Lytechinus variegatus (green sea urchin): 121405590
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Entry
121405590 CDS
T11173
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1-like
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lvg04990
]
121405590
Domain-containing proteins not elsewhere classified [BR:
lvg04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
121405590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
EIF3I
WDR55
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_WDR41
Beta-prop_ACSF4
Beta-prop_NWD2_C
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
WHD_NWD1
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
WD40_like
Beta-prop_IP5PC_F
NPHP3_N
KNTC1_N
PEP5_VPS11_N
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
PQQ_2
Beta-prop_Nup120_160
AAA_16
AAA_22
Beta-prop_EIPR1
WD40_RFWD3
AAA_7
DAP3
NB-ARC
AAA_19
Beta-prop_pof12
nSTAND_NTPase5
AAA
NACHT
ResIII
Beta-prop_IFT140_2nd
RuvB_N
AAA_11
NPHP3
MHC_I_3
TsaE
Mg_chelatase
nSTAND3
Mcl1_mid
Motif
Other DBs
NCBI-GeneID:
121405590
NCBI-ProteinID:
XP_041452454
LinkDB
All DBs
Position
18:complement(14293143..14328427)
Genome browser
AA seq
1644 aa
AA seq
DB search
MTLTKAKEMDSIFTGRLTNLPPLTSKVVKIILSCCKSDTIQERFVLLRDAVPELQRFCQQ
YGLDFQLVDMHQGPSNTSTNDHEMAGLRIQEIINSHQLSLGPFFVSIIGNKYGDYVLPSR
IEGTEFSHIRDCAFEAGKDINVLDEWYVQEGDGMEQVYVLQPISSKLKYYYDSSPENKEL
NEKDLAKWKKAHDALLEILQQCAEYVHDEGLLNEEQLHKYHMSALENELTSAVYQTENSA
ERCVCIYRSFDDLPQNVESQEMHNYVDIRKPNRPKIYKKAQERIKALKETKIPSMLPEEN
ILKFCIPWTANGIDPANSEEHEQYLKEFCGQFTSKIKELVDKFVVREKANLQMREGSGLT
GEVLAHLQVADEFTKSFVSRDSVVNQVERLVKKTQGKNDKLQNAILLHGEPGSGKTVVVS
QIIKMMPTWLGESVIVVPRFLGATTTCRTVRDMLESVCHQVYEVYKPKKSKFGDIPQDLE
KLKQYFKNLIEKLPSPTRPLCIVLDFPAEFVEEFQGDKLDWLPVNFPTSTTLIIALTDSP
AVKVFRERISDEANFIRVTSLNDRELSEMVRLFLTDNSRLLVPEQVKIVTRAGARHPLPL
FAKLLCRETQFMNPSGNGKDPISTPVDASNILLQHVEDRNGPEVTTIILRYLTAARYGLT
EAELMDLLSCDDDLLAMVYPHTLPRVLRFPHRVWINIRIDLGPLITIRYLDNKMLMTWSS
SVIHKVARQRYLSSNVESVKAHKYLSNLFLQTWLKGKKWERDDRKMEDNEEVDGNRYIAP
QPLLYGKTQYNLRRLSELWNHLANAGDLKMLKSAVVCNFEYLLAKTHASSVYHVLQELST
IRCLVLDLEIDLVYAALAKSAEALMADPLQLAAELISRLLPIKGQYPRDLDSLVAQAMEW
CDQFTRPLLVPLTSWLPTQHDSLITSVQCGREIVKMVVSTDNQQIIVTTNDRTLACYKLA
SSEKLWSCKAVHAEDVTCIAISKDDRIVVTGSADRTLKLWTADGGKLLRTIQKHDGPISC
VSVTPDCQRVISGALDGLVRVFNIEDGELVWNLTGSLESLVSVKSNKYSNILIAASADCK
VRTWSLRDFSQLNVIEGQGGIMTHMTVSGDDMFFLRSYEDSRLNMSCLVTGTFVHTLEGH
KGKIVDICMCPEGLYAGIATSEQVIYVYNVRSQELLQTLTGHSAPIRKVTITPNGHFLVS
ASADGNVKVWLLPKPKTKETDNTKAHTDKVTCLAMSRDANFAITGSSDCSLKLWNMDLCQ
IIHSFCDHTKPISCVAMADNGSFAVSGSEDTTVKVWSTDSGVVVIAFTEHEDAISSVLIT
SDSKRILSADFSNYMKLWLAATGEVLLSCMGPSAMVILTPDDTYAISGDRNELMKIWTTG
SGESVKTVNHVQIITCVTVTRDSQFTITGSEDMSLKIWETKTGKLTQILAGHDDRVTCVA
TADHNRHVISGSDDSTLIIWNMSTGEIEKTLQGHTAAVTGCKMTSDGSIAVSCSLDGTVR
