Lytechinus variegatus (green sea urchin): 121405842
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Entry
121405842 CDS
T11173
Name
(RefSeq) small nuclear ribonucleoprotein E-like
KO
K11097
small nuclear ribonucleoprotein E
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121405842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121405842
03041 Spliceosome [BR:
lvg03041
]
121405842
03032 DNA replication proteins [BR:
lvg03032
]
121405842
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
121405842
Spliceosome [BR:
lvg03041
]
Complex A
U1 snRNP components
Sm proteins
121405842
U2 snRNP components
121405842
Complex B
U1 snRNP components
121405842
U4/U6.U5 tri-snRNP components
121405842
Complex C
U2 snRNP components
121405842
DNA replication proteins [BR:
lvg03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
121405842
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
121405842
NCBI-ProteinID:
XP_041452745
LinkDB
All DBs
Position
19:5650890..5660463
Genome browser
AA seq
92 aa
AA seq
DB search
MAYKGQKVQKVMVQPINLIFRYLQNRSRVQIWLYDQSNLRIEGHIIGFDEYMNVVLDDAE
EYHKKNKTRKPLGRILLKGDNITLIQNVQQAA
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtataaagggcagaaggtccagaaagtgatggtccaaccgattaatttaattttc
agatatcttcagaataggtcaagagttcagatctggttgtacgaccaatcaaatctcagg
atcgaagggcatatcattggttttgatgaatacatgaatgtagtactagatgatgcagag
gagtatcacaagaagaacaagacaagaaaaccacttggacggatattactgaaaggggac
aacatcacattgattcagaatgtccagcaggctgcgtag
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