Lytechinus variegatus (green sea urchin): 121405869
Help
Entry
121405869 CDS
T11173
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase-like
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00601
Glycosphingolipid biosynthesis - lacto and neolacto series
lvg01100
Metabolic pathways
Module
lvg_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
121405869
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lvg01003
]
121405869
Enzymes [BR:
lvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
121405869
Glycosyltransferases [BR:
lvg01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
121405869
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
Motif
Other DBs
NCBI-GeneID:
121405869
NCBI-ProteinID:
XP_041452781
LinkDB
All DBs
Position
1:2475383..2478571
Genome browser
AA seq
348 aa
AA seq
DB search
MAVLNISRRKSLMLLINVLGIIGLFIFQSIWYQEVHMESLIMPRSAINKSVIKNMHATDI
SHSERRTSMPLLGWRKNVNWRPGAKLDIYNFLINPVEKCKIGKDNNITLLVLVKSAPGNI
QRRDAARRTYIKGAENVNLPARVVFILGESESQEERDDVYMESETHADILRVGFLDHYYN
LTIKLIMGFKWMINYCSSEFLMTMDDDVVIDIVTLVNDLNAIPKSDRSQMVIGTRGVGYK
PHRNSESKWYVPEEFYPEKTYPPFPFGHGYVISQDVVLKLFLISRETPSLVPFDDVYCGI
LLNKMGIKIIHRPQWYRDRHPTEKNHDYLKIEVPAQNMDKAWEEFRRN
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggccgtattgaatatttcacgacgtaaatcattgatgcttttgataaacgttttgggc
ataattggattattcatcttccaaagtatatggtatcaagaagtacatatggaaagtttg
ataatgccaagaagtgcaattaacaaaagcgtgattaaaaatatgcatgcaaccgacata
tctcattcagaacgaagaacttcgatgcccctcctcggttggaggaaaaatgtaaactgg
agaccaggagctaagttagatatatataattttcttatcaaccctgttgaaaaatgcaag
atcggaaaggacaacaatatcacgttacttgttttagtaaagtctgcaccgggaaatatc
caacgcagagatgctgccagacggacgtatataaaaggggcagaaaatgttaacctgcca
gccagagtggtgtttatattgggggaatcggaatcgcaggaggaaagagatgatgtttat
atggagtctgaaacacatgcagacatcctgagagtaggcttcctggatcattattataac
ctgactataaagctcattatggggtttaagtggatgattaactactgtagtagtgagttt
ttgatgacgatggatgatgacgtggtgattgatatagtaacactggtcaacgacctcaac
gcgataccaaaatcggatcgctctcagatggtaatcggaacaaggggagttggttataaa
ccacaccgaaacagtgaaagcaaatggtatgtacctgaagagttctacccagaaaagacg
tatcccccctttccatttggacatgggtatgttatatcacaggatgttgtgttaaaactg
tttctgatttcccgagaaacaccctcattggtaccgtttgacgacgtgtattgtggtata
ttattgaacaagatgggcatcaaaattattcaccgaccacaatggtacagagatcgacat
ccgacagagaaaaatcatgattacttaaagattgaagtaccagcgcaaaacatggataaa
gcttgggaggagtttcgaagaaactaa
DBGET
integrated database retrieval system