VWLVQTGTLITSFHIRQPVAGLEMSFDASFIILRLVEGGSTPLLCLHNSPASDIKSQSQV
DIDVKEESQTVLPIKPHPPLLHKQTSLHMPQVGRKSTSSAPDANRIKAANNQKGRHQSYS
DNSSSNGSTGKMKRNKRSGVCRIV
NT seq
4935 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttaccaaagcaaaagagatggacagcattttcaccggccgtctgaccaaccta
ccgcccctgacatccaaggtggtcaagatcatactcagctgctgtaaatcagacaccata
caggagaggtttgttctattgcgagatgcggtccccgagttgcagaggttttgccagcag
tatggcctggatttccaattggttgatatgcaccaggggccgtccaacacgtcgaccaac
gaccacgagatggccggtctcaggatccaagaaatcatcaactcacatcagttgtctctg
ggaccgttctttgtgtcaataatcggcaacaagtatggtgattatgtgctgccctctaga
atcgaaggaacagaattcagtcatatccgagactgtgcttttgaagctggcaaagatatc
aatgtccttgatgagtggtacgtccaggaaggggatggaatggaacaggtctatgtcctg
caaccgatatcctcaaaactcaagtattactatgactcgagcccagagaacaaagaactc
aatgagaaggatttagcaaaatggaagaaagcccatgatgcattgcttgagatccttcaa
cagtgtgcggagtatgtgcacgatgaaggacttctcaacgaagaacaactccacaagtat
catatgtctgctcttgagaatgagttgacgagtgcagtttaccagacggaaaactctgcc
gagaggtgtgtgtgcatctaccgctccttcgatgatctcccgcagaatgtggagtcacag
gagatgcacaactatgtcgacattcgcaaacccaaccgtccaaagatatacaagaaggct
caggaacgcatcaaagcgctcaaggaaaccaagattccctctatgctgccagaggagaat
atcctcaagttctgcattccctggacggcgaacggcatcgaccctgctaactctgaagaa
catgaacagtacttgaaagaattctgtggacaattcacgtccaagatcaaggaattggtg
gacaagtttgttgtccgggagaaagccaatctgcagatgagggaaggatcgggactgact
ggggaggtcctggcacacctgcaggtggctgacgagttcaccaagagctttgtttcacga
gactctgtcgtcaaccaagttgagagactagtcaagaagacacaagggaaaaatgacaaa
ttgcagaatgctatattattgcatggtgagccaggaagcggtaagactgtagttgtgtct
cagattatcaaaatgatgccaacttggttaggggaatcagtcatcgttgtgccaagattc
cttggcgcaacaaccacatgtcgaactgttcgtgacatgcttgaatcagtatgccatcag
gtgtacgaagtatacaaacccaagaaaagcaaatttggtgacattccgcaagacctagaa
aagctcaaacagtactttaagaacttaatcgagaaactcccctccccaacgcgaccgctg
tgcattgtactggatttcccagcggagtttgtggaagaatttcaaggcgataaattagat
tggctccccgtgaatttcccaacgtccaccaccctcatcatagccctgaccgatagcccc
gctgtcaaggtattccgggaacgaatctcggacgaagccaactttatcagggttacatcc
ctcaatgacagggagctctcggagatggtgcggctgttcttgacggacaacagccgactc
ctggtgcccgagcaagtgaaaatcgtcacaagggcaggcgcgaggcaccccctgccgttg
tttgccaagttgctatgcagagagactcagtttatgaatccatcggggaatggtaaagat
cccatctcaacccctgtggatgcatccaacattctgctgcagcacgtagaagacaggaac
ggaccagaagtgaccactattattctaaggtacttaacagcagctaggtatggtctaact
gaagcagagttgatggatctactgtcttgcgatgacgatctcctggccatggtctaccct
catacgctaccacgtgtcctgaggtttccacatagagtctggatcaacatcaggattgac
ttaggtcccctgataaccatccgttaccttgacaacaagatgctgatgacgtggtccagc
tccgtcatacacaaggtggctcgtcagcgatacctcagctccaacgtggaaagcgtcaaa
gctcacaagtatttgtcaaacctattcttgcagacatggctgaaaggcaagaagtgggaa
cgagacgatcgtaagatggaagataatgaggaggtcgacgggaacaggtacatcgcccct
cagcctctcctctatggaaagactcaatacaacctgagaaggctgagtgaactctggaat
