGDPGISGIGLPG
LPGPKGEPGLPGYPGNPGIKGAVGDTGLPGLPGTPGAKGQPGLPGFPGTPGLPGPKGING
PPGNPGLPGEPGPVGGGGRPGPPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGIPGPPGL
PGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGLQGPPGPPGSPGPALEGPKGNPGPQ
GPPGRPGLPGPEGPRGLPGIGGIKGERGNPGQPGQPGLSGLKGDQGPPGLQGNPGRPGLN
GMKGDPGLPGVPGFPGMKGPSGEPGSTGPEGDPGLIGPPGPPGLPGPSGQSIVIKGDTGP
PGVPGQPGLKGLPGLPGPQGLPGPIGPPGDPGRSGLPGFDGAGGHKGDPGLPGQPGIRGL
DGPPGPDGLQGPPGPPGISSVAHGFLITRHSQTTDAPQCPQGTIQVYEGFSLLYVQGNKR
AHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKGQSI
QPFISRCAVCEAPAVVIAVHSQTIQIPRCPQGWDSLWIGYSFMMHTSAGAEGSGQALASP
GSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTRISR
CQVCMKRT
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcagcctggctgccggcttgttcttactggccctgagtctttgg
gggcagcccgcagaggctgcggcttgctatgggtgttctccaggatcaaagtgtgactgt
agtggtataaaaggagaaaagggggagagaggatttccaggtttggaaggccatccaggt
ttgcctggatttccaggtccagaagggccaccagggcctcggggacaaaagggtagtgat
ggaattccagggccaccaggaccaaaagggatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggggccccaggacctcaaggt
atccccggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttcct
ggtttacagggtcctccaggacctcctgggatcccaggtatgaagggagaaccaggtagt
ataattatgtcgtcactgccagggccaaagggtaatccaggatttcccggtcctcctgga
atacaaggcccagctggtcccactggtataccagggccaattggtcccctaggaccacca
ggtttgatgggcccacctggcccaccaggacttccaggaccaaaggggaatatgggctta
aatttccagggacccaagggtgagaagggtgagcaaggtcttcagggcccccctgggcca
cctgggcagatcagtgaacagaaaagaccaattgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccaagggcctcctggacctccagggatacgtggtcctccaggtcct
ccaggtggtgtgaaaggtgagaagggtgagcaaggagagcctggcaaaagaggtaaaccg
ggcaaagatggagagaatggccaaccaggaattccaggtttgcctggtgatcctggttac
cctggtgaaccaggaagggatggagaaaagggccaaaaaggtgacattggcccaactggg
cctcctggacttgtaattcctaggcctggaactggtgtaactgtaggagaaaaaggaaac
attgggttacctggcttgcctggagaaaaaggagagcgaggatttcctggaatacagggt
ccacctggccttcctggacctccaggacttgcagttacaggtcctcctgggccccctggc
tttcctggggaaaggggccagaaaggtgatgaaggtccacctggaatttccattcctgga
tctcctggacttgatggacagcctggggctcctggccttccagggcctccagggcctcct
ggccctcctggccctcacatccctcccagtgatgaggtatgtgaagcaggccctcctggc
cctccaggatctccaggtgatagaggactccaaggagaacaaggagtgaaaggtgacaaa
ggtgacacctgcttcaactgtattggaactggtgtttcagggcctccaggtgaacctggt
ttgccaggtcttccaggtcccccaggatctcttggtttccctggacagaagggtgaaaaa
ggacacgctggtgcaaccggtcccaaaggagtaacaggcataccaggagctccaggcgct
ccaggctttcccggacctaaaggtgaacgtggtgacatcctcacttttccaggaatgaag
ggtgacaaaggagatttgggttctcctggagctccagggcttcctggtttacctggcacc
cctggacaggatggattgccaggacttcctggccccaaaggagaacctggtggaattgct
tttaagggtgaaagaggtccccctgggaacccaggtttgccaggtctcccaggaaatagg
gggcctatgggccctcttggttttggccctccaggcccaccaggtgagaaaggcatacaa
ggtgtagcaggaaatacaggccagccaggaataccaggtcctaaaggtgatccaggtcag
accataacacagccagggaagcctggcttgcctggtaacccaggcagagatggtgaagta
ggtcttccaggtgaacctggactcccaggccagccaggcttgccaggtatacctggtagc
aaaggagaaccaggtatccctggaattgggcttcctggaccacctggtcccaaaggtttc
cctggaattccaggacctccaggagcacctgggacacctggaagaattggtctagaaggt