catctagccaatgctggtgacctcaagatgctaaaatcggccgttgtgtgcaatttcgag
tacctccttgccaagacccatgcctcatcggtctaccacgtcctgcaggaactgtcgacg
atcagatgcctagtcctggacctagagatagacctggtctatgcagctctggccaagtct
gccgaggccctgatggcagatcctcttcagcttgctgcggagctgattagtagacttctg
cctatcaagggtcagtatcctcgagatctagactctctggttgctcaagcaatggagtgg
tgtgaccaattcacccgccccctcctcgttcctctaacatcctggctccccacccagcac
gactccctcatcacgtcagttcagtgcggccgagagatcgtcaagatggtggtgtccacc
gacaaccaacagatcatcgtcaccaccaacgaccgaacccttgcctgctacaagcttgcc
tccagcgagaagctctggtcctgcaaggcggtccacgccgaggacgtcacctgcatcgcc
atctccaaggacgaccgcatcgtcgtcacagggtctgccgataggacgctcaagctgtgg
acagccgatggtgggaagcttctgaggacaatccagaagcacgacggacctatctcctgc
gtgtctgtgacacctgactgccagagggtgatcagcggtgccctggatggacttgtcagg
gtgttcaacatcgaggacggggaactggtctggaacctgacagggtcgttggagtcattg
gtgtctgtcaagtctaacaagtacagcaatatcttgatcgcagcatctgctgattgcaaa
gtgcggacatggagccttcgtgatttctctcagcttaatgtgatagaaggccagggcggt
atcatgacccatatgactgtctcgggagatgacatgttctttttaagatcttacgaggat
tcacgtctgaacatgtcttgcttggtgacggggacatttgtacataccctggagggtcat
aagggaaagattgtagacatctgcatgtgtccagaaggcctctatgcgggcatagcaacg
tccgaacaggtcatctacgtctacaacgtccgatctcaggagcttctacagacactgacc
ggtcactctgctccgatccgtaaagtgaccattaccccgaatggtcacttcttggtctcg
gcctcggcagatggaaatgttaaggtctggttgctgcccaagccaaagactaaggagaca
gataatacaaaggcccatacagacaaggtcacatgtcttgccatgtctcgggatgcaaac
tttgccatcactggttcatccgactgttcactgaagctgtggaacatggatctgtgtcaa
atcatccattcattctgcgatcacacaaaaccaatctcgtgcgtcgctatggcggataac
ggaagcttcgctgtgtcaggttctgaggataccactgtcaaagtatggagtacggacagc
ggtgtcgtcgtcatcgcattcaccgagcacgaagatgccatatcttcagtgctcatcaca
tccgacagcaagcggatactgtctgccgatttcagcaactacatgaaactatggttggct
gctacgggagaggttttgttatcgtgtatgggtccttctgccatggttatcctgacgcct
gatgatacttacgcaatcagcggagatcggaatgaacttatgaagatctggaccactggt
agtggagaatcggtcaaaacagtcaaccatgttcagataattacatgtgtgacagtgacc
agggatagtcagtttacaatcactggttctgaagatatgtctctgaagatctgggagaca
aagactggcaaactcactcagatcttagcaggtcatgacgaccgcgtgacctgcgtagct
acagcagatcacaaccgccacgtcatatcagggtccgatgactccacccttatcatctgg
aacatgtcaacaggagagatagagaagaccctacagggccacaccgctgcggtgactggc
tgcaagatgacaagcgatggcagcattgcagtatcatgttcattggatggcacggtcagg
gtgtggctggtccagacgggaaccctcatcacctcctttcacatccgtcaaccggtggct
ggtcttgagatgtccttcgatgcaagcttcatcatcctgagactggtagaagggggaagc
acccctctcctctgtcttcataacagccctgcctccgatatcaagtctcagagccaggtc
gatattgatgtcaaagaagaatctcagacagtactaccgatcaagcctcacccgccgctg
ctccacaaacaaacctcactgcacatgcctcaggtcggccgcaagtcaacaagctccgcc
cccgacgccaaccgcatcaaagccgccaacaaccagaaaggacgccatcagagttactcg
gacaacagctccagcaacggctccacgggcaaaatgaaaaggaacaaacgatcgggcgtc
tgccgtatcgtgtag
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integrated database retrieval system