ccttctgggccaccaggctttccaggactgaagggagaaccaggatttgggctacctggg
ccacctgggcctccaggactcccaggtttcaaaggaataattggtccaaaaggggatcgt
ggtttcccaggacctcaaggtcctccaggacaagctggcttggatgggctacctggacca
aaaggtgacattggaccaaatggacaacctgggacaatgggacctcctgggctgccagga
acaggtgttcagggaccaccagggccaccaggaattcctggaccaataggtcaacctggc
ttgcatggaataccaggagagaagggggatccagggcctcctggatttgatgttccagga
ccccctggtgagagaggcagtccagggatccctggagcaccaggtcctatgggaccccca
ggatcaccagggctcccaggaaaagcaggtgcctctgggtttccaggtgccaaaggtgaa
atgggtatgatgggacctccaggcccaacaggacctttgggaattcctggcaggagtggt
gttcctggtctcaaaggtgatgatggtttgcagggtcagccaggacttcctggccctgca
ggagagaaaggtagtaaaggagagcctggccttccaggccttcctggaccaatagatcca
gatctgctgggctcaaaaggagagaaaggggacgctggcctaccgggtattcctggagtt
gcagggccaaaaggttatcagggtttgcctggagacccagggcaacctggactgagtgga
cagcctggattaccaggaccatcgggtcccaagggtaaccctggtctccctgggaaacca
ggacttacaggacctcctggacttaaaggaaacctaggtgatatgggttttccgggcccc
cagggtgcaaaagggtctcctggacctcctggagttcctggacaacctggatccccggga
ttacctggacagaaaggagaaaaaggtgatcctggtatttcaggcattggtcttccaggt
cttcctggcccaaagggtgaacctggtctgccgggatacccagggaaccccggtatcaaa
ggtgctgtgggagatactggtttgcctggattaccggggacccctggagcaaaaggacaa
ccaggccttcctggattccctggaaccccaggccttcctggaccaaaaggtattaatggt
cctcctgggaaccctggccttccaggagaacctggtcctgtaggtggtggaggtcgtcct
gggccaccagggcctccaggtgaaaaaggcaaaccaggtcaagatggtattcctggacca
gctggacagaagggtgaaccaggtcaaccaggctttggaatcccaggaccccctggactt
ccaggactttctggtcaaaagggtgatggaggattacctggcattccaggaaaccctggc
cttccaggtccaaagggtgaaccaggctttcatggtttccctggtctgcagggtccccca
ggccctcctggttctccaggtccagctctggaaggccctaaaggcaaccctgggccccaa
ggtcctccagggagaccaggtctaccaggtccagaaggtccccggggtctccctggaatt
gggggcattaaaggagagagaggaaacccgggccaacctgggcaacctggtttgtctggt
ttgaaaggagatcaaggaccaccagggctccagggtaatcctggccggccaggtctcaat
ggaatgaaaggagatcctggtctccctggtgttccaggatttccaggcatgaaaggaccc
agtggagaacctggttcaactggccctgagggggatccaggacttattggccccccaggc
ccccctggattacctggtccttcaggacagagtattgtaatcaaaggagatactggtcca
ccaggggttccaggccagcctggattaaaaggtctaccaggactaccaggacctcaaggt
ttaccaggtccaattggccctcctggagatcctggacgcagtggactccctggctttgat
ggtgcaggagggcacaaaggagacccaggtttaccaggccagccaggtatccgtggtttg
gatggtccccccgggccagatggattgcaaggtcccccaggtccccctggaatctcctct
gttgcccatggatttctcatcacacgtcacagccagacaacagatgcaccacaatgccca
cagggaactatccaggtttatgaaggcttttctctcctgtatgtacaaggaaataaaaga
gctcacggtcaagacttgggaacggccggcagctgccttcgtcgcttcagtaccatgcct
ttcatgttctgcaacatcaataatgtttgcaactttgcttcaagaaatgactattcttac
tggctttccaccccagagcccatgccaatgagcatggagcccctgaagggccagagcatc
cagccattcattagtcgatgtgcagtatgtgaagctccggccgtggtgattgcagttcac
agtcagaccatccagattccccgttgtcctcagggatgggattctctctggattggttat
tccttcatgatgcacacaagtgcaggggcagagggctcaggtcaagccctggcctcccct
ggttcctgcttggaagagtttcgttcagctcccttcattgagtgtcatgggcgggggacc
tgcaactattatgccaactcctacagcttttggctggcaactgtagatgtgtcagatatg
ttcagcaaacctcagtcagaaacgctgaaagcaggagacttgaggacacgtattagtcga
tgtcaagtgtgcatgaagaggacataa
DBGET
integrated database retrieval system
